RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	PHO92	Q06390	306 aa		4.65	□□□□□ -1.67
AVT1	YJR001W	ISA2	Q12425	185 aa		4.65	□□□□□ -1.67
AVT1	YJR001W	KCS1	Q12494	1050 aa		4.65	□□□□□ -1.67
AVT1	YJR001W	LEU2	P04173	364 aa	Predicted RBP	4.64	□□□□□ -1.67
AVT1	YJR001W	GCD1	P09032	578 aa	Predicted RBP	4.64	□□□□□ -1.67
AVT1	YJR001W	NCP1	P16603	691 aa	Known RBP	4.64	□□□□□ -1.67
AVT1	YJR001W	ROX1	P25042	368 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	STE50	P25344	346 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	OCA4	P25366	362 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	YCL049C	P25577	312 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	NGG1	P32494	702 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	YEL043W	P32618	956 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	RSM22	P36056	628 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	YAP3	P38749	330 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	GDI1	P39958	451 aa	Known RBP	4.64	□□□□□ -1.67
AVT1	YJR001W	YER010C	P40011	234 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	YIL161W	P40449	235 aa	Known RBP	4.64	□□□□□ -1.67
AVT1	YJR001W	NAS2	P40555	220 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	SET4	P42948	560 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
AVT1	YJR001W	YJR098C	P47139	656 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	PSP2	P50109	593 aa	Known RBP	4.64	□□□□□ -1.67
AVT1	YJR001W	CIK1	Q01649	594 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	GUP2	Q08929	609 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	FRE6	Q12473	712 aa		4.64	□□□□□ -1.67
AVT1	YJR001W	YRF1-4	O13559	1382 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	FUM1	P08417	488 aa	Known RBP	4.63	□□□□□ -1.67
AVT1	YJR001W	HVG1	P0CE11	249 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	DAT1	P13483	248 aa	Known RBP	4.63	□□□□□ -1.67
AVT1	YJR001W	SGF29	P25554	259 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	NAM7	P30771	971 aa	Known RBP	4.63	□□□□□ -1.67
AVT1	YJR001W	GPI10	P30777	616 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	GCD11	P32481	527 aa	Known RBP	4.63	□□□□□ -1.67
AVT1	YJR001W	YKR018C	P36114	725 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	OLA1	P38219	394 aa	Known RBP	4.63	□□□□□ -1.67
AVT1	YJR001W	DED81	P38707	554 aa	Known RBP	4.63	□□□□□ -1.67
AVT1	YJR001W	AIM10	P39965	576 aa	Known RBP	4.63	□□□□□ -1.67
AVT1	YJR001W	YIR014W	P40570	242 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	PHB1	P40961	287 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	SNX4	P47057	423 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	RRT6	P53117	311 aa	Predicted RBP	4.63	□□□□□ -1.67
AVT1	YJR001W	MDR1	P53258	950 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	CPR6	P53691	371 aa	Known RBP	4.63	□□□□□ -1.67
AVT1	YJR001W	YML133C	Q03099	1374 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	YDR306C	Q06640	478 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	YLR419W	Q06698	1435 aa	Known RBP	4.63	□□□□□ -1.67
AVT1	YJR001W	YLL067C	Q07888	1374 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	LOT6	Q07923	191 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	HFI1	Q12060	488 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	SKS1	Q12505	502 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	DNF3	Q12674	1656 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	APM4	Q99186	491 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	YLL066C	Q99208	1374 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	Q0182	Q9ZZW1	134 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	HAP1	P0CE41	1502 aa		4.63	□□□□□ -1.67
AVT1	YJR001W	ATP12	P22135	325 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	LCB1	P25045	558 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	SYP1	P25623	870 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	TPS2	P31688	896 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	PYC2	P32327	1180 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
AVT1	YJR001W	LAS1	P36146	502 aa	Predicted RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	PTC4	P38089	393 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	APM3	P38153	483 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	GND1	P38720	489 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	SAP1	P39955	897 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	ARF3	P40994	183 aa	RIP-Chip data	4.62	□□□□□ -1.67	RIP-Chip
AVT1	YJR001W	ZIM17	P42844	174 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	CCT7	P42943	550 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	GYP8	P43570	497 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	PUS4	P48567	403 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	YGR283C	P53336	341 aa	Predicted RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	YNL165W	P53891	406 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	YPL107W	Q02873	248 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	FCP1	Q03254	732 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	RMT2	Q03305	412 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	EMG1	Q06287	252 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	TSR1	Q07381	788 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	YIG1	Q08956	461 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	HAL9	Q12180	1030 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	PDH1	Q12428	516 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	LSO2	Q3E772	92 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	ARG3	P05150	338 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	NUC1	P08466	329 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	MIS1	P09440	975 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	UBC1	P21734	215 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	PRP28	P23394	588 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	SPB1	P25582	841 aa	Predicted RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	CCR4	P31384	837 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	AAR2	P32357	355 aa	Predicted RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	NIP1	P32497	812 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	SMI1	P32566	505 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	RRP1	P35178	278 aa	Predicted RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	LHS1	P36016	881 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	YRO2	P38079	344 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	BSD2	P38356	321 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	TDA3	P38758	523 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	PPE1	P38796	400 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	BUD16	P39988	312 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	PUG1	P40100	303 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms