RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C SNT1P25357 1226 aa2.34□□□□□ -2.03
SSD1YDR293C SEC65P29478 273 aa2.34□□□□□ -2.03
SSD1YDR293C UBS1P38290 277 aa2.34□□□□□ -2.03
SSD1YDR293C TAT2P38967 592 aa2.34□□□□□ -2.03
SSD1YDR293C CSM2P40465 213 aa2.34□□□□□ -2.03
SSD1YDR293C YJL132WP47014 750 aa2.34□□□□□ -2.03
SSD1YDR293C TIM8P57744 87 aa2.34□□□□□ -2.03
SSD1YDR293C PTA1Q01329 785 aaPredicted RBP2.34□□□□□ -2.03
SSD1YDR293C GTB1Q04924 702 aa2.34□□□□□ -2.03
SSD1YDR293C GIC2Q06648 383 aa2.34□□□□□ -2.03
SSD1YDR293C CMS1Q07897 291 aaKnown RBP2.34□□□□□ -2.03
SSD1YDR293C TMA16Q08687 178 aa2.34□□□□□ -2.03
SSD1YDR293C AFT2Q08957 416 aa2.34□□□□□ -2.03
SSD1YDR293C AIM41Q12032 185 aa2.34□□□□□ -2.03
SSD1YDR293C YKL068W-AQ3E826 78 aa2.34□□□□□ -2.03
SSD1YDR293C PRE10P21242 288 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
SSD1YDR293C IRE1P32361 1115 aa2.34□□□□□ -2.03
SSD1YDR293C SCD5P34758 872 aa2.34□□□□□ -2.03
SSD1YDR293C MRP8P35719 219 aa2.34□□□□□ -2.03
SSD1YDR293C VPS21P36017 210 aaKnown RBP2.34□□□□□ -2.03
SSD1YDR293C SHM1P37292 490 aaPredicted RBP2.34□□□□□ -2.03
SSD1YDR293C CCL1P37366 393 aa2.34□□□□□ -2.03
SSD1YDR293C SUL1P38359 859 aa2.34□□□□□ -2.03
SSD1YDR293C PCA1P38360 1216 aa2.34□□□□□ -2.03
SSD1YDR293C NTA1P40354 457 aa2.34□□□□□ -2.03
SSD1YDR293C AIR1P40507 360 aaKnown RBP2.34□□□□□ -2.03
SSD1YDR293C IRR1P40541 1150 aa2.34□□□□□ -2.03
SSD1YDR293C YIR042CP40586 236 aa2.34□□□□□ -2.03
SSD1YDR293C SLS1P42900 643 aa2.34□□□□□ -2.03
SSD1YDR293C LSB6P42951 607 aa2.34□□□□□ -2.03
SSD1YDR293C TOS3P43637 560 aa2.34□□□□□ -2.03
SSD1YDR293C SAE2P46946 345 aa2.34□□□□□ -2.03
SSD1YDR293C IML2P47031 731 aa2.34□□□□□ -2.03
SSD1YDR293C YJR079WP47126 109 aa2.34□□□□□ -2.03
SSD1YDR293C MET13P53128 600 aa2.34□□□□□ -2.03
SSD1YDR293C MET14Q02196 202 aa2.34□□□□□ -2.03
SSD1YDR293C YMR114CQ04471 368 aaKnown RBP2.34□□□□□ -2.03
SSD1YDR293C UFO1Q04511 668 aa2.34□□□□□ -2.03
SSD1YDR293C GRX8Q05926 109 aa2.34□□□□□ -2.03
SSD1YDR293C GPM3Q12326 303 aa2.34□□□□□ -2.03
SSD1YDR293C YLR462WO13556 202 aa2.34□□□□□ -2.04
SSD1YDR293C CDC33P07260 213 aaKnown RBP2.34□□□□□ -2.04
SSD1YDR293C MPH2P0CD99 609 aa2.34□□□□□ -2.04
SSD1YDR293C GPA2P10823 449 aa2.34□□□□□ -2.04
SSD1YDR293C SPO12P17123 173 aa2.34□□□□□ -2.04
SSD1YDR293C ATP7P30902 174 aa2.34□□□□□ -2.04
SSD1YDR293C HEM12P32347 362 aaPredicted RBP2.34□□□□□ -2.04
SSD1YDR293C YBL055CP34220 418 aaPredicted RBP2.34□□□□□ -2.04
SSD1YDR293C COY1P34237 679 aa2.34□□□□□ -2.04
SSD1YDR293C GPT2P36148 743 aa2.34□□□□□ -2.04
SSD1YDR293C HEK2P38199 381 aaKnown RBP RIP-Chip data2.34□□□□□ -2.04 RIP-Chip
SSD1YDR293C SHE3P38272 425 aaKnown RBP2.34□□□□□ -2.04
SSD1YDR293C YHL049CP38722 271 aa2.34□□□□□ -2.04
SSD1YDR293C YEL075CP39972 122 aa2.34□□□□□ -2.04
SSD1YDR293C YER189WP40104 122 aa2.34□□□□□ -2.04
SSD1YDR293C MEP1P40260 492 aa2.34□□□□□ -2.04
SSD1YDR293C YFL064CP43540 174 aa2.34□□□□□ -2.04
SSD1YDR293C BRO1P48582 844 aa2.34□□□□□ -2.04
SSD1YDR293C CUL3P53202 744 aa2.34□□□□□ -2.04
SSD1YDR293C PEX31P53203 462 aa2.34□□□□□ -2.04
SSD1YDR293C CEF1Q03654 590 aaPredicted RBP2.34□□□□□ -2.04
SSD1YDR293C UTP14Q04500 899 aaKnown RBP2.34□□□□□ -2.04
SSD1YDR293C IVY1Q04934 453 aa2.34□□□□□ -2.04
SSD1YDR293C THI7Q05998 598 aa2.34□□□□□ -2.04
SSD1YDR293C GGA1Q06336 557 aa2.34□□□□□ -2.04
SSD1YDR293C ADY3Q07732 790 aa2.34□□□□□ -2.04
SSD1YDR293C PSR2Q07949 397 aa2.34□□□□□ -2.04
SSD1YDR293C YBL111CQ3E7Y5 667 aa2.34□□□□□ -2.04
SSD1YDR293C YLR278CQ05854 1341 aa2.34□□□□□ -2.04
SSD1YDR293C PMD1P32634 1753 aa2.33□□□□□ -2.04
SSD1YDR293C YEL076C-AP0CX16 216 aa2.33□□□□□ -2.04
SSD1YDR293C YLR464WP0CX17 216 aa2.33□□□□□ -2.04
SSD1YDR293C STE6P12866 1290 aa2.33□□□□□ -2.04
SSD1YDR293C PUT4P15380 627 aa2.33□□□□□ -2.04
SSD1YDR293C PDC6P26263 563 aaKnown RBP2.33□□□□□ -2.04
SSD1YDR293C STV1P37296 890 aa2.33□□□□□ -2.04
SSD1YDR293C MRPL16P38064 232 aa2.33□□□□□ -2.04
SSD1YDR293C NAB3P38996 802 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
SSD1YDR293C PRM9P39551 298 aa2.33□□□□□ -2.04
SSD1YDR293C YEL076CP39971 216 aa2.33□□□□□ -2.04
SSD1YDR293C TMA108P40462 946 aa2.33□□□□□ -2.04
SSD1YDR293C HOS4P40480 1083 aa2.33□□□□□ -2.04
SSD1YDR293C MNN11P46985 422 aaKnown RBP2.33□□□□□ -2.04
SSD1YDR293C PMT3P47190 753 aa2.33□□□□□ -2.04
SSD1YDR293C AZR1P50080 613 aa2.33□□□□□ -2.04
SSD1YDR293C FMS1P50264 508 aa2.33□□□□□ -2.04
SSD1YDR293C MIG2P53035 382 aa2.33□□□□□ -2.04
SSD1YDR293C SPC105P53148 917 aa2.33□□□□□ -2.04
SSD1YDR293C HFD1Q04458 532 aa2.33□□□□□ -2.04
SSD1YDR293C APL4Q12028 832 aa2.33□□□□□ -2.04
SSD1YDR293C CBP2P03874 630 aaPredicted RBP2.33□□□□□ -2.04
SSD1YDR293C MST1P07236 462 aa2.33□□□□□ -2.04
SSD1YDR293C CHS2P14180 963 aa2.33□□□□□ -2.04
SSD1YDR293C AEP2P22136 580 aa2.33□□□□□ -2.04
SSD1YDR293C MKK2P32491 506 aa2.33□□□□□ -2.04
SSD1YDR293C MCD4P36051 919 aa2.33□□□□□ -2.04
SSD1YDR293C MMS4P38257 691 aa2.33□□□□□ -2.04
SSD1YDR293C YHR054CP38780 354 aa2.33□□□□□ -2.04
SSD1YDR293C PEX18P38855 283 aa2.33□□□□□ -2.04
SSD1YDR293C SPC97P38863 823 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms