RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W SNF5P18480 905 aa9.36□□□□□ -0.91
CPD1YGR247W DAL81P21657 970 aa9.36□□□□□ -0.91
CPD1YGR247W ERG6P25087 383 aaKnown RBP9.36□□□□□ -0.91
CPD1YGR247W SFP1P32432 683 aa9.36□□□□□ -0.91
CPD1YGR247W GYP6P32806 458 aa9.36□□□□□ -0.91
CPD1YGR247W NPR3P38742 1146 aa9.36□□□□□ -0.91
CPD1YGR247W VAC8P39968 578 aa9.36□□□□□ -0.91
CPD1YGR247W TAN1P53072 289 aaPredicted RBP9.36□□□□□ -0.91
CPD1YGR247W KTR6P54070 446 aa9.36□□□□□ -0.91
CPD1YGR247W PEX15Q08215 383 aa9.36□□□□□ -0.91
CPD1YGR247W VMA4P22203 233 aaKnown RBP9.35□□□□□ -0.91
CPD1YGR247W SLX5P32828 619 aaKnown RBP9.35□□□□□ -0.91
CPD1YGR247W UME6P39001 836 aa9.35□□□□□ -0.91
CPD1YGR247W SUM1P46676 1062 aa9.35□□□□□ -0.91
CPD1YGR247W NAM8Q00539 523 aaKnown RBP9.35□□□□□ -0.91
CPD1YGR247W AIM39Q08223 395 aa9.35□□□□□ -0.91
CPD1YGR247W RPN8Q08723 338 aaKnown RBP9.35□□□□□ -0.91
CPD1YGR247W YLR046CQ12253 270 aa9.35□□□□□ -0.91
CPD1YGR247W PUT4P15380 627 aa9.34□□□□□ -0.91
CPD1YGR247W NIP100P33420 868 aa9.34□□□□□ -0.91
CPD1YGR247W TRZ1P36159 838 aaPredicted RBP9.34□□□□□ -0.91
CPD1YGR247W LAM1P38851 1228 aa9.34□□□□□ -0.91
CPD1YGR247W ERV46P39727 415 aa9.34□□□□□ -0.91
CPD1YGR247W SAP185P40856 1058 aa9.34□□□□□ -0.91
CPD1YGR247W YGL140CP53120 1219 aa9.34□□□□□ -0.91
CPD1YGR247W PEX31P53203 462 aa9.34□□□□□ -0.91
CPD1YGR247W VPS5Q92331 675 aa9.34□□□□□ -0.91
CPD1YGR247W ENO1P00924 437 aaKnown RBP9.33□□□□□ -0.92
CPD1YGR247W GEX1P25596 615 aa9.33□□□□□ -0.92
CPD1YGR247W GSY2P27472 705 aa9.33□□□□□ -0.92
CPD1YGR247W YET1P35723 206 aa9.33□□□□□ -0.92
CPD1YGR247W GEX2P36173 615 aa9.33□□□□□ -0.92
CPD1YGR247W YBR238CP38330 731 aaKnown RBP9.33□□□□□ -0.92
CPD1YGR247W LYS9P38999 446 aa9.33□□□□□ -0.92
CPD1YGR247W PRM9P39551 298 aa9.33□□□□□ -0.92
CPD1YGR247W DSN1P40568 576 aa9.33□□□□□ -0.92
CPD1YGR247W SNZ3P43545 298 aa9.33□□□□□ -0.92
CPD1YGR247W SNZ2P53824 298 aa9.33□□□□□ -0.92
CPD1YGR247W DOS2P54858 310 aa9.33□□□□□ -0.92
CPD1YGR247W YFT2Q06676 274 aa9.33□□□□□ -0.92
CPD1YGR247W NAG1Q8TGN9 163 aa9.33□□□□□ -0.92
CPD1YGR247W IRA1P18963 3092 aa9.33□□□□□ -0.92
CPD1YGR247W MET16P18408 261 aaPredicted RBP9.32□□□□□ -0.92
CPD1YGR247W WBP1P33767 430 aaKnown RBP9.32□□□□□ -0.92
CPD1YGR247W RRM3P38766 723 aa9.32□□□□□ -0.92
CPD1YGR247W STL1P39932 569 aa9.32□□□□□ -0.92
CPD1YGR247W EDC3P39998 551 aaKnown RBP9.32□□□□□ -0.92
CPD1YGR247W YER189WP40104 122 aa9.32□□□□□ -0.92
CPD1YGR247W LTP1P40347 161 aa9.32□□□□□ -0.92
CPD1YGR247W KTR7P40504 517 aa9.32□□□□□ -0.92
CPD1YGR247W CNN1P43618 361 aa9.32□□□□□ -0.92
CPD1YGR247W AMA1P50082 593 aa9.32□□□□□ -0.92
CPD1YGR247W AIM14P53109 570 aa9.32□□□□□ -0.92
CPD1YGR247W YNR063WP53749 607 aa9.32□□□□□ -0.92
CPD1YGR247W PRM1P53835 661 aa9.32□□□□□ -0.92
CPD1YGR247W SWS2P53937 143 aa9.32□□□□□ -0.92
CPD1YGR247W YPL113CQ02961 396 aa9.32□□□□□ -0.92
CPD1YGR247W PIR1Q03178 341 aa9.32□□□□□ -0.92
CPD1YGR247W ADI1Q03677 179 aa9.32□□□□□ -0.92
CPD1YGR247W TRM82Q03774 444 aa9.32□□□□□ -0.92
CPD1YGR247W ARA2Q04212 335 aa9.32□□□□□ -0.92
CPD1YGR247W YLR456WQ06199 204 aa9.32□□□□□ -0.92
CPD1YGR247W YDL073WQ07454 984 aa9.32□□□□□ -0.92
CPD1YGR247W CIR2Q08822 631 aa9.32□□□□□ -0.92
CPD1YGR247W APL5Q08951 932 aaKnown RBP9.32□□□□□ -0.92
CPD1YGR247W APC11Q12157 165 aa9.32□□□□□ -0.92
CPD1YGR247W POL2P21951 2222 aaKnown RBP9.32□□□□□ -0.92
CPD1YGR247W HIS1P00498 297 aaKnown RBP9.31□□□□□ -0.92
CPD1YGR247W BI2P03873 423 aa9.31□□□□□ -0.92
CPD1YGR247W SEC1P30619 724 aaKnown RBP9.31□□□□□ -0.92
CPD1YGR247W SMC1P32908 1225 aa9.31□□□□□ -0.92
CPD1YGR247W FSH1P38777 243 aaKnown RBP9.31□□□□□ -0.92
CPD1YGR247W YJL070CP40361 888 aa9.31□□□□□ -0.92
CPD1YGR247W TMA108P40462 946 aa9.31□□□□□ -0.92
CPD1YGR247W ASG1P40467 964 aa9.31□□□□□ -0.92
CPD1YGR247W YGR283CP53336 341 aaPredicted RBP9.31□□□□□ -0.92
CPD1YGR247W SUN4P53616 420 aa9.31□□□□□ -0.92
CPD1YGR247W YPR078CQ06813 372 aa9.31□□□□□ -0.92
CPD1YGR247W ALR1Q08269 859 aa9.31□□□□□ -0.92
CPD1YGR247W YOR059CQ08448 450 aaKnown RBP9.31□□□□□ -0.92
CPD1YGR247W CWC2Q12046 339 aaPredicted RBP9.31□□□□□ -0.92
CPD1YGR247W LSP1Q12230 341 aaKnown RBP9.31□□□□□ -0.92
CPD1YGR247W Q0182Q9ZZW1 134 aa9.31□□□□□ -0.92
CPD1YGR247W BI3Q9ZZW7 517 aa9.31□□□□□ -0.92
CPD1YGR247W MIS1P09440 975 aaKnown RBP9.3□□□□□ -0.92
CPD1YGR247W ADD66P36040 267 aa9.3□□□□□ -0.92
CPD1YGR247W YKL151CP36059 337 aa9.3□□□□□ -0.92
CPD1YGR247W KAP104P38217 918 aaKnown RBP9.3□□□□□ -0.92
CPD1YGR247W EXO5P38289 585 aa9.3□□□□□ -0.92
CPD1YGR247W MIP6P38760 659 aaKnown RBP9.3□□□□□ -0.92
CPD1YGR247W FET5P43561 622 aa9.3□□□□□ -0.92
CPD1YGR247W SNG1P46950 547 aa9.3□□□□□ -0.92
CPD1YGR247W YTP1P53584 459 aa9.3□□□□□ -0.92
CPD1YGR247W SND1Q04007 877 aa9.3□□□□□ -0.92
CPD1YGR247W BRR2P32639 2163 aaKnown RBP9.3□□□□□ -0.92
CPD1YGR247W RPL1AP0CX43 217 aaKnown RBP9.29□□□□□ -0.92
CPD1YGR247W RPL1BP0CX44 217 aaKnown RBP9.29□□□□□ -0.92
CPD1YGR247W KAR3P17119 729 aa9.29□□□□□ -0.92
CPD1YGR247W EST1P17214 699 aaPredicted RBP9.29□□□□□ -0.92
CPD1YGR247W LIP5P32875 414 aa9.29□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms