RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFA1	YKL028W	GRX3	Q03835	250 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	YLR407W	Q06070	228 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	HAL9	Q12180	1030 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	DBP10	Q12389	995 aa	Known RBP	4.75	□□□□□ -1.65
TFA1	YKL028W	RPS9A	O13516	197 aa	Known RBP	4.74	□□□□□ -1.65
TFA1	YKL028W	PRC1	P00729	532 aa		4.74	□□□□□ -1.65
TFA1	YKL028W	VMA2	P16140	517 aa	Known RBP	4.74	□□□□□ -1.65
TFA1	YKL028W	SNF5	P18480	905 aa		4.74	□□□□□ -1.65
TFA1	YKL028W	CTS1	P29029	562 aa		4.74	□□□□□ -1.65
TFA1	YKL028W	SET3	P36124	751 aa		4.74	□□□□□ -1.65
TFA1	YKL028W	YJL045W	P47052	634 aa		4.74	□□□□□ -1.65
TFA1	YKL028W	PSP1	P50896	841 aa	Known RBP	4.74	□□□□□ -1.65
TFA1	YKL028W	TNA1	P53322	534 aa		4.74	□□□□□ -1.65
TFA1	YKL028W	BSC5	P53755	489 aa		4.74	□□□□□ -1.65
TFA1	YKL028W	CIK1	Q01649	594 aa		4.74	□□□□□ -1.65
TFA1	YKL028W	HRK1	Q08732	759 aa	Known RBP	4.74	□□□□□ -1.65
TFA1	YKL028W	DIN7	Q12086	430 aa		4.74	□□□□□ -1.65
TFA1	YKL028W	ISA2	Q12425	185 aa		4.74	□□□□□ -1.65
TFA1	YKL028W	ZRT2	Q12436	422 aa		4.74	□□□□□ -1.65
TFA1	YKL028W	RTN2	Q12443	393 aa		4.74	□□□□□ -1.65
TFA1	YKL028W	CNS1	P33313	385 aa		4.73	□□□□□ -1.65
TFA1	YKL028W	OCA1	P50946	238 aa	Predicted RBP	4.73	□□□□□ -1.65
TFA1	YKL028W	NNF2	P53253	936 aa		4.73	□□□□□ -1.65
TFA1	YKL028W	RPT6	Q01939	405 aa	Known RBP	4.73	□□□□□ -1.65
TFA1	YKL028W	RMT2	Q03305	412 aa		4.73	□□□□□ -1.65
TFA1	YKL028W	TRI1	Q05024	226 aa		4.73	□□□□□ -1.65
TFA1	YKL028W	YLR345W	Q06137	509 aa		4.73	□□□□□ -1.65
TFA1	YKL028W	STF1	P01098	86 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	NOT3	P06102	836 aa	Known RBP	4.72	□□□□□ -1.65
TFA1	YKL028W	RPL19A	P0CX82	189 aa	Known RBP	4.72	□□□□□ -1.65
TFA1	YKL028W	RPL19B	P0CX83	189 aa	Predicted RBP	4.72	□□□□□ -1.65
TFA1	YKL028W	SWI4	P25302	1093 aa	Known RBP	4.72	□□□□□ -1.65
TFA1	YKL028W	YSC84	P32793	468 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	MDL1	P33310	695 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	AKL1	P38080	1108 aa	Known RBP	4.72	□□□□□ -1.65
TFA1	YKL028W	POA1	P38218	177 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	YHR218W	P38899	603 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	LTP1	P40347	161 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	RRT14	P40470	206 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	CEP3	P40969	608 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	SIP4	P46954	829 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	FOL2	P51601	243 aa	Known RBP	4.72	□□□□□ -1.65
TFA1	YKL028W	IMA1	P53051	589 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	MNT2	P53059	558 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	DUO1	P53168	247 aa	Known RBP	4.72	□□□□□ -1.65
TFA1	YKL028W	VPS75	P53853	264 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	YMR210W	Q03649	449 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	PRP42	Q03776	544 aa	Known RBP	4.72	□□□□□ -1.65
TFA1	YKL028W	RSB1	Q08417	382 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	YOR022C	Q12204	715 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	SKM1	Q12469	655 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	GLK1	P17709	500 aa	Known RBP	4.72	□□□□□ -1.65
TFA1	YKL028W	TRX1	P22217	103 aa	Known RBP	4.72	□□□□□ -1.65
TFA1	YKL028W	MNE1	P24720	663 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	RPN2	P32565	945 aa	Known RBP	4.72	□□□□□ -1.65
TFA1	YKL028W	FRD1	P32614	470 aa	Known RBP	4.72	□□□□□ -1.65
TFA1	YKL028W	CTF13	P35203	478 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	YEL025C	P39991	1188 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	YJR061W	P40355	935 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	SPO22	P40511	975 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	DJP1	P40564	432 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	YNR071C	P53757	342 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	YKR011C	Q02209	353 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	YML119W	Q03208	357 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	AAD4	Q07747	329 aa		4.72	□□□□□ -1.65
TFA1	YKL028W	CUE5	Q08412	411 aa	Known RBP	4.72	□□□□□ -1.65
TFA1	YKL028W	PAR32	Q12515	295 aa	Known RBP	4.72	□□□□□ -1.65
TFA1	YKL028W	INO80	P53115	1489 aa		4.71	□□□□□ -1.66
TFA1	YKL028W	CPA2	P03965	1118 aa	Known RBP	4.71	□□□□□ -1.66
TFA1	YKL028W	ADE3	P07245	946 aa	Known RBP	4.71	□□□□□ -1.66
TFA1	YKL028W	SEC53	P07283	254 aa	Known RBP	4.71	□□□□□ -1.66
TFA1	YKL028W	RIT1	P23796	513 aa		4.71	□□□□□ -1.66
TFA1	YKL028W	PRP22	P24384	1145 aa	Known RBP	4.71	□□□□□ -1.66
TFA1	YKL028W	LCB1	P25045	558 aa	Known RBP	4.71	□□□□□ -1.66
TFA1	YKL028W	SEC21	P32074	935 aa	Known RBP	4.71	□□□□□ -1.66
TFA1	YKL028W	PUP2	P32379	260 aa		4.71	□□□□□ -1.66
TFA1	YKL028W	AIM26	P32858	118 aa		4.71	□□□□□ -1.66
TFA1	YKL028W	SEC28	P40509	296 aa	Known RBP	4.71	□□□□□ -1.66
TFA1	YKL028W	ARC1	P46672	376 aa	Known RBP	4.71	□□□□□ -1.66
TFA1	YKL028W	POL31	P46957	487 aa		4.71	□□□□□ -1.66
TFA1	YKL028W	YNR061C	P53747	219 aa		4.71	□□□□□ -1.66
TFA1	YKL028W	LEE1	Q02799	301 aa	Known RBP	4.71	□□□□□ -1.66
TFA1	YKL028W	PEX25	Q02969	394 aa		4.71	□□□□□ -1.66
TFA1	YKL028W	YPS7	Q06325	596 aa		4.71	□□□□□ -1.66
TFA1	YKL028W	HUA2	Q12134	243 aa		4.71	□□□□□ -1.66
TFA1	YKL028W	OSW2	Q12202	724 aa		4.71	□□□□□ -1.66
TFA1	YKL028W	STE50	P25344	346 aa		4.7	□□□□□ -1.66
TFA1	YKL028W	IMG2	P25642	146 aa	Predicted RBP	4.7	□□□□□ -1.66
TFA1	YKL028W	ADK2	P26364	225 aa		4.7	□□□□□ -1.66
TFA1	YKL028W	GPI10	P30777	616 aa		4.7	□□□□□ -1.66
TFA1	YKL028W	TYE7	P33122	291 aa	Predicted RBP	4.7	□□□□□ -1.66
TFA1	YKL028W	MIP6	P38760	659 aa	Known RBP	4.7	□□□□□ -1.66
TFA1	YKL028W	FSH1	P38777	243 aa	Known RBP	4.7	□□□□□ -1.66
TFA1	YKL028W	GDI1	P39958	451 aa	Known RBP	4.7	□□□□□ -1.66
TFA1	YKL028W	MRX6	P48564	524 aa		4.7	□□□□□ -1.66
TFA1	YKL028W	PSP2	P50109	593 aa	Known RBP	4.7	□□□□□ -1.66
TFA1	YKL028W	EXG2	P52911	562 aa		4.7	□□□□□ -1.66
TFA1	YKL028W	PUS2	P53167	370 aa		4.7	□□□□□ -1.66
TFA1	YKL028W	PIL1	P53252	339 aa	Known RBP	4.7	□□□□□ -1.66
TFA1	YKL028W	NCS2	P53923	493 aa	Predicted RBP	4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms