RNA–Protein interactions for RNA: YLR261C

VPS63, Transcript of Putative protein of unknown function, yeast

Gene VPS63, Length 327 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS63	YLR261C	CDC43	P18898	376 aa		3.62	□□□□□ -1.83
VPS63	YLR261C	HOP1	P20050	605 aa		3.62	□□□□□ -1.83
VPS63	YLR261C	PET309	P32522	965 aa	Predicted RBP	3.62	□□□□□ -1.83
VPS63	YLR261C	EMP70	P32802	667 aa		3.62	□□□□□ -1.83
VPS63	YLR261C	STB5	P38699	743 aa		3.62	□□□□□ -1.83
VPS63	YLR261C	BDH2	P39713	417 aa		3.62	□□□□□ -1.83
VPS63	YLR261C	SAW1	P39735	261 aa		3.62	□□□□□ -1.83
VPS63	YLR261C	YEL025C	P39991	1188 aa		3.62	□□□□□ -1.83
VPS63	YLR261C	HIS6	P40545	261 aa		3.62	□□□□□ -1.83
VPS63	YLR261C	IMA5	P40884	581 aa		3.62	□□□□□ -1.83
VPS63	YLR261C	PIP2	P52960	996 aa		3.62	□□□□□ -1.83
VPS63	YLR261C	VPS73	P53142	486 aa	Known RBP	3.62	□□□□□ -1.83
VPS63	YLR261C	MFM1	Q02783	413 aa		3.62	□□□□□ -1.83
VPS63	YLR261C	PSF3	Q12146	194 aa		3.62	□□□□□ -1.83
VPS63	YLR261C	HOS1	Q12214	470 aa		3.62	□□□□□ -1.83
VPS63	YLR261C	YOL114C	Q12322	202 aa		3.62	□□□□□ -1.83
VPS63	YLR261C	PIF1	P07271	859 aa		3.61	□□□□□ -1.83
VPS63	YLR261C	VAS1	P07806	1104 aa	Known RBP	3.61	□□□□□ -1.83
VPS63	YLR261C	VPS33	P20795	691 aa		3.61	□□□□□ -1.83
VPS63	YLR261C	YMC2	P38087	329 aa		3.61	□□□□□ -1.83
VPS63	YLR261C	YJL193W	P39542	402 aa		3.61	□□□□□ -1.83
VPS63	YLR261C	PMT6	P42934	759 aa		3.61	□□□□□ -1.83
VPS63	YLR261C	YIP4	P53093	235 aa		3.61	□□□□□ -1.83
VPS63	YLR261C	MOT3	P54785	490 aa	Known RBP	3.61	□□□□□ -1.83
VPS63	YLR261C	HOF1	Q05080	669 aa		3.61	□□□□□ -1.83
VPS63	YLR261C	HIM1	Q06674	414 aa		3.61	□□□□□ -1.83
VPS63	YLR261C	PHO5	P00635	467 aa		3.6	□□□□□ -1.83
VPS63	YLR261C	ATP4	P05626	244 aa		3.6	□□□□□ -1.83
VPS63	YLR261C	STE12	P13574	688 aa		3.6	□□□□□ -1.83
VPS63	YLR261C	PTP2	P29461	750 aa		3.6	□□□□□ -1.83
VPS63	YLR261C	YKL133C	P36066	463 aa		3.6	□□□□□ -1.83
VPS63	YLR261C	SWD1	P39706	426 aa		3.6	□□□□□ -1.83
VPS63	YLR261C	MAD3	P47074	515 aa		3.6	□□□□□ -1.83
VPS63	YLR261C	MLC2	Q06580	163 aa		3.6	□□□□□ -1.83
VPS63	YLR261C	BMS1	Q08965	1183 aa	Known RBP	3.6	□□□□□ -1.83
VPS63	YLR261C	TAD3	Q9URQ3	322 aa		3.6	□□□□□ -1.83
VPS63	YLR261C	MSS18	P08593	268 aa		3.59	□□□□□ -1.83
VPS63	YLR261C	APA1	P16550	321 aa	Known RBP	3.59	□□□□□ -1.83
VPS63	YLR261C	DMC1	P25453	334 aa		3.59	□□□□□ -1.83
VPS63	YLR261C	DSS4	P32601	143 aa		3.59	□□□□□ -1.83
VPS63	YLR261C	SDS22	P36047	338 aa		3.59	□□□□□ -1.83
VPS63	YLR261C	RRP8	P38961	392 aa	Known RBP	3.59	□□□□□ -1.83
VPS63	YLR261C	SSP120	P39931	234 aa	Known RBP	3.59	□□□□□ -1.83
VPS63	YLR261C	GSM1	P42950	618 aa		3.59	□□□□□ -1.83
VPS63	YLR261C	QRI7	P43122	407 aa		3.59	□□□□□ -1.83
VPS63	YLR261C	STU2	P46675	888 aa		3.59	□□□□□ -1.83
VPS63	YLR261C	PUS4	P48567	403 aa	Known RBP	3.59	□□□□□ -1.83
VPS63	YLR261C	YDR179W-A	Q03983	463 aa		3.59	□□□□□ -1.83
VPS63	YLR261C	MDM20	Q12387	796 aa	Known RBP	3.59	□□□□□ -1.83
VPS63	YLR261C	ARP7	Q12406	477 aa		3.59	□□□□□ -1.83
VPS63	YLR261C	TUF1	P02992	437 aa	Known RBP	3.58	□□□□□ -1.84
VPS63	YLR261C	SEC12	P11655	471 aa		3.58	□□□□□ -1.84
VPS63	YLR261C	SEC18	P18759	758 aa	Known RBP	3.58	□□□□□ -1.84
VPS63	YLR261C	CNE1	P27825	502 aa		3.58	□□□□□ -1.84
VPS63	YLR261C	DHR2	P36009	735 aa	Predicted RBP	3.58	□□□□□ -1.84
VPS63	YLR261C	YHL041W	P38730	149 aa		3.58	□□□□□ -1.84
VPS63	YLR261C	PMC1	P38929	1173 aa	Predicted RBP	3.58	□□□□□ -1.84
VPS63	YLR261C	TPM2	P40414	161 aa		3.58	□□□□□ -1.84
VPS63	YLR261C	QRI1	P43123	477 aa	Known RBP	3.58	□□□□□ -1.84
VPS63	YLR261C	ASN1	P49089	572 aa	Known RBP	3.58	□□□□□ -1.84
VPS63	YLR261C	RTS3	P53289	263 aa		3.58	□□□□□ -1.84
VPS63	YLR261C	BUD17	P53727	317 aa		3.58	□□□□□ -1.84
VPS63	YLR261C	TEP1	P53916	434 aa		3.58	□□□□□ -1.84
VPS63	YLR261C	NGL2	Q03264	515 aa	Known RBP	3.58	□□□□□ -1.84
VPS63	YLR261C	GFA1	P14742	717 aa	Known RBP	3.57	□□□□□ -1.84
VPS63	YLR261C	CAP1	P28495	268 aa	Known RBP	3.57	□□□□□ -1.84
VPS63	YLR261C	PRE2	P30656	287 aa	Known RBP	3.57	□□□□□ -1.84
VPS63	YLR261C	THI6	P41835	540 aa		3.57	□□□□□ -1.84
VPS63	YLR261C	COS12	P53053	380 aa		3.57	□□□□□ -1.84
VPS63	YLR261C	DAK1	P54838	584 aa	Known RBP	3.57	□□□□□ -1.84
VPS63	YLR261C	RPS15	Q01855	142 aa	Known RBP	3.57	□□□□□ -1.84
VPS63	YLR261C	CEF1	Q03654	590 aa	Predicted RBP	3.57	□□□□□ -1.84
VPS63	YLR261C	ENT2	Q05785	613 aa		3.57	□□□□□ -1.84
VPS63	YLR261C	BRE1	Q07457	700 aa	Known RBP	3.57	□□□□□ -1.84
VPS63	YLR261C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
VPS63	YLR261C	YPL216W	Q08964	1102 aa		3.57	□□□□□ -1.84
VPS63	YLR261C	TPK2	P06245	380 aa		3.56	□□□□□ -1.84
VPS63	YLR261C	BET2	P20133	325 aa		3.56	□□□□□ -1.84
VPS63	YLR261C	RPS7A	P26786	190 aa	Known RBP	3.56	□□□□□ -1.84
VPS63	YLR261C	YPT10	P38146	199 aa		3.56	□□□□□ -1.84
VPS63	YLR261C	MUP3	P38734	546 aa		3.56	□□□□□ -1.84
VPS63	YLR261C	TRI1	Q05024	226 aa		3.56	□□□□□ -1.84
VPS63	YLR261C	RRP6	Q12149	733 aa	Known RBP	3.56	□□□□□ -1.84
VPS63	YLR261C	YPK1	P12688	680 aa	Known RBP	3.55	□□□□□ -1.84
VPS63	YLR261C	PGI1	P12709	554 aa	Known RBP	3.55	□□□□□ -1.84
VPS63	YLR261C	SWI4	P25302	1093 aa	Known RBP	3.55	□□□□□ -1.84
VPS63	YLR261C	YMC1	P32331	307 aa		3.55	□□□□□ -1.84
VPS63	YLR261C	CCL1	P37366	393 aa		3.55	□□□□□ -1.84
VPS63	YLR261C	APM3	P38153	483 aa		3.55	□□□□□ -1.84
VPS63	YLR261C	RIM4	P38741	713 aa		3.55	□□□□□ -1.84
VPS63	YLR261C	SPC72	P39723	622 aa		3.55	□□□□□ -1.84
VPS63	YLR261C	YEL020C	P39994	560 aa		3.55	□□□□□ -1.84
VPS63	YLR261C	VFA1	P40080	203 aa		3.55	□□□□□ -1.84
VPS63	YLR261C	TAN1	P53072	289 aa	Predicted RBP	3.55	□□□□□ -1.84
VPS63	YLR261C	YGL117W	P53133	265 aa		3.55	□□□□□ -1.84
VPS63	YLR261C	TRS31	Q03337	283 aa		3.55	□□□□□ -1.84
VPS63	YLR261C	USA1	Q03714	838 aa		3.55	□□□□□ -1.84
VPS63	YLR261C	AAD4	Q07747	329 aa		3.55	□□□□□ -1.84
VPS63	YLR261C	ICL2	Q12031	575 aa		3.55	□□□□□ -1.84
VPS63	YLR261C	BNR1	P40450	1375 aa		3.54	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms