RNA–Protein interactions for RNA: YFL002W-A

YFL002W-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YFL002W-A, Length 5,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-AYFL002W-A ATG11Q12527 1178 aa3.11□□□□□ -1.91
YFL002W-AYFL002W-A GCN4P03069 281 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A LCB1P25045 558 aaKnown RBP3.1□□□□□ -1.91
YFL002W-AYFL002W-A TRK2P28584 889 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A GPI10P30777 616 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A DSD1P53095 428 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A YCG1Q06680 1035 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A SMF3Q12078 473 aaPredicted RBP3.1□□□□□ -1.91
YFL002W-AYFL002W-A YVC1Q12324 675 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A PFK2P16862 959 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
YFL002W-AYFL002W-A CTF8P38877 133 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A CIR1P42940 261 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A GSM1P42950 618 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A YML119WQ03208 357 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A CRD1Q07560 283 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A ENT4Q07872 247 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A REX3Q12090 404 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A SVS1Q12254 260 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A CET1O13297 549 aaPredicted RBP3.1□□□□□ -1.91
YFL002W-AYFL002W-A YCK1P23291 538 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A SRO77P38163 1010 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A TAF4P50105 388 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A MSC2Q03455 724 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A GET3Q12154 354 aaKnown RBP3.1□□□□□ -1.91
YFL002W-AYFL002W-A COX17Q12287 69 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A SPE4Q12455 300 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A STE50P25344 346 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A TAF5P38129 798 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A LYS9P38999 446 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A YJR061WP40355 935 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A ARC1P46672 376 aaKnown RBP3.1□□□□□ -1.91
YFL002W-AYFL002W-A TAM41P53230 385 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A SIZ1Q04195 904 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A RPC11Q04307 110 aaPredicted RBP3.1□□□□□ -1.91
YFL002W-AYFL002W-A YPL277CQ08989 487 aa3.1□□□□□ -1.91
YFL002W-AYFL002W-A FRS1P15624 595 aaKnown RBP3.09□□□□□ -1.91
YFL002W-AYFL002W-A PUP2P32379 260 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A MAC1P35192 417 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A YHR218WP38899 603 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A YNL195CP40168 261 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A YIL108WP40483 696 aaKnown RBP3.09□□□□□ -1.91
YFL002W-AYFL002W-A SSY5P47002 699 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A INN1P53901 409 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A MAP1Q01662 387 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
YFL002W-AYFL002W-A TIM50Q02776 476 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A OSW2Q12202 724 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A THR1P17423 357 aaKnown RBP3.09□□□□□ -1.91
YFL002W-AYFL002W-A GLK1P17709 500 aaKnown RBP3.09□□□□□ -1.91
YFL002W-AYFL002W-A EFT1P32324 842 aaKnown RBP3.09□□□□□ -1.91
YFL002W-AYFL002W-A STE14P32584 239 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A GCS1P35197 352 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A FSH1P38777 243 aaKnown RBP3.09□□□□□ -1.91
YFL002W-AYFL002W-A SKP2P42843 763 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A NNF2P53253 936 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A SLU7Q02775 382 aaKnown RBP3.09□□□□□ -1.91
YFL002W-AYFL002W-A NGL2Q03264 515 aaKnown RBP3.09□□□□□ -1.91
YFL002W-AYFL002W-A RGC1Q06108 1083 aaKnown RBP3.09□□□□□ -1.91
YFL002W-AYFL002W-A AIM6Q07716 390 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A SKS1Q12505 502 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A TY2A-LR1P0C2J4 438 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A TY2A-FP0CX61 438 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A TY2A-GR2P0CX62 438 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A HMG2P12684 1045 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A ADE2P21264 571 aaKnown RBP3.09□□□□□ -1.91
YFL002W-AYFL002W-A TY2A-CP25383 438 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A PET127P32606 800 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A CCT6P39079 546 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A EXG2P52911 562 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A GPD1Q00055 391 aaKnown RBP3.09□□□□□ -1.91
YFL002W-AYFL002W-A TY2A-DR2Q03483 438 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A ERB1Q04660 807 aaKnown RBP3.09□□□□□ -1.91
YFL002W-AYFL002W-A ISA1Q07821 250 aaPredicted RBP3.09□□□□□ -1.91
YFL002W-AYFL002W-A ESC8Q08119 714 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A TY2A-BQ12260 438 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A TY2A-OR2Q12293 438 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A TY2A-DR1Q12392 438 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A TY2A-OR1Q12439 438 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A PAR32Q12515 295 aaKnown RBP3.09□□□□□ -1.91
YFL002W-AYFL002W-A TY2A-DR3Q99303 438 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A VCX1Q99385 411 aa3.09□□□□□ -1.91
YFL002W-AYFL002W-A TUB3P09734 445 aaKnown RBP3.09□□□□□ -1.92
YFL002W-AYFL002W-A CRG1P38892 291 aaRIP-Chip data3.09□□□□□ -1.92not detected
YFL002W-AYFL002W-A FLC2P39719 783 aa3.09□□□□□ -1.92
YFL002W-AYFL002W-A TIM11P81449 96 aaPredicted RBP3.09□□□□□ -1.92
YFL002W-AYFL002W-A PUS1Q12211 544 aaKnown RBP3.09□□□□□ -1.92
YFL002W-AYFL002W-A REC107P21651 314 aa3.08□□□□□ -1.92
YFL002W-AYFL002W-A ERG6P25087 383 aaKnown RBP3.08□□□□□ -1.92
YFL002W-AYFL002W-A SRO9P25567 434 aaKnown RBP3.08□□□□□ -1.92
YFL002W-AYFL002W-A BUD16P39988 312 aa3.08□□□□□ -1.92
YFL002W-AYFL002W-A ENP2P48234 707 aaKnown RBP3.08□□□□□ -1.92
YFL002W-AYFL002W-A ORC4P54791 529 aa3.08□□□□□ -1.92
YFL002W-AYFL002W-A PRO2P54885 456 aaKnown RBP3.08□□□□□ -1.92
YFL002W-AYFL002W-A MUS81Q04149 632 aaPredicted RBP3.08□□□□□ -1.92
YFL002W-AYFL002W-A RPS4AP0CX35 261 aaKnown RBP3.08□□□□□ -1.92
YFL002W-AYFL002W-A RPS4BP0CX36 261 aaKnown RBP3.08□□□□□ -1.92
YFL002W-AYFL002W-A PRP22P24384 1145 aaKnown RBP3.08□□□□□ -1.92
YFL002W-AYFL002W-A SRP101P32916 621 aa3.08□□□□□ -1.92
YFL002W-AYFL002W-A TEF4P36008 412 aaKnown RBP3.08□□□□□ -1.92
YFL002W-AYFL002W-A POP2P39008 433 aa3.08□□□□□ -1.92
YFL002W-AYFL002W-A KHA1P40309 873 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms