RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C NOP9P47077 666 aaKnown RBP1.5□□□□□ -2.17
SWI4YER111C MUP1P50276 574 aa1.5□□□□□ -2.17
SWI4YER111C MNT2P53059 558 aa1.5□□□□□ -2.17
SWI4YER111C MTL1P53214 551 aa1.5□□□□□ -2.17
SWI4YER111C HMI1Q12039 706 aa1.5□□□□□ -2.17
SWI4YER111C POM34Q12445 299 aa1.5□□□□□ -2.17
SWI4YER111C TRM11Q12463 433 aa1.5□□□□□ -2.17
SWI4YER111C DFG16Q99234 619 aa1.5□□□□□ -2.17
SWI4YER111C TY1B-NL2Q99337 1749 aaKnown RBP1.5□□□□□ -2.17
SWI4YER111C YLR302CO13544 120 aa1.49□□□□□ -2.17
SWI4YER111C ACO1P19414 778 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
SWI4YER111C KAR4P25583 335 aa1.49□□□□□ -2.17
SWI4YER111C SWC3P31376 625 aa1.49□□□□□ -2.17
SWI4YER111C MF(ALPHA)2P32435 120 aa1.49□□□□□ -2.17
SWI4YER111C MFT1P33441 392 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C SSP120P39931 234 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C URM1P40554 99 aaPredicted RBP1.49□□□□□ -2.17
SWI4YER111C SKP2P42843 763 aa1.49□□□□□ -2.17
SWI4YER111C LSB3P43603 459 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C NCS6P53088 359 aa1.49□□□□□ -2.17
SWI4YER111C YNR071CP53757 342 aa1.49□□□□□ -2.17
SWI4YER111C NSE5Q03718 556 aa1.49□□□□□ -2.17
SWI4YER111C VPS64Q03944 604 aa1.49□□□□□ -2.17
SWI4YER111C TMA10Q06177 86 aa1.49□□□□□ -2.17
SWI4YER111C IWR1Q07532 353 aaPredicted RBP1.49□□□□□ -2.17
SWI4YER111C DIN7Q12086 430 aa1.49□□□□□ -2.17
SWI4YER111C CLF1Q12309 687 aaPredicted RBP1.49□□□□□ -2.17
SWI4YER111C TY2B-BQ12491 1770 aa1.49□□□□□ -2.17
SWI4YER111C LEU2P04173 364 aaPredicted RBP1.49□□□□□ -2.17
SWI4YER111C TUB3P09734 445 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C CAF20P12962 161 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C GUK1P15454 187 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C NCP1P16603 691 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C TUP1P16649 713 aa1.49□□□□□ -2.17
SWI4YER111C SAN1P22470 610 aa1.49□□□□□ -2.17
SWI4YER111C ARG1P22768 420 aa1.49□□□□□ -2.17
SWI4YER111C CWH43P25618 953 aa1.49□□□□□ -2.17
SWI4YER111C CDC20P26309 610 aa1.49□□□□□ -2.17
SWI4YER111C ARP2P32381 391 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C PUB1P32588 453 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
SWI4YER111C XRS2P33301 854 aa1.49□□□□□ -2.17
SWI4YER111C EHT1P38295 451 aa1.49□□□□□ -2.17
SWI4YER111C PIG2P40187 538 aa1.49□□□□□ -2.17
SWI4YER111C KHA1P40309 873 aa1.49□□□□□ -2.17
SWI4YER111C MAD2P40958 196 aa1.49□□□□□ -2.17
SWI4YER111C LYS14P40971 790 aa1.49□□□□□ -2.17
SWI4YER111C CHA4P43634 648 aa1.49□□□□□ -2.17
SWI4YER111C BIT61P47041 543 aa1.49□□□□□ -2.17
SWI4YER111C MCM6P53091 1017 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C CPR6P53691 371 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C YPL062WQ02781 134 aa1.49□□□□□ -2.17
SWI4YER111C SPC19Q03954 165 aa1.49□□□□□ -2.17
SWI4YER111C AAD4Q07747 329 aa1.49□□□□□ -2.17
SWI4YER111C SKM1Q12469 655 aa1.49□□□□□ -2.17
SWI4YER111C HRP1Q99383 534 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C GEA2P39993 1459 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C TRM3Q07527 1436 aa1.49□□□□□ -2.17
SWI4YER111C RPS13P05756 151 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C SIR1P21691 654 aa1.49□□□□□ -2.17
SWI4YER111C FEN2P25621 512 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C PRE4P30657 266 aa1.49□□□□□ -2.17
SWI4YER111C NUP120P35729 1037 aa1.49□□□□□ -2.17
SWI4YER111C KTR3P38130 404 aaPredicted RBP1.49□□□□□ -2.17
SWI4YER111C AIM3P38266 947 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C IFA38P38286 347 aa1.49□□□□□ -2.17
SWI4YER111C YIR042CP40586 236 aa1.49□□□□□ -2.17
SWI4YER111C VPS62P53285 467 aa1.49□□□□□ -2.17
SWI4YER111C TIM50Q02776 476 aa1.49□□□□□ -2.17
SWI4YER111C YPL108WQ02872 168 aaPredicted RBP1.49□□□□□ -2.17
SWI4YER111C DLT1Q04216 342 aa1.49□□□□□ -2.17
SWI4YER111C EIS1Q05050 843 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C HOF1Q05080 669 aa1.49□□□□□ -2.17
SWI4YER111C NOP12Q08208 459 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C ICL2Q12031 575 aa1.49□□□□□ -2.17
SWI4YER111C LYS21Q12122 440 aaKnown RBP1.49□□□□□ -2.17
SWI4YER111C MED1Q12321 566 aa1.49□□□□□ -2.17
SWI4YER111C ZRT2Q12436 422 aa1.49□□□□□ -2.17
SWI4YER111C BET2P20133 325 aa1.48□□□□□ -2.17
SWI4YER111C IME1P21190 360 aa1.48□□□□□ -2.17
SWI4YER111C UBC1P21734 215 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C GAS1P22146 559 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C PEX1P24004 1043 aa1.48□□□□□ -2.17
SWI4YER111C YCL049CP25577 312 aa1.48□□□□□ -2.17
SWI4YER111C BCS1P32839 456 aa1.48□□□□□ -2.17
SWI4YER111C SET3P36124 751 aa1.48□□□□□ -2.17
SWI4YER111C YBR138CP38277 524 aa1.48□□□□□ -2.17
SWI4YER111C SIC1P38634 284 aa1.48□□□□□ -2.17
SWI4YER111C REV7P38927 245 aa1.48□□□□□ -2.17
SWI4YER111C AXL2P38928 823 aa1.48□□□□□ -2.17
SWI4YER111C FTR1P40088 404 aa1.48□□□□□ -2.17
SWI4YER111C MRPS35P53292 345 aa1.48□□□□□ -2.17
SWI4YER111C RBG2P53295 368 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C ARC35P53731 342 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C RPT6Q01939 405 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C SNO4Q04902 237 aa1.48□□□□□ -2.17
SWI4YER111C TRI1Q05024 226 aa1.48□□□□□ -2.17
SWI4YER111C VID22Q05934 901 aa1.48□□□□□ -2.17
SWI4YER111C YFT2Q06676 274 aa1.48□□□□□ -2.17
SWI4YER111C CSR1Q06705 408 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C HSP33Q08914 237 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms