RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W PRE4P30657 266 aa1.88□□□□□ -2.11
SGF11YPL047W PBP2P38151 413 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
SGF11YPL047W FLO5P38894 1075 aa1.88□□□□□ -2.11
SGF11YPL047W FTR1P40088 404 aa1.88□□□□□ -2.11
SGF11YPL047W CFD1P40558 293 aa1.88□□□□□ -2.11
SGF11YPL047W IRC7P43623 340 aa1.88□□□□□ -2.11
SGF11YPL047W SAP4P53036 818 aa1.88□□□□□ -2.11
SGF11YPL047W ORC1P54784 914 aaPredicted RBP1.88□□□□□ -2.11
SGF11YPL047W RPN4Q03465 531 aa1.88□□□□□ -2.11
SGF11YPL047W HLR1Q04429 423 aa1.88□□□□□ -2.11
SGF11YPL047W SPN1Q06505 410 aaPredicted RBP1.88□□□□□ -2.11
SGF11YPL047W SNA4Q07549 140 aa1.88□□□□□ -2.11
SGF11YPL047W SRL1Q08673 210 aa1.88□□□□□ -2.11
SGF11YPL047W HOP1P20050 605 aa1.87□□□□□ -2.11
SGF11YPL047W CCL1P37366 393 aa1.87□□□□□ -2.11
SGF11YPL047W DUN1P39009 513 aa1.87□□□□□ -2.11
SGF11YPL047W OAF1P39720 1047 aaPredicted RBP1.87□□□□□ -2.11
SGF11YPL047W TDA10P42938 290 aa1.87□□□□□ -2.11
SGF11YPL047W ENP2P48234 707 aaKnown RBP1.87□□□□□ -2.11
SGF11YPL047W TAF4P50105 388 aa1.87□□□□□ -2.11
SGF11YPL047W COP1P53622 1201 aaKnown RBP1.87□□□□□ -2.11
SGF11YPL047W RPS15Q01855 142 aaKnown RBP1.87□□□□□ -2.11
SGF11YPL047W STP4Q07351 490 aa1.87□□□□□ -2.11
SGF11YPL047W AIM41Q12032 185 aa1.87□□□□□ -2.11
SGF11YPL047W RPS17AP02407 136 aaKnown RBP1.86□□□□□ -2.11
SGF11YPL047W YER190C-BP0CX94 160 aa1.86□□□□□ -2.11
SGF11YPL047W YEL077W-AP0CX95 160 aa1.86□□□□□ -2.11
SGF11YPL047W YGR296C-BP0CX96 160 aa1.86□□□□□ -2.11
SGF11YPL047W YPL283W-BP0CX97 160 aa1.86□□□□□ -2.11
SGF11YPL047W YPR204C-AP0CX98 160 aa1.86□□□□□ -2.11
SGF11YPL047W RPS17BP14127 136 aaKnown RBP1.86□□□□□ -2.11
SGF11YPL047W ATO2P32907 282 aa1.86□□□□□ -2.11
SGF11YPL047W TDA3P38758 523 aa1.86□□□□□ -2.11
SGF11YPL047W SAE2P46946 345 aa1.86□□□□□ -2.11
SGF11YPL047W MET13P53128 600 aa1.86□□□□□ -2.11
SGF11YPL047W NSE5Q03718 556 aa1.86□□□□□ -2.11
SGF11YPL047W SCW10Q04951 389 aa1.86□□□□□ -2.11
SGF11YPL047W NDD1Q08887 554 aa1.86□□□□□ -2.11
SGF11YPL047W SWI6P09959 803 aa1.85□□□□□ -2.11
SGF11YPL047W YEL076C-AP0CX16 216 aa1.85□□□□□ -2.11
SGF11YPL047W YLR464WP0CX17 216 aa1.85□□□□□ -2.11
SGF11YPL047W YPT10P38146 199 aa1.85□□□□□ -2.11
SGF11YPL047W CDS1P38221 457 aa1.85□□□□□ -2.11
SGF11YPL047W MTG2P38860 518 aa1.85□□□□□ -2.11
SGF11YPL047W YEL076CP39971 216 aa1.85□□□□□ -2.11
SGF11YPL047W YIR016WP40572 265 aa1.85□□□□□ -2.11
SGF11YPL047W BUD6P41697 788 aa1.85□□□□□ -2.11
SGF11YPL047W MDV1P47025 714 aa1.85□□□□□ -2.11
SGF11YPL047W LYS20P48570 428 aaKnown RBP1.85□□□□□ -2.11
SGF11YPL047W NOP15P53927 220 aaPredicted RBP1.85□□□□□ -2.11
SGF11YPL047W BOP3P53958 396 aa1.85□□□□□ -2.11
SGF11YPL047W POB3Q04636 552 aaKnown RBP1.85□□□□□ -2.11
SGF11YPL047W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
SGF11YPL047W AHA1Q12449 350 aaKnown RBP1.85□□□□□ -2.11
SGF11YPL047W YCP4P25349 247 aaKnown RBP1.84□□□□□ -2.11
SGF11YPL047W COQ3P27680 312 aa1.84□□□□□ -2.11
SGF11YPL047W EHT1P38295 451 aa1.84□□□□□ -2.11
SGF11YPL047W PRM2P40534 656 aa1.84□□□□□ -2.11
SGF11YPL047W RET2P43621 546 aa1.84□□□□□ -2.11
SGF11YPL047W YNL058CP53947 316 aa1.84□□□□□ -2.11
SGF11YPL047W AAT1Q01802 451 aa1.84□□□□□ -2.11
SGF11YPL047W USA1Q03714 838 aa1.84□□□□□ -2.11
SGF11YPL047W HRD3Q05787 833 aa1.84□□□□□ -2.11
SGF11YPL047W ARR3Q06598 404 aa1.84□□□□□ -2.11
SGF11YPL047W YCG1Q06680 1035 aa1.84□□□□□ -2.11
SGF11YPL047W GRS2Q06817 618 aa1.84□□□□□ -2.11
SGF11YPL047W AAC1P04710 309 aa1.83□□□□□ -2.12
SGF11YPL047W AIM17P23180 465 aaKnown RBP1.83□□□□□ -2.12
SGF11YPL047W SCO2P38072 301 aa1.83□□□□□ -2.12
SGF11YPL047W YHR033WP38690 423 aa1.83□□□□□ -2.12
SGF11YPL047W LRO1P40345 661 aa1.83□□□□□ -2.12
SGF11YPL047W YGL260WP53056 76 aa1.83□□□□□ -2.12
SGF11YPL047W RPL15BP54780 204 aaPredicted RBP1.83□□□□□ -2.12
SGF11YPL047W YTH1Q06102 208 aaPredicted RBP1.83□□□□□ -2.12
SGF11YPL047W NTG2Q08214 380 aa1.83□□□□□ -2.12
SGF11YPL047W PCL8Q08966 492 aa1.83□□□□□ -2.12
SGF11YPL047W TUF1P02992 437 aaKnown RBP1.82□□□□□ -2.12
SGF11YPL047W YPK1P12688 680 aaKnown RBP1.82□□□□□ -2.12
SGF11YPL047W YJU2P28320 278 aaPredicted RBP1.82□□□□□ -2.12
SGF11YPL047W SEC65P29478 273 aa1.82□□□□□ -2.12
SGF11YPL047W RPT3P33298 428 aaKnown RBP1.82□□□□□ -2.12
SGF11YPL047W MNN1P39106 762 aa1.82□□□□□ -2.12
SGF11YPL047W YJL193WP39542 402 aa1.82□□□□□ -2.12
SGF11YPL047W IES1P43579 692 aa1.82□□□□□ -2.12
SGF11YPL047W YNL193WP53870 558 aa1.82□□□□□ -2.12
SGF11YPL047W SNU56Q03782 492 aaKnown RBP1.82□□□□□ -2.12
SGF11YPL047W CYK3Q07533 885 aa1.82□□□□□ -2.12
SGF11YPL047W YLR001CQ07895 862 aa1.82□□□□□ -2.12
SGF11YPL047W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12 RIP-Chip
SGF11YPL047W ATX2Q12067 313 aa1.82□□□□□ -2.12
SGF11YPL047W UBX3Q12229 455 aa1.82□□□□□ -2.12
SGF11YPL047W PNO1Q99216 274 aaKnown RBP1.82□□□□□ -2.12
SGF11YPL047W PHO2P07269 559 aa1.81□□□□□ -2.12
SGF11YPL047W ILS1P09436 1072 aaKnown RBP1.81□□□□□ -2.12
SGF11YPL047W GLN4P13188 809 aaKnown RBP1.81□□□□□ -2.12
SGF11YPL047W BET2P20133 325 aa1.81□□□□□ -2.12
SGF11YPL047W VPS33P20795 691 aa1.81□□□□□ -2.12
SGF11YPL047W RTT107P38850 1070 aa1.81□□□□□ -2.12
SGF11YPL047W CKB2P38930 258 aa1.81□□□□□ -2.12
SGF11YPL047W SDA1P53313 767 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms