RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A SSD1P24276 1250 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
SDH6YDR379C-A BRN1P38170 754 aa1.47□□□□□ -2.17
SDH6YDR379C-A MNN1P39106 762 aa1.47□□□□□ -2.17
SDH6YDR379C-A YND1P40009 630 aa1.47□□□□□ -2.17
SDH6YDR379C-A SAP4P53036 818 aa1.47□□□□□ -2.17
SDH6YDR379C-A BRE5P53741 515 aaKnown RBP1.47□□□□□ -2.17
SDH6YDR379C-A TGS1Q12052 315 aa1.47□□□□□ -2.17
SDH6YDR379C-A HSP60P19882 572 aaKnown RBP1.46□□□□□ -2.18
SDH6YDR379C-A MCD4P36051 919 aa1.46□□□□□ -2.18
SDH6YDR379C-A HUL4P40985 892 aa1.46□□□□□ -2.18
SDH6YDR379C-A VTC3Q02725 835 aa1.46□□□□□ -2.18
SDH6YDR379C-A ECM16Q04217 1267 aaKnown RBP1.46□□□□□ -2.18
SDH6YDR379C-A VBA4Q04602 768 aaKnown RBP1.46□□□□□ -2.18
SDH6YDR379C-A VHS3Q08438 674 aa1.46□□□□□ -2.18
SDH6YDR379C-A PCL8Q08966 492 aa1.46□□□□□ -2.18
SDH6YDR379C-A YJU2P28320 278 aaPredicted RBP1.45□□□□□ -2.18
SDH6YDR379C-A RKM3P38222 552 aa1.45□□□□□ -2.18
SDH6YDR379C-A VAC8P39968 578 aa1.45□□□□□ -2.18
SDH6YDR379C-A RPS15Q01855 142 aaKnown RBP1.45□□□□□ -2.18
SDH6YDR379C-A TAF8Q03750 510 aa1.45□□□□□ -2.18
SDH6YDR379C-A YER175W-AQ8TGU4 54 aa1.45□□□□□ -2.18
SDH6YDR379C-A CET1O13297 549 aaPredicted RBP1.44□□□□□ -2.18
SDH6YDR379C-A CIT1P00890 479 aa1.44□□□□□ -2.18
SDH6YDR379C-A SRD1P09007 221 aa1.44□□□□□ -2.18
SDH6YDR379C-A FRS1P15624 595 aaKnown RBP1.44□□□□□ -2.18
SDH6YDR379C-A LDB16P25587 256 aa1.44□□□□□ -2.18
SDH6YDR379C-A CPR3P25719 182 aa1.44□□□□□ -2.18
SDH6YDR379C-A IMD2P38697 523 aaKnown RBP1.44□□□□□ -2.18
SDH6YDR379C-A IMD3P50095 523 aaKnown RBP1.44□□□□□ -2.18
SDH6YDR379C-A CRZ1P53968 678 aa1.44□□□□□ -2.18
SDH6YDR379C-A SND1Q04007 877 aa1.44□□□□□ -2.18
SDH6YDR379C-A YLR281CQ05863 155 aa1.44□□□□□ -2.18
SDH6YDR379C-A PNO1Q99216 274 aaKnown RBP1.44□□□□□ -2.18
SDH6YDR379C-A PET127P32606 800 aa1.43□□□□□ -2.18
SDH6YDR379C-A BET3P36149 193 aa1.43□□□□□ -2.18
SDH6YDR379C-A YHR202WP38887 602 aa1.43□□□□□ -2.18
SDH6YDR379C-A YGR054WP53235 642 aaKnown RBP1.43□□□□□ -2.18
SDH6YDR379C-A FMP42Q04991 504 aa1.43□□□□□ -2.18
SDH6YDR379C-A JIP5Q06214 492 aaPredicted RBP1.43□□□□□ -2.18
SDH6YDR379C-A CYK3Q07533 885 aa1.43□□□□□ -2.18
SDH6YDR379C-A AHA1Q12449 350 aaKnown RBP1.43□□□□□ -2.18
SDH6YDR379C-A ILS1P09436 1072 aaKnown RBP1.42□□□□□ -2.18
SDH6YDR379C-A MIH1P23748 554 aa1.42□□□□□ -2.18
SDH6YDR379C-A MTC2P34246 357 aa1.42□□□□□ -2.18
SDH6YDR379C-A YPT10P38146 199 aa1.42□□□□□ -2.18
SDH6YDR379C-A YPT11P48559 417 aa1.42□□□□□ -2.18
SDH6YDR379C-A ALD6P54115 500 aaKnown RBP1.42□□□□□ -2.18
SDH6YDR379C-A CIT2P08679 460 aa1.41□□□□□ -2.18
SDH6YDR379C-A PRP22P24384 1145 aaKnown RBP1.41□□□□□ -2.18
SDH6YDR379C-A GRX1P25373 110 aaKnown RBP1.41□□□□□ -2.18
SDH6YDR379C-A SWH1P35845 1188 aa1.41□□□□□ -2.18
SDH6YDR379C-A MNN4P36044 1178 aa1.41□□□□□ -2.18
SDH6YDR379C-A BZZ1P38822 633 aa1.41□□□□□ -2.18
SDH6YDR379C-A SIM1P40472 476 aa1.41□□□□□ -2.18
SDH6YDR379C-A TLG2Q08144 397 aa1.41□□□□□ -2.18
SDH6YDR379C-A GSH2Q08220 491 aa1.41□□□□□ -2.18
SDH6YDR379C-A GPN2Q08726 347 aaPredicted RBP1.41□□□□□ -2.18
SDH6YDR379C-A RPL42AP0CX27 106 aaKnown RBP1.4□□□□□ -2.19
SDH6YDR379C-A RPL42BP0CX28 106 aaKnown RBP1.4□□□□□ -2.19
SDH6YDR379C-A SEC18P18759 758 aaKnown RBP1.4□□□□□ -2.19
SDH6YDR379C-A FTH1P38310 465 aa1.4□□□□□ -2.19
SDH6YDR379C-A SSZ1P38788 538 aaKnown RBP1.4□□□□□ -2.19
SDH6YDR379C-A KRE9P39005 276 aa1.4□□□□□ -2.19
SDH6YDR379C-A CIN1P40987 1014 aa1.4□□□□□ -2.19
SDH6YDR379C-A YGR125WP53273 1036 aa1.4□□□□□ -2.19
SDH6YDR379C-A TIM50Q02776 476 aa1.4□□□□□ -2.19
SDH6YDR379C-A ECM22Q05958 814 aaPredicted RBP1.4□□□□□ -2.19
SDH6YDR379C-A PFA4Q12006 378 aa1.4□□□□□ -2.19
SDH6YDR379C-A MAK32P23060 363 aa1.39□□□□□ -2.19
SDH6YDR379C-A STO1P34160 861 aaKnown RBP1.39□□□□□ -2.19
SDH6YDR379C-A DHR2P36009 735 aaPredicted RBP1.39□□□□□ -2.19
SDH6YDR379C-A CCL1P37366 393 aa1.39□□□□□ -2.19
SDH6YDR379C-A SNP1Q00916 300 aaPredicted RBP1.39□□□□□ -2.19
SDH6YDR379C-A FDC1Q03034 503 aa1.39□□□□□ -2.19
SDH6YDR379C-A NHX1Q04121 633 aa1.39□□□□□ -2.19
SDH6YDR379C-A MRN1Q08925 612 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
SDH6YDR379C-A GET3Q12154 354 aaKnown RBP1.39□□□□□ -2.19
SDH6YDR379C-A YML002WP0CF17 737 aa1.38□□□□□ -2.19
SDH6YDR379C-A CDC23P16522 626 aa1.38□□□□□ -2.19
SDH6YDR379C-A GPD1Q00055 391 aaKnown RBP1.38□□□□□ -2.19
SDH6YDR379C-A RCR2Q03446 210 aaKnown RBP1.38□□□□□ -2.19
SDH6YDR379C-A CYB2P00175 591 aa1.37□□□□□ -2.19
SDH6YDR379C-A HOP1P20050 605 aa1.37□□□□□ -2.19
SDH6YDR379C-A CAP1P28495 268 aaKnown RBP1.37□□□□□ -2.19
SDH6YDR379C-A HES1P35843 434 aa1.37□□□□□ -2.19
SDH6YDR379C-A AVT5P38176 459 aa1.37□□□□□ -2.19
SDH6YDR379C-A YNL058CP53947 316 aa1.37□□□□□ -2.19
SDH6YDR379C-A RRI1Q12468 440 aa1.37□□□□□ -2.19
SDH6YDR379C-A CNA1P23287 553 aa1.36□□□□□ -2.19
SDH6YDR379C-A NUG1P40010 520 aaKnown RBP1.36□□□□□ -2.19
SDH6YDR379C-A CAF16P43569 289 aa1.36□□□□□ -2.19
SDH6YDR379C-A YJR039WP47107 1121 aa1.36□□□□□ -2.19
SDH6YDR379C-A RTA1P53047 317 aa1.36□□□□□ -2.19
SDH6YDR379C-A YNL144CP53907 740 aa1.36□□□□□ -2.19
SDH6YDR379C-A YOR131CQ12486 218 aa1.36□□□□□ -2.19
SDH6YDR379C-A CBS2P14905 389 aa1.35□□□□□ -2.19
SDH6YDR379C-A IMG2P25642 146 aaPredicted RBP1.35□□□□□ -2.19
SDH6YDR379C-A YHR218WP38899 603 aa1.35□□□□□ -2.19
SDH6YDR379C-A PXA1P41909 870 aa1.35□□□□□ -2.19
SDH6YDR379C-A AAC1P04710 309 aa1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms