RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W YGL117WP53133 265 aa3.14□□□□□ -1.91
PEP12YOR036W SPC105P53148 917 aa3.14□□□□□ -1.91
PEP12YOR036W DIP5P53388 608 aa3.14□□□□□ -1.91
PEP12YOR036W RRP6Q12149 733 aaKnown RBP3.14□□□□□ -1.91
PEP12YOR036W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
PEP12YOR036W PGI1P12709 554 aaKnown RBP3.13□□□□□ -1.91
PEP12YOR036W YEF3P16521 1044 aaKnown RBP3.13□□□□□ -1.91
PEP12YOR036W PTP2P29461 750 aa3.13□□□□□ -1.91
PEP12YOR036W YKL133CP36066 463 aa3.13□□□□□ -1.91
PEP12YOR036W AKL1P38080 1108 aaKnown RBP3.13□□□□□ -1.91
PEP12YOR036W SET2P46995 733 aaKnown RBP3.13□□□□□ -1.91
PEP12YOR036W RNR4P49723 345 aaKnown RBP3.13□□□□□ -1.91
PEP12YOR036W CNM67P53865 581 aaKnown RBP3.13□□□□□ -1.91
PEP12YOR036W GPD1Q00055 391 aaKnown RBP3.13□□□□□ -1.91
PEP12YOR036W ATG16Q03818 150 aa3.13□□□□□ -1.91
PEP12YOR036W ORM2Q06144 216 aa3.13□□□□□ -1.91
PEP12YOR036W MLC2Q06580 163 aa3.13□□□□□ -1.91
PEP12YOR036W CDC26P14724 124 aa3.12□□□□□ -1.91
PEP12YOR036W ATP12P22135 325 aa3.12□□□□□ -1.91
PEP12YOR036W DPB3P27344 201 aa3.12□□□□□ -1.91
PEP12YOR036W YKU70P32807 602 aa3.12□□□□□ -1.91
PEP12YOR036W BEM3P32873 1128 aa3.12□□□□□ -1.91
PEP12YOR036W APN2P38207 520 aa3.12□□□□□ -1.91
PEP12YOR036W YIL077CP40508 320 aa3.12□□□□□ -1.91
PEP12YOR036W IES1P43579 692 aa3.12□□□□□ -1.91
PEP12YOR036W BFA1P47113 574 aa3.12□□□□□ -1.91
PEP12YOR036W YGR021WP53212 290 aa3.12□□□□□ -1.91
PEP12YOR036W PAP2P53632 584 aaKnown RBP3.12□□□□□ -1.91
PEP12YOR036W NOP15P53927 220 aaPredicted RBP3.12□□□□□ -1.91
PEP12YOR036W NGL2Q03264 515 aaKnown RBP3.12□□□□□ -1.91
PEP12YOR036W ECM38Q05902 660 aaPredicted RBP3.12□□□□□ -1.91
PEP12YOR036W YLR407WQ06070 228 aa3.12□□□□□ -1.91
PEP12YOR036W RPS17AP02407 136 aaKnown RBP3.11□□□□□ -1.91
PEP12YOR036W RPS17BP14127 136 aaKnown RBP3.11□□□□□ -1.91
PEP12YOR036W ACO1P19414 778 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
PEP12YOR036W IMG2P25642 146 aaPredicted RBP3.11□□□□□ -1.91
PEP12YOR036W YKR075CP36155 307 aa3.11□□□□□ -1.91
PEP12YOR036W RIM4P38741 713 aa3.11□□□□□ -1.91
PEP12YOR036W YHR202WP38887 602 aa3.11□□□□□ -1.91
PEP12YOR036W VID28P40547 921 aa3.11□□□□□ -1.91
PEP12YOR036W PUS4P48567 403 aaKnown RBP3.11□□□□□ -1.91
PEP12YOR036W ATP23P53722 227 aa3.11□□□□□ -1.91
PEP12YOR036W UFO1Q04511 668 aa3.11□□□□□ -1.91
PEP12YOR036W GLN4P13188 809 aaKnown RBP3.1□□□□□ -1.91
PEP12YOR036W HOP1P20050 605 aa3.1□□□□□ -1.91
PEP12YOR036W TRX2P22803 104 aaKnown RBP3.1□□□□□ -1.91
PEP12YOR036W MF(ALPHA)2P32435 120 aa3.1□□□□□ -1.91
PEP12YOR036W HXT4P32467 576 aa3.1□□□□□ -1.91
PEP12YOR036W YPT7P32939 208 aa3.1□□□□□ -1.91
PEP12YOR036W SRP68P38687 599 aaKnown RBP3.1□□□□□ -1.91
PEP12YOR036W YHL041WP38730 149 aa3.1□□□□□ -1.91
PEP12YOR036W IRC5P43610 853 aa3.1□□□□□ -1.91
PEP12YOR036W ENP2P48234 707 aaKnown RBP3.1□□□□□ -1.91
PEP12YOR036W SCW4P53334 386 aaKnown RBP3.1□□□□□ -1.91
PEP12YOR036W HOL1P53389 586 aa3.1□□□□□ -1.91
PEP12YOR036W CPR8P53728 308 aa3.1□□□□□ -1.91
PEP12YOR036W YMR210WQ03649 449 aa3.1□□□□□ -1.91
PEP12YOR036W VPS36Q06696 566 aa3.1□□□□□ -1.91
PEP12YOR036W BRE1Q07457 700 aaKnown RBP3.1□□□□□ -1.91
PEP12YOR036W BUD21Q08492 214 aaPredicted RBP3.1□□□□□ -1.91
PEP12YOR036W PRS5Q12265 496 aaKnown RBP3.1□□□□□ -1.91
PEP12YOR036W MSS18P08593 268 aa3.09□□□□□ -1.91
PEP12YOR036W TUP1P16649 713 aa3.09□□□□□ -1.91
PEP12YOR036W IME1P21190 360 aa3.09□□□□□ -1.91
PEP12YOR036W PET127P32606 800 aa3.09□□□□□ -1.91
PEP12YOR036W PTH2P34222 208 aa3.09□□□□□ -1.91
PEP12YOR036W ELF1P36053 145 aa3.09□□□□□ -1.91
PEP12YOR036W PXL1P36166 706 aa3.09□□□□□ -1.91
PEP12YOR036W NAB3P38996 802 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
PEP12YOR036W HIS6P40545 261 aa3.09□□□□□ -1.91
PEP12YOR036W QRI7P43122 407 aa3.09□□□□□ -1.91
PEP12YOR036W TAN1P53072 289 aaPredicted RBP3.09□□□□□ -1.91
PEP12YOR036W CEG1Q01159 459 aaPredicted RBP3.09□□□□□ -1.91
PEP12YOR036W MTD1Q02046 320 aaKnown RBP3.09□□□□□ -1.91
PEP12YOR036W VPS72Q03388 795 aa3.09□□□□□ -1.91
PEP12YOR036W YPS7Q06325 596 aa3.09□□□□□ -1.91
PEP12YOR036W YFT2Q06676 274 aa3.09□□□□□ -1.91
PEP12YOR036W STP4Q07351 490 aa3.09□□□□□ -1.91
PEP12YOR036W PMA2P19657 947 aa3.08□□□□□ -1.92
PEP12YOR036W PHO3P24031 467 aa3.08□□□□□ -1.92
PEP12YOR036W COS111P38308 924 aa3.08□□□□□ -1.92
PEP12YOR036W SSP120P39931 234 aaKnown RBP3.08□□□□□ -1.92
PEP12YOR036W ACA1P39970 489 aa3.08□□□□□ -1.92
PEP12YOR036W EAF5P39995 279 aa3.08□□□□□ -1.92
PEP12YOR036W NMD5P46970 1048 aa3.08□□□□□ -1.92
PEP12YOR036W SVL3Q03088 825 aaKnown RBP3.08□□□□□ -1.92
PEP12YOR036W RSC9Q03124 581 aa3.08□□□□□ -1.92
PEP12YOR036W RCR2Q03446 210 aaKnown RBP3.08□□□□□ -1.92
PEP12YOR036W NSE5Q03718 556 aa3.08□□□□□ -1.92
PEP12YOR036W HLR1Q04429 423 aa3.08□□□□□ -1.92
PEP12YOR036W IRC3Q06683 689 aa3.08□□□□□ -1.92
PEP12YOR036W YDL121CQ07541 149 aa3.08□□□□□ -1.92
PEP12YOR036W PSR2Q07949 397 aa3.08□□□□□ -1.92
PEP12YOR036W IZH3Q07959 543 aa3.08□□□□□ -1.92
PEP12YOR036W NGL1Q08213 363 aaKnown RBP3.08□□□□□ -1.92
PEP12YOR036W NEW1Q08972 1196 aaKnown RBP3.08□□□□□ -1.92
PEP12YOR036W CWC2Q12046 339 aaPredicted RBP3.08□□□□□ -1.92
PEP12YOR036W PSF3Q12146 194 aa3.08□□□□□ -1.92
PEP12YOR036W YOL114CQ12322 202 aa3.08□□□□□ -1.92
PEP12YOR036W POM34Q12445 299 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms