RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W YGR125WP53273 1036 aa5.48□□□□□ -1.53
SPG4YMR107W SLT2Q00772 484 aa5.48□□□□□ -1.53
SPG4YMR107W SRL4Q03085 281 aa5.48□□□□□ -1.53
SPG4YMR107W DIA2Q08496 732 aaPredicted RBP5.48□□□□□ -1.53
SPG4YMR107W YOR342CQ12182 319 aa5.48□□□□□ -1.53
SPG4YMR107W GPM3Q12326 303 aa5.48□□□□□ -1.53
SPG4YMR107W RRI2Q12348 645 aa5.48□□□□□ -1.53
SPG4YMR107W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
SPG4YMR107W RRD2Q12461 358 aa5.48□□□□□ -1.53
SPG4YMR107W YBL113CQ7M4S9 792 aa5.48□□□□□ -1.53
SPG4YMR107W VCX1Q99385 411 aa5.48□□□□□ -1.53
SPG4YMR107W CMD1P06787 147 aaKnown RBP5.47□□□□□ -1.53
SPG4YMR107W CDC4P07834 779 aa5.47□□□□□ -1.53
SPG4YMR107W SNF3P10870 884 aa5.47□□□□□ -1.53
SPG4YMR107W IRE1P32361 1115 aa5.47□□□□□ -1.53
SPG4YMR107W SEC6P32844 805 aa5.47□□□□□ -1.53
SPG4YMR107W RPS0AP32905 252 aaKnown RBP5.47□□□□□ -1.53
SPG4YMR107W MAE1P36013 669 aaKnown RBP5.47□□□□□ -1.53
SPG4YMR107W CUE2P36075 443 aaKnown RBP5.47□□□□□ -1.53
SPG4YMR107W TOS1P38288 455 aa5.47□□□□□ -1.53
SPG4YMR107W EXO5P38289 585 aa5.47□□□□□ -1.53
SPG4YMR107W HIS2P38635 335 aa5.47□□□□□ -1.53
SPG4YMR107W SSZ1P38788 538 aaKnown RBP5.47□□□□□ -1.53
SPG4YMR107W NUP82P40368 713 aa5.47□□□□□ -1.53
SPG4YMR107W SBE2P42223 864 aaKnown RBP5.47□□□□□ -1.53
SPG4YMR107W SAE2P46946 345 aa5.47□□□□□ -1.53
SPG4YMR107W MAD3P47074 515 aa5.47□□□□□ -1.53
SPG4YMR107W SGM1P47166 707 aa5.47□□□□□ -1.53
SPG4YMR107W TRF5P48561 642 aaKnown RBP5.47□□□□□ -1.53
SPG4YMR107W MRM2P53123 320 aa5.47□□□□□ -1.53
SPG4YMR107W YGL108CP53139 140 aa5.47□□□□□ -1.53
SPG4YMR107W PUS2P53167 370 aa5.47□□□□□ -1.53
SPG4YMR107W CBK1P53894 756 aa5.47□□□□□ -1.53
SPG4YMR107W KTR5P53966 522 aaPredicted RBP5.47□□□□□ -1.53
SPG4YMR107W PRO2P54885 456 aaKnown RBP5.47□□□□□ -1.53
SPG4YMR107W YMR027WQ04371 470 aa5.47□□□□□ -1.53
SPG4YMR107W BRE4Q07660 1125 aa5.47□□□□□ -1.53
SPG4YMR107W GPI13Q07830 1017 aa5.47□□□□□ -1.53
SPG4YMR107W RIX7Q07844 837 aaKnown RBP5.47□□□□□ -1.53
SPG4YMR107W PEX15Q08215 383 aa5.47□□□□□ -1.53
SPG4YMR107W UIP4Q08926 304 aa5.47□□□□□ -1.53
SPG4YMR107W RUP1Q12242 671 aa5.47□□□□□ -1.53
SPG4YMR107W ILS1P09436 1072 aaKnown RBP5.46□□□□□ -1.54
SPG4YMR107W GCN3P14741 305 aa5.46□□□□□ -1.54
SPG4YMR107W POL30P15873 258 aaKnown RBP5.46□□□□□ -1.54
SPG4YMR107W MSH2P25847 964 aa5.46□□□□□ -1.54
SPG4YMR107W CDC20P26309 610 aa5.46□□□□□ -1.54
SPG4YMR107W NGR1P32831 672 aaKnown RBP5.46□□□□□ -1.54
SPG4YMR107W RPT5P33297 434 aaKnown RBP5.46□□□□□ -1.54
SPG4YMR107W UTP9P38882 575 aaKnown RBP5.46□□□□□ -1.54
SPG4YMR107W SEO1P39709 593 aa5.46□□□□□ -1.54
SPG4YMR107W BOL3P39724 118 aa5.46□□□□□ -1.54
SPG4YMR107W FCY21P40039 528 aa5.46□□□□□ -1.54
SPG4YMR107W YMR134WP40207 237 aa5.46□□□□□ -1.54
SPG4YMR107W MET18P40469 1032 aa5.46□□□□□ -1.54
SPG4YMR107W BRE2P43132 505 aa5.46□□□□□ -1.54
SPG4YMR107W PSP2P50109 593 aaKnown RBP5.46□□□□□ -1.54
SPG4YMR107W PSP1P50896 841 aaKnown RBP5.46□□□□□ -1.54
SPG4YMR107W GUP1P53154 560 aa5.46□□□□□ -1.54
SPG4YMR107W YGR266WP53326 701 aa5.46□□□□□ -1.54
SPG4YMR107W TEP1P53916 434 aa5.46□□□□□ -1.54
SPG4YMR107W YDR476CQ03362 224 aa5.46□□□□□ -1.54
SPG4YMR107W DML1Q03652 475 aa5.46□□□□□ -1.54
SPG4YMR107W TSR2Q06672 205 aaKnown RBP5.46□□□□□ -1.54
SPG4YMR107W ADY3Q07732 790 aa5.46□□□□□ -1.54
SPG4YMR107W MNL2Q12205 849 aa5.46□□□□□ -1.54
SPG4YMR107W TPK2P06245 380 aa5.45□□□□□ -1.54
SPG4YMR107W VMA2P16140 517 aaKnown RBP5.45□□□□□ -1.54
SPG4YMR107W AEP2P22136 580 aa5.45□□□□□ -1.54
SPG4YMR107W LCB1P25045 558 aaKnown RBP5.45□□□□□ -1.54
SPG4YMR107W MGM1P32266 881 aa5.45□□□□□ -1.54
SPG4YMR107W EFT1P32324 842 aaKnown RBP5.45□□□□□ -1.54
SPG4YMR107W HBS1P32769 611 aaKnown RBP5.45□□□□□ -1.54
SPG4YMR107W NTR2P36118 322 aaPredicted RBP5.45□□□□□ -1.54
SPG4YMR107W YBR139WP38109 508 aa5.45□□□□□ -1.54
SPG4YMR107W RIM2P38127 377 aa5.45□□□□□ -1.54
SPG4YMR107W MRX3P38172 270 aa5.45□□□□□ -1.54
SPG4YMR107W YBR242WP38331 238 aa5.45□□□□□ -1.54
SPG4YMR107W CHS6P40955 746 aa5.45□□□□□ -1.54
SPG4YMR107W ROG3P43602 733 aa5.45□□□□□ -1.54
SPG4YMR107W ALG2P43636 503 aa5.45□□□□□ -1.54
SPG4YMR107W MRK1P50873 501 aa5.45□□□□□ -1.54
SPG4YMR107W ORC5P50874 479 aa5.45□□□□□ -1.54
SPG4YMR107W SPC105P53148 917 aa5.45□□□□□ -1.54
SPG4YMR107W BIO4P53630 237 aa5.45□□□□□ -1.54
SPG4YMR107W YMR099CQ03161 297 aaKnown RBP5.45□□□□□ -1.54
SPG4YMR107W TFB3Q03290 321 aa5.45□□□□□ -1.54
SPG4YMR107W ATG16Q03818 150 aa5.45□□□□□ -1.54
SPG4YMR107W YET2Q04210 160 aa5.45□□□□□ -1.54
SPG4YMR107W GLO2Q05584 274 aa5.45□□□□□ -1.54
SPG4YMR107W FAR10Q06001 478 aa5.45□□□□□ -1.54
SPG4YMR107W DCS1Q06151 350 aa5.45□□□□□ -1.54
SPG4YMR107W UTP4Q06679 776 aaKnown RBP5.45□□□□□ -1.54
SPG4YMR107W THI3Q07471 609 aa5.45□□□□□ -1.54
SPG4YMR107W NTG2Q08214 380 aa5.45□□□□□ -1.54
SPG4YMR107W MCH5Q08777 521 aa5.45□□□□□ -1.54
SPG4YMR107W RSA1Q08932 381 aa5.45□□□□□ -1.54
SPG4YMR107W YLR053CQ12026 108 aa5.45□□□□□ -1.54
SPG4YMR107W NYV1Q12255 253 aa5.45□□□□□ -1.54
SPG4YMR107W DBP10Q12389 995 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms