RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	SVF1	Q05515	481 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	TMA46	Q12000	345 aa	Known RBP	4.06	□□□□□ -1.76
NCR1	YPL006W	MDM20	Q12387	796 aa	Known RBP	4.06	□□□□□ -1.76
NCR1	YPL006W	GAL10	P04397	699 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	TIF1	P10081	395 aa	Known RBP	4.06	□□□□□ -1.76
NCR1	YPL006W	FRE1	P32791	686 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	TGL4	P36165	910 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	VID24	P38263	362 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	SEC27	P41811	889 aa	Known RBP	4.06	□□□□□ -1.76
NCR1	YPL006W	DIM1	P41819	318 aa	Known RBP	4.06	□□□□□ -1.76
NCR1	YPL006W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	RIP-Chip
NCR1	YPL006W	POL31	P46957	487 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	CCT8	P47079	568 aa	Known RBP	4.06	□□□□□ -1.76
NCR1	YPL006W	DOS2	P54858	310 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	YDR476C	Q03362	224 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	DIS3	Q08162	1001 aa	Known RBP	4.06	□□□□□ -1.76
NCR1	YPL006W	AIM39	Q08223	395 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	YIG1	Q08956	461 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	PCD1	Q12524	340 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	ENO1	P00924	437 aa	Known RBP	4.05	□□□□□ -1.76
NCR1	YPL006W	RPL4A	P10664	362 aa	Known RBP	4.05	□□□□□ -1.76
NCR1	YPL006W	GAL2	P13181	574 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	SNT1	P25357	1226 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	VPH2	P32341	215 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	MMS4	P38257	691 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	CKB2	P38930	258 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	ULI1	P43604	169 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	FAR3	P46671	204 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	RPL4B	P49626	362 aa	Known RBP	4.05	□□□□□ -1.76
NCR1	YPL006W	MND1	P53102	219 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	YNL247W	P53852	767 aa	Known RBP	4.05	□□□□□ -1.76
NCR1	YPL006W	SHS1	Q07657	551 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	SGT2	Q12118	346 aa	Known RBP	4.05	□□□□□ -1.76
NCR1	YPL006W	YRR1	Q12172	810 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	RUP1	Q12242	671 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	MST1	P07236	462 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	TUB1	P09733	447 aa	Known RBP	4.05	□□□□□ -1.76
NCR1	YPL006W	MPH2	P0CD99	609 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	GPA2	P10823	449 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	TYR1	P20049	452 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	SAN1	P22470	610 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	AMS1	P22855	1083 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	CYM1	P32898	989 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	BCK2	P33306	851 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	IXR1	P33417	597 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	OCT1	P35999	772 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	ABZ1	P37254	787 aa	Predicted RBP	4.05	□□□□□ -1.76
NCR1	YPL006W	FRT2	P39734	528 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	SSP120	P39931	234 aa	Known RBP	4.05	□□□□□ -1.76
NCR1	YPL006W	YPR003C	P53394	754 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	YTP1	P53584	459 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	YNL108C	P53929	270 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	YMR209C	Q03648	457 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	YMR160W	Q03823	816 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	INP2	Q03824	705 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	ADY3	Q07732	790 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	GPI13	Q07830	1017 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	ZPS1	Q12512	249 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	COX4	P04037	155 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	MSB1	P21339	1137 aa	Known RBP	4.05	□□□□□ -1.76
NCR1	YPL006W	RRN3	P36070	627 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	PDX3	P38075	228 aa	Known RBP	4.05	□□□□□ -1.76
NCR1	YPL006W	RPS0B	P46654	252 aa	Known RBP	4.05	□□□□□ -1.76
NCR1	YPL006W	DAN4	P47179	1161 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	NUP84	P52891	726 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	YGR016W	P53209	190 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	YET2	Q04210	160 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	FAR10	Q06001	478 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	ASA1	Q06822	443 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	KCS1	Q12494	1050 aa		4.05	□□□□□ -1.76
NCR1	YPL006W	PRP6	P19735	899 aa	Predicted RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	GID7	P25569	745 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	RME1	P32338	300 aa	Known RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	PUP2	P32379	260 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	SPR1	P32603	445 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	TGL3	P40308	642 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	PDS1	P40316	373 aa	Predicted RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	GCN20	P43535	752 aa	Known RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	RPS7B	P48164	190 aa	Known RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	PRO2	P54885	456 aa	Known RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	YSH1	Q06224	779 aa	Predicted RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	CIR2	Q08822	631 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	VPS54	Q12071	889 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	YLL056C	Q12177	298 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	IZH4	Q99393	312 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	YLR278C	Q05854	1341 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	YPK1	P12688	680 aa	Known RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	STE6	P12866	1290 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	PDC5	P16467	563 aa	Known RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	HEM12	P32347	362 aa	Predicted RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	BEM3	P32873	1128 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	YKR078W	P36158	585 aa	Known RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	PHO89	P38361	574 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	YJL206C	P39529	758 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	GPB2	P39717	880 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	INP51	P40559	946 aa	Known RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	RLP7	P40693	322 aa	Known RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	ARC1	P46672	376 aa	Known RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	PEX29	Q03370	554 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	YDR179W-A	Q03983	463 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms