RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W URA8P38627 578 aaPredicted RBP10.58□□□□□ -0.71
UBA4YHR111W PRM9P39551 298 aa10.58□□□□□ -0.71
UBA4YHR111W BST1P43571 1029 aa10.58□□□□□ -0.71
UBA4YHR111W PRP24P49960 444 aaKnown RBP10.58□□□□□ -0.71
UBA4YHR111W SCY1P53009 804 aa10.58□□□□□ -0.71
UBA4YHR111W NMA2P53204 395 aa10.58□□□□□ -0.71
UBA4YHR111W YNL108CP53929 270 aa10.58□□□□□ -0.71
UBA4YHR111W INA17Q02888 182 aa10.58□□□□□ -0.71
UBA4YHR111W SND1Q04007 877 aa10.58□□□□□ -0.71
UBA4YHR111W THI21Q08975 551 aa10.58□□□□□ -0.71
UBA4YHR111W DAS2Q12084 232 aa10.58□□□□□ -0.71
UBA4YHR111W GFA1P14742 717 aaKnown RBP10.58□□□□□ -0.72
UBA4YHR111W MET16P18408 261 aaPredicted RBP10.58□□□□□ -0.72
UBA4YHR111W DBF4P32325 704 aa10.58□□□□□ -0.72
UBA4YHR111W SPC110P32380 944 aa10.58□□□□□ -0.72
UBA4YHR111W SPT23P35210 1082 aa10.58□□□□□ -0.72
UBA4YHR111W LAM1P38851 1228 aa10.58□□□□□ -0.72
UBA4YHR111W MRX6P48564 524 aa10.58□□□□□ -0.72
UBA4YHR111W CDC55Q00362 526 aa10.58□□□□□ -0.72
UBA4YHR111W BET4Q00618 327 aa10.58□□□□□ -0.72
UBA4YHR111W YMR206WQ03695 313 aa10.58□□□□□ -0.72
UBA4YHR111W ATG16Q03818 150 aa10.58□□□□□ -0.72
UBA4YHR111W ARA2Q04212 335 aa10.58□□□□□ -0.72
UBA4YHR111W FMP27Q06179 2628 aa10.57□□□□□ -0.72
UBA4YHR111W ERG11P10614 530 aa10.57□□□□□ -0.72
UBA4YHR111W RAD57P25301 460 aa10.57□□□□□ -0.72
UBA4YHR111W MSH2P25847 964 aa10.57□□□□□ -0.72
UBA4YHR111W RIM101P33400 625 aa10.57□□□□□ -0.72
UBA4YHR111W PCH2P38126 564 aa10.57□□□□□ -0.72
UBA4YHR111W HIS2P38635 335 aa10.57□□□□□ -0.72
UBA4YHR111W FSH1P38777 243 aaKnown RBP10.57□□□□□ -0.72
UBA4YHR111W CNN1P43618 361 aa10.57□□□□□ -0.72
UBA4YHR111W RPN4Q03465 531 aa10.57□□□□□ -0.72
UBA4YHR111W SOV1Q04748 898 aa10.57□□□□□ -0.72
UBA4YHR111W IVY1Q04934 453 aa10.57□□□□□ -0.72
UBA4YHR111W YDL073WQ07454 984 aa10.57□□□□□ -0.72
UBA4YHR111W NDD1Q08887 554 aa10.57□□□□□ -0.72
UBA4YHR111W ARF2P19146 181 aaKnown RBP10.56□□□□□ -0.72
UBA4YHR111W DUN1P39009 513 aa10.56□□□□□ -0.72
UBA4YHR111W ERP2P39704 215 aa10.56□□□□□ -0.72
UBA4YHR111W SPC72P39723 622 aa10.56□□□□□ -0.72
UBA4YHR111W EDC3P39998 551 aaKnown RBP10.56□□□□□ -0.72
UBA4YHR111W KHA1P40309 873 aa10.56□□□□□ -0.72
UBA4YHR111W YIR007WP40566 764 aa10.56□□□□□ -0.72
UBA4YHR111W VEL1P53058 206 aa10.56□□□□□ -0.72
UBA4YHR111W TAN1P53072 289 aaPredicted RBP10.56□□□□□ -0.72
UBA4YHR111W YNL040WP53960 456 aaPredicted RBP10.56□□□□□ -0.72
UBA4YHR111W YCS4Q06156 1176 aa10.56□□□□□ -0.72
UBA4YHR111W YLR001CQ07895 862 aa10.56□□□□□ -0.72
UBA4YHR111W HIS1P00498 297 aaKnown RBP10.55□□□□□ -0.72
UBA4YHR111W HXT1P32465 570 aa10.55□□□□□ -0.72
UBA4YHR111W EBP2P36049 427 aaKnown RBP10.55□□□□□ -0.72
UBA4YHR111W RRT2P38332 387 aa10.55□□□□□ -0.72
UBA4YHR111W PMC1P38929 1173 aaPredicted RBP10.55□□□□□ -0.72
UBA4YHR111W OSW5P40219 148 aa10.55□□□□□ -0.72
UBA4YHR111W OSW7P43611 510 aa10.55□□□□□ -0.72
UBA4YHR111W CWC24P53769 259 aa10.55□□□□□ -0.72
UBA4YHR111W YNL247WP53852 767 aaKnown RBP10.55□□□□□ -0.72
UBA4YHR111W ALF1P53904 254 aa10.55□□□□□ -0.72
UBA4YHR111W NIS1P53939 407 aa10.55□□□□□ -0.72
UBA4YHR111W CTR9P89105 1077 aa10.55□□□□□ -0.72
UBA4YHR111W PUF3Q07807 879 aaKnown RBP RIP-Chip data10.55□□□□□ -0.72not detected
UBA4YHR111W YLR012CQ07927 99 aa10.55□□□□□ -0.72
UBA4YHR111W MSF1P08425 469 aa10.54□□□□□ -0.72
UBA4YHR111W PDR1P12383 1068 aa10.54□□□□□ -0.72
UBA4YHR111W SEC23P15303 768 aaKnown RBP10.54□□□□□ -0.72
UBA4YHR111W TCD1P38756 429 aa10.54□□□□□ -0.72
UBA4YHR111W EXO1P39875 702 aa10.54□□□□□ -0.72
UBA4YHR111W SNG1P46950 547 aa10.54□□□□□ -0.72
UBA4YHR111W BRO1P48582 844 aa10.54□□□□□ -0.72
UBA4YHR111W NOG2P53742 486 aaKnown RBP10.54□□□□□ -0.72
UBA4YHR111W CAF120P53836 1060 aa10.54□□□□□ -0.72
UBA4YHR111W YML053CQ04978 212 aa10.54□□□□□ -0.72
UBA4YHR111W YDR278CQ05612 105 aa10.54□□□□□ -0.72
UBA4YHR111W YSH1Q06224 779 aaPredicted RBP10.54□□□□□ -0.72
UBA4YHR111W HSF1P10961 833 aa10.53□□□□□ -0.72
UBA4YHR111W ADY2P25613 283 aa10.53□□□□□ -0.72
UBA4YHR111W CSE1P33307 960 aa10.53□□□□□ -0.72
UBA4YHR111W VAC8P39968 578 aa10.53□□□□□ -0.72
UBA4YHR111W KTR7P40504 517 aa10.53□□□□□ -0.72
UBA4YHR111W EFM4P40516 257 aa10.53□□□□□ -0.72
UBA4YHR111W EMW1P42842 904 aaKnown RBP10.53□□□□□ -0.72
UBA4YHR111W PYK2P52489 506 aaKnown RBP10.53□□□□□ -0.72
UBA4YHR111W KAP114P53067 1004 aa10.53□□□□□ -0.72
UBA4YHR111W FLC3P53121 802 aa10.53□□□□□ -0.72
UBA4YHR111W UFO1Q04511 668 aa10.53□□□□□ -0.72
UBA4YHR111W KAP95Q06142 861 aaKnown RBP10.53□□□□□ -0.72
UBA4YHR111W SPO21Q12411 609 aa10.53□□□□□ -0.72
UBA4YHR111W IZH4Q99393 312 aa10.53□□□□□ -0.72
UBA4YHR111W MSB2P32334 1306 aa10.52□□□□□ -0.73
UBA4YHR111W STE13P33894 931 aa10.52□□□□□ -0.73
UBA4YHR111W KAP104P38217 918 aaKnown RBP10.52□□□□□ -0.73
UBA4YHR111W DOS2P54858 310 aa10.52□□□□□ -0.73
UBA4YHR111W DIG1Q03063 452 aaKnown RBP10.52□□□□□ -0.73
UBA4YHR111W ADI1Q03677 179 aa10.52□□□□□ -0.73
UBA4YHR111W MFB1Q04922 465 aa10.52□□□□□ -0.73
UBA4YHR111W GRX8Q05926 109 aa10.52□□□□□ -0.73
UBA4YHR111W PEX15Q08215 383 aa10.52□□□□□ -0.73
UBA4YHR111W CAN1P04817 590 aa10.51□□□□□ -0.73
UBA4YHR111W MEI4P29467 408 aa10.51□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms