RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	PEX29	Q03370	554 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	LIP2	Q06005	328 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	SHS1	Q07657	551 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	PIN2	Q12057	282 aa		4.63	□□□□□ -1.67
YDR261C-D	YDR261C-D	BUD4	P47136	1447 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	RPL24A	P04449	155 aa	Known RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	KRS1	P15180	591 aa	Known RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	CLN1	P20437	546 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	CMK1	P27466	446 aa	Known RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	SEC1	P30619	724 aa	Known RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	ASF2	P32448	525 aa	Predicted RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	ATG19	P35193	415 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	YPT31	P38555	223 aa	Known RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	SIC1	P38634	284 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	MNL1	P38888	796 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	CTF19	Q02732	369 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	HOF1	Q05080	669 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	TFB4	Q12004	338 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	NTO1	Q12311	748 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	SSA3	P09435	649 aa	Known RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	KIN1	P13185	1064 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	FBA1	P14540	359 aa	Known RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	MER1	P16523	270 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	PRI2	P20457	528 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	URA1	P28272	314 aa	Predicted RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	PAN5	P38787	379 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	VAB2	P40003	282 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	YJR142W	P47173	342 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	ATP22	P50273	684 aa	Predicted RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	GTF1	P53260	183 aa	Predicted RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	INP2	Q03824	705 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	APC4	Q04601	652 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	TFC6	Q06339	672 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	KCS1	Q12494	1050 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	YGR161W-C	Q3E744	92 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	RSR1	P13856	272 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	CST26	P38226	397 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	ATM1	P40416	690 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	ARC1	P46672	376 aa	Known RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	ALD2	P47771	506 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	GTO1	P48239	356 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	REC102	Q02721	264 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	YLR225C	Q05948	407 aa	Known RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	MSC6	Q08818	692 aa	Known RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	YRM1	Q12340	786 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	IPP1	P00817	287 aa	Known RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	HPR1	P17629	752 aa	Known RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	OLE1	P21147	510 aa	Known RBP	4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	PHO91	P27514	894 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	RIM4	P38741	713 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	PSY2	P40164	858 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	OTU1	P43558	301 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	JJJ2	P46997	583 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	AAD16	Q02895	342 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	SGO1	Q08490	590 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	YPT6	Q99260	215 aa		4.62	□□□□□ -1.67
YDR261C-D	YDR261C-D	SEC4	P07560	215 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	SPE2	P21182	396 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	ADE2	P21264	571 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	DCC1	P25559	380 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	PLC1	P32383	869 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	SPS19	P32573	292 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	FBP26	P32604	452 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	RIB7	P33312	244 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	KTR2	P33550	425 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	PEX6	P33760	1030 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	GRX7	P38068	203 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	MAL32	P38158	584 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	FUI1	P38196	639 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	YHB1	P39676	399 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	PCL7	P40186	285 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	MNT3	P40549	630 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	YBP2	P53169	641 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	MAL12	P53341	584 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	MPS1	P54199	764 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	SWP1	Q02795	286 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	RPN9	Q04062	393 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	ATG26	Q06321	1198 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
YDR261C-D	YDR261C-D	RPN8	Q08723	338 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	GPR1	Q12361	961 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	TRM10	Q12400	293 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	ADP1	P25371	1049 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	RHB1	P25378	209 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	ERG9	P29704	444 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	LYP1	P32487	611 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	YKL133C	P36066	463 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	NTR2	P36118	322 aa	Predicted RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	MRX3	P38172	270 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	YDR089W	P38966	869 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	PNT1	P38969	423 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	SER33	P40510	469 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	TEA1	P47988	759 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	NAS6	P50086	228 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	FAL1	Q12099	399 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	LYS21	Q12122	440 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	DCN1	Q12395	269 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	CDC28	P00546	298 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	ILS1	P09436	1072 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	COS2	P0CX12	379 aa		4.61	□□□□□ -1.67

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