RNA–Protein interactions for RNA: YHR038W

RRF1, Transcript of Mitochondrial ribosome recycling factor, yeastyeast

Gene RRF1, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRF1YHR038W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
RRF1YHR038W SFL1P20134 766 aa3.3□□□□□ -1.88
RRF1YHR038W PET127P32606 800 aa3.3□□□□□ -1.88
RRF1YHR038W NUG1P40010 520 aaKnown RBP3.3□□□□□ -1.88
RRF1YHR038W YJR039WP47107 1121 aa3.3□□□□□ -1.88
RRF1YHR038W EFR3Q03653 782 aaKnown RBP3.3□□□□□ -1.88
RRF1YHR038W FPR4Q06205 392 aaPredicted RBP3.3□□□□□ -1.88
RRF1YHR038W GUD1Q07729 489 aa3.3□□□□□ -1.88
RRF1YHR038W HMG1P12683 1054 aa3.29□□□□□ -1.88
RRF1YHR038W PCL2P25693 308 aa3.29□□□□□ -1.88
RRF1YHR038W PCM1P38628 557 aaKnown RBP3.29□□□□□ -1.88
RRF1YHR038W SAE2P46946 345 aa3.29□□□□□ -1.88
RRF1YHR038W YMR210WQ03649 449 aa3.29□□□□□ -1.88
RRF1YHR038W YPL216WQ08964 1102 aa3.29□□□□□ -1.88
RRF1YHR038W RNR3P21672 869 aaKnown RBP3.28□□□□□ -1.88
RRF1YHR038W IMG2P25642 146 aaPredicted RBP3.28□□□□□ -1.88
RRF1YHR038W TDA3P38758 523 aa3.28□□□□□ -1.88
RRF1YHR038W YPL071CQ02864 156 aa3.28□□□□□ -1.88
RRF1YHR038W PPN1Q04119 674 aa3.28□□□□□ -1.88
RRF1YHR038W SPN1Q06505 410 aaPredicted RBP3.28□□□□□ -1.88
RRF1YHR038W NTG2Q08214 380 aa3.28□□□□□ -1.88
RRF1YHR038W DCS2Q12123 353 aa3.28□□□□□ -1.88
RRF1YHR038W AIM17P23180 465 aaKnown RBP3.27□□□□□ -1.89
RRF1YHR038W YCR043CP25361 127 aa3.27□□□□□ -1.89
RRF1YHR038W GND1P38720 489 aaKnown RBP3.27□□□□□ -1.89
RRF1YHR038W YIR016WP40572 265 aa3.27□□□□□ -1.89
RRF1YHR038W MDV1P47025 714 aa3.27□□□□□ -1.89
RRF1YHR038W SDA1P53313 767 aaKnown RBP3.27□□□□□ -1.89
RRF1YHR038W TIM50Q02776 476 aa3.27□□□□□ -1.89
RRF1YHR038W PPG1P32838 368 aa3.26□□□□□ -1.89
RRF1YHR038W TDA10P42938 290 aa3.26□□□□□ -1.89
RRF1YHR038W IRC7P43623 340 aa3.26□□□□□ -1.89
RRF1YHR038W RPS15Q01855 142 aaKnown RBP3.26□□□□□ -1.89
RRF1YHR038W TFB2Q02939 513 aa3.26□□□□□ -1.89
RRF1YHR038W ARC40P38328 384 aaKnown RBP3.25□□□□□ -1.89
RRF1YHR038W YIL152WP40455 235 aa3.25□□□□□ -1.89
RRF1YHR038W PXA1P41909 870 aa3.25□□□□□ -1.89
RRF1YHR038W YGR054WP53235 642 aaKnown RBP3.25□□□□□ -1.89
RRF1YHR038W GRS2Q06817 618 aa3.25□□□□□ -1.89
RRF1YHR038W YTA7P40340 1379 aa3.25□□□□□ -1.89
RRF1YHR038W MTG2P38860 518 aa3.24□□□□□ -1.89
RRF1YHR038W BEM4P39011 633 aa3.24□□□□□ -1.89
RRF1YHR038W SPO1P53541 631 aa3.24□□□□□ -1.89
RRF1YHR038W YNL193WP53870 558 aa3.24□□□□□ -1.89
RRF1YHR038W BOP3P53958 396 aa3.24□□□□□ -1.89
RRF1YHR038W WAR1Q03631 944 aa3.24□□□□□ -1.89
RRF1YHR038W CEF1Q03654 590 aaPredicted RBP3.24□□□□□ -1.89
RRF1YHR038W GFD1Q04839 188 aaKnown RBP3.24□□□□□ -1.89
RRF1YHR038W IME1P21190 360 aa3.23□□□□□ -1.89
RRF1YHR038W YBR139WP38109 508 aa3.23□□□□□ -1.89
RRF1YHR038W BUD8P41698 603 aa3.23□□□□□ -1.89
RRF1YHR038W TES1P41903 349 aaKnown RBP3.23□□□□□ -1.89
RRF1YHR038W RET2P43621 546 aa3.23□□□□□ -1.89
RRF1YHR038W SAP4P53036 818 aa3.23□□□□□ -1.89
RRF1YHR038W UTP14Q04500 899 aaKnown RBP3.23□□□□□ -1.89
RRF1YHR038W YLR407WQ06070 228 aa3.23□□□□□ -1.89
RRF1YHR038W PCL8Q08966 492 aa3.23□□□□□ -1.89
RRF1YHR038W ACO1P19414 778 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
RRF1YHR038W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
RRF1YHR038W YKU70P32807 602 aa3.22□□□□□ -1.89
RRF1YHR038W HLJ1P48353 224 aa3.22□□□□□ -1.89
RRF1YHR038W MET13P53128 600 aa3.22□□□□□ -1.89
RRF1YHR038W FDC1Q03034 503 aa3.22□□□□□ -1.89
RRF1YHR038W RTT103Q05543 409 aa3.22□□□□□ -1.89
RRF1YHR038W YMR230W-AQ3E7B5 62 aa3.22□□□□□ -1.89
RRF1YHR038W COQ3P27680 312 aa3.21□□□□□ -1.9
RRF1YHR038W RRP14P36080 434 aaKnown RBP3.21□□□□□ -1.9
RRF1YHR038W FMP46P36141 133 aaKnown RBP3.21□□□□□ -1.9
RRF1YHR038W YPT10P38146 199 aa3.21□□□□□ -1.9
RRF1YHR038W YIL092WP40497 633 aa3.21□□□□□ -1.9
RRF1YHR038W YGR153WP48238 217 aa3.21□□□□□ -1.9
RRF1YHR038W HRD3Q05787 833 aa3.21□□□□□ -1.9
RRF1YHR038W YPS7Q06325 596 aa3.21□□□□□ -1.9
RRF1YHR038W NOP14Q99207 810 aaKnown RBP3.21□□□□□ -1.9
RRF1YHR038W RPT3P33298 428 aaKnown RBP3.2□□□□□ -1.9
RRF1YHR038W LOT5P34234 306 aa3.2□□□□□ -1.9
RRF1YHR038W DHR2P36009 735 aaPredicted RBP3.2□□□□□ -1.9
RRF1YHR038W SLX1P38324 304 aa3.2□□□□□ -1.9
RRF1YHR038W CRG1P38892 291 aaRIP-Chip data3.2□□□□□ -1.9not detected
RRF1YHR038W CKB2P38930 258 aa3.2□□□□□ -1.9
RRF1YHR038W YEL025CP39991 1188 aa3.2□□□□□ -1.9
RRF1YHR038W MGS1P40151 587 aa3.2□□□□□ -1.9
RRF1YHR038W YLR001CQ07895 862 aa3.2□□□□□ -1.9
RRF1YHR038W TGS1Q12052 315 aa3.2□□□□□ -1.9
RRF1YHR038W RPS17AP02407 136 aaKnown RBP3.19□□□□□ -1.9
RRF1YHR038W RPS17BP14127 136 aaKnown RBP3.19□□□□□ -1.9
RRF1YHR038W YJU2P28320 278 aaPredicted RBP3.19□□□□□ -1.9
RRF1YHR038W PRP19P32523 503 aaKnown RBP3.19□□□□□ -1.9
RRF1YHR038W BRN1P38170 754 aa3.19□□□□□ -1.9
RRF1YHR038W RTT107P38850 1070 aa3.19□□□□□ -1.9
RRF1YHR038W YMR317WQ04893 1140 aa3.19□□□□□ -1.9
RRF1YHR038W DSE3Q08729 430 aa3.19□□□□□ -1.9
RRF1YHR038W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
RRF1YHR038W AIM41Q12032 185 aa3.19□□□□□ -1.9
RRF1YHR038W UBX3Q12229 455 aa3.19□□□□□ -1.9
RRF1YHR038W FTR1P40088 404 aa3.18□□□□□ -1.9
RRF1YHR038W TAF4P50105 388 aa3.18□□□□□ -1.9
RRF1YHR038W ALG12P53730 551 aa3.18□□□□□ -1.9
RRF1YHR038W NOP15P53927 220 aaPredicted RBP3.18□□□□□ -1.9
RRF1YHR038W PTA1Q01329 785 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms