RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	SPB1	P25582	841 aa	Predicted RBP	5.23	□□□□□ -1.57
TUP1	YCR084C	RPL8B	P29453	256 aa	Known RBP	5.23	□□□□□ -1.57
TUP1	YCR084C	RPT1	P33299	467 aa	Known RBP	5.23	□□□□□ -1.57
TUP1	YCR084C	NTC20	P38302	140 aa	Predicted RBP	5.23	□□□□□ -1.57
TUP1	YCR084C	RTC3	P38804	111 aa	Predicted RBP	5.23	□□□□□ -1.57
TUP1	YCR084C	NUP60	P39705	539 aa		5.23	□□□□□ -1.57
TUP1	YCR084C	ACA1	P39970	489 aa		5.23	□□□□□ -1.57
TUP1	YCR084C	YTA12	P40341	825 aa		5.23	□□□□□ -1.57
TUP1	YCR084C	MND2	P40577	368 aa		5.23	□□□□□ -1.57
TUP1	YCR084C	YFR006W	P43590	535 aa		5.23	□□□□□ -1.57
TUP1	YCR084C	ECL1	P48235	211 aa		5.23	□□□□□ -1.57
TUP1	YCR084C	RBG2	P53295	368 aa	Known RBP	5.23	□□□□□ -1.57
TUP1	YCR084C	ZPR1	P53303	486 aa	Known RBP	5.23	□□□□□ -1.57
TUP1	YCR084C	MRPL19	P53875	158 aa		5.23	□□□□□ -1.57
TUP1	YCR084C	SFB2	P53953	876 aa		5.23	□□□□□ -1.57
TUP1	YCR084C	RSC4	Q02206	625 aa		5.23	□□□□□ -1.57
TUP1	YCR084C	MRPS17	Q03246	237 aa	Predicted RBP	5.23	□□□□□ -1.57
TUP1	YCR084C	YLR177W	Q06251	628 aa		5.23	□□□□□ -1.57
TUP1	YCR084C	MLC2	Q06580	163 aa		5.23	□□□□□ -1.57
TUP1	YCR084C	TGS1	Q12052	315 aa		5.23	□□□□□ -1.57
TUP1	YCR084C	ACF2	Q12168	779 aa		5.23	□□□□□ -1.57
TUP1	YCR084C	SPO21	Q12411	609 aa		5.23	□□□□□ -1.57
TUP1	YCR084C	CDC8	P00572	216 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	CAN1	P04817	590 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	TYR1	P20049	452 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	MEI4	P29467	408 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	SSE1	P32589	693 aa	Known RBP	5.22	□□□□□ -1.57
TUP1	YCR084C	MSN4	P33749	630 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	MTH1	P35198	433 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	EAP1	P36041	632 aa	Known RBP	5.22	□□□□□ -1.57
TUP1	YCR084C	APM3	P38153	483 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	KAP104	P38217	918 aa	Known RBP	5.22	□□□□□ -1.57
TUP1	YCR084C	YHL017W	P38745	532 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	CCC2	P38995	1004 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	PRM9	P39551	298 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	GVP36	P40531	326 aa	Known RBP	5.22	□□□□□ -1.57
TUP1	YCR084C	HXT8	P40886	569 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	YJR039W	P47107	1121 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	VMA10	P48836	114 aa	Known RBP	5.22	□□□□□ -1.57
TUP1	YCR084C	ASE1	P50275	885 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	MON1	P53129	644 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	MNT4	P53745	580 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	KTR6	P54070	446 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	GTR1	Q00582	310 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	YPL107W	Q02873	248 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	SYF1	Q04048	859 aa	Predicted RBP	5.22	□□□□□ -1.57
TUP1	YCR084C	HCR1	Q05775	265 aa	Known RBP	5.22	□□□□□ -1.57
TUP1	YCR084C	MET7	Q08645	548 aa		5.22	□□□□□ -1.57
TUP1	YCR084C	ISY1	P21374	235 aa	Predicted RBP	5.21	□□□□□ -1.57
TUP1	YCR084C	MRPL8	P22353	238 aa		5.21	□□□□□ -1.57
TUP1	YCR084C	RPC19	P28000	142 aa	Known RBP	5.21	□□□□□ -1.57
TUP1	YCR084C	CDC12	P32468	407 aa	Known RBP	5.21	□□□□□ -1.57
TUP1	YCR084C	PRP40	P33203	583 aa	Known RBP	5.21	□□□□□ -1.57
TUP1	YCR084C	NIC96	P34077	839 aa		5.21	□□□□□ -1.57
TUP1	YCR084C	ATP3	P38077	311 aa	Known RBP	5.21	□□□□□ -1.57
TUP1	YCR084C	ECM21	P38167	1117 aa	Known RBP	5.21	□□□□□ -1.57
TUP1	YCR084C	ECM2	P38241	364 aa	Known RBP	5.21	□□□□□ -1.57
TUP1	YCR084C	SIP3	P38717	1229 aa		5.21	□□□□□ -1.57
TUP1	YCR084C	TDA11	P38854	504 aa		5.21	□□□□□ -1.57
TUP1	YCR084C	XDJ1	P39102	459 aa		5.21	□□□□□ -1.57
TUP1	YCR084C	YJL068C	P40363	299 aa		5.21	□□□□□ -1.57
TUP1	YCR084C	MPS2	P53159	387 aa		5.21	□□□□□ -1.57
TUP1	YCR084C	ERP6	P53198	216 aa		5.21	□□□□□ -1.57
TUP1	YCR084C	SAM50	P53969	484 aa		5.21	□□□□□ -1.57
TUP1	YCR084C	ECM18	Q04623	453 aa		5.21	□□□□□ -1.57
TUP1	YCR084C	SEC10	Q06245	871 aa		5.21	□□□□□ -1.57
TUP1	YCR084C	GAS4	Q08271	471 aa		5.21	□□□□□ -1.57
TUP1	YCR084C	TRE2	Q08693	809 aa		5.21	□□□□□ -1.57
TUP1	YCR084C	HIS3	P06633	220 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	MET3	P08536	511 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	HO	P09932	586 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	YPK2	P18961	677 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	YAP1	P19880	650 aa	Known RBP	5.21	□□□□□ -1.58
TUP1	YCR084C	DBP2	P24783	546 aa	Known RBP	5.21	□□□□□ -1.58
TUP1	YCR084C	SEC65	P29478	273 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	ERG3	P32353	365 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	SQT1	P35184	431 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	TPO5	P36029	618 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	SIF2	P38262	535 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	MCX1	P38323	520 aa	Predicted RBP	5.21	□□□□□ -1.58
TUP1	YCR084C	UBX7	P38349	436 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	QDR1	P40475	563 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	URB2	P47108	1174 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	FAA4	P47912	694 aa	Known RBP	5.21	□□□□□ -1.58
TUP1	YCR084C	NCS6	P53088	359 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	PBP1	P53297	722 aa	Known RBP	5.21	□□□□□ -1.58
TUP1	YCR084C	NAN1	Q02931	896 aa	Known RBP	5.21	□□□□□ -1.58
TUP1	YCR084C	TRS120	Q04183	1289 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	SPC24	Q04477	213 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	YLR001C	Q07895	862 aa		5.21	□□□□□ -1.58
TUP1	YCR084C	RPS9A	O13516	197 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	COQ4	O13525	335 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	TRP3	P00937	484 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	CDC9	P04819	755 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	RPS9B	P05755	195 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	PRP4	P20053	465 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	MSB1	P21339	1137 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	MGM1	P32266	881 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	PAH1	P32567	862 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	SUR1	P33300	382 aa		5.2	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms