RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	TAF4	P50105	388 aa		4.95	□□□□□ -1.62
SHE1	YBL031W	PHO23	P50947	330 aa		4.95	□□□□□ -1.62
SHE1	YBL031W	SPO1	P53541	631 aa		4.95	□□□□□ -1.62
SHE1	YBL031W	CTF4	Q01454	927 aa		4.95	□□□□□ -1.62
SHE1	YBL031W	OMS1	Q06668	471 aa		4.95	□□□□□ -1.62
SHE1	YBL031W	NGL1	Q08213	363 aa	Known RBP	4.95	□□□□□ -1.62
SHE1	YBL031W	DIA2	Q08496	732 aa	Predicted RBP	4.95	□□□□□ -1.62
SHE1	YBL031W	NTO1	Q12311	748 aa		4.95	□□□□□ -1.62
SHE1	YBL031W	LAS17	Q12446	633 aa		4.95	□□□□□ -1.62
SHE1	YBL031W	VPS5	Q92331	675 aa		4.95	□□□□□ -1.62
SHE1	YBL031W	SIR4	P11978	1358 aa		4.94	□□□□□ -1.62
SHE1	YBL031W	PGI1	P12709	554 aa	Known RBP	4.94	□□□□□ -1.62
SHE1	YBL031W	CAF20	P12962	161 aa	Known RBP	4.94	□□□□□ -1.62
SHE1	YBL031W	CLC1	P17891	233 aa		4.94	□□□□□ -1.62
SHE1	YBL031W	HOP1	P20050	605 aa		4.94	□□□□□ -1.62
SHE1	YBL031W	SUI2	P20459	304 aa	Known RBP	4.94	□□□□□ -1.62
SHE1	YBL031W	PHO3	P24031	467 aa		4.94	□□□□□ -1.62
SHE1	YBL031W	SDS22	P36047	338 aa		4.94	□□□□□ -1.62
SHE1	YBL031W	PMC1	P38929	1173 aa	Predicted RBP	4.94	□□□□□ -1.62
SHE1	YBL031W	CCT3	P39077	534 aa	Known RBP	4.94	□□□□□ -1.62
SHE1	YBL031W	STL1	P39932	569 aa		4.94	□□□□□ -1.62
SHE1	YBL031W	ELO3	P40319	345 aa		4.94	□□□□□ -1.62
SHE1	YBL031W	BAP3	P41815	604 aa		4.94	□□□□□ -1.62
SHE1	YBL031W	BIT61	P47041	543 aa		4.94	□□□□□ -1.62
SHE1	YBL031W	NOP9	P47077	666 aa	Known RBP	4.94	□□□□□ -1.62
SHE1	YBL031W	MPP10	P47083	593 aa	Known RBP	4.94	□□□□□ -1.62
SHE1	YBL031W	MAK10	Q02197	733 aa		4.94	□□□□□ -1.62
SHE1	YBL031W	RCR2	Q03446	210 aa	Known RBP	4.94	□□□□□ -1.62
SHE1	YBL031W	CWC2	Q12046	339 aa	Predicted RBP	4.94	□□□□□ -1.62
SHE1	YBL031W	HRP1	Q99383	534 aa	Known RBP	4.94	□□□□□ -1.62
SHE1	YBL031W	PMA1	P05030	918 aa	Known RBP	4.93	□□□□□ -1.62
SHE1	YBL031W	PIF1	P07271	859 aa		4.93	□□□□□ -1.62
SHE1	YBL031W	IME2	P32581	645 aa		4.93	□□□□□ -1.62
SHE1	YBL031W	PTH2	P34222	208 aa		4.93	□□□□□ -1.62
SHE1	YBL031W	BUD8	P41698	603 aa		4.93	□□□□□ -1.62
SHE1	YBL031W	PUS4	P48567	403 aa	Known RBP	4.93	□□□□□ -1.62
SHE1	YBL031W	RIA1	P53893	1110 aa		4.93	□□□□□ -1.62
SHE1	YBL031W	ATG16	Q03818	150 aa		4.93	□□□□□ -1.62
SHE1	YBL031W	VPS36	Q06696	566 aa		4.93	□□□□□ -1.62
SHE1	YBL031W	CLF1	Q12309	687 aa	Predicted RBP	4.93	□□□□□ -1.62
SHE1	YBL031W	POM34	Q12445	299 aa		4.93	□□□□□ -1.62
SHE1	YBL031W	ECM3	Q99252	613 aa		4.93	□□□□□ -1.62
SHE1	YBL031W	RPO41	P13433	1351 aa	Known RBP	4.92	□□□□□ -1.62
SHE1	YBL031W	RPS9B	P05755	195 aa	Known RBP	4.92	□□□□□ -1.62
SHE1	YBL031W	YEL076C-A	P0CX16	216 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	YLR464W	P0CX17	216 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	SEC15	P22224	910 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	PEX1	P24004	1043 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	PMI40	P29952	429 aa	Known RBP	4.92	□□□□□ -1.62
SHE1	YBL031W	FUI1	P38196	639 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	YBR053C	P38235	358 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	YEL076C	P39971	216 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	GET2	P40056	285 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	YNL195C	P40168	261 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	YIL092W	P40497	633 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	ASK10	P48361	1146 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	BUL1	P48524	976 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	MUP1	P50276	574 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	THI22	Q06490	572 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	NUR1	Q12066	484 aa		4.92	□□□□□ -1.62
SHE1	YBL031W	EFT1	P32324	842 aa	Known RBP	4.91	□□□□□ -1.62
SHE1	YBL031W	YHR033W	P38690	423 aa		4.91	□□□□□ -1.62
SHE1	YBL031W	LYS9	P38999	446 aa		4.91	□□□□□ -1.62
SHE1	YBL031W	NUP60	P39705	539 aa		4.91	□□□□□ -1.62
SHE1	YBL031W	EAF5	P39995	279 aa		4.91	□□□□□ -1.62
SHE1	YBL031W	HOS4	P40480	1083 aa		4.91	□□□□□ -1.62
SHE1	YBL031W	MTL1	P53214	551 aa		4.91	□□□□□ -1.62
SHE1	YBL031W	YNL050C	P53952	270 aa		4.91	□□□□□ -1.62
SHE1	YBL031W	SUB1	P54000	292 aa	Known RBP	4.91	□□□□□ -1.62
SHE1	YBL031W	HLR1	Q04429	423 aa		4.91	□□□□□ -1.62
SHE1	YBL031W	ARP7	Q12406	477 aa		4.91	□□□□□ -1.62
SHE1	YBL031W	PHO81	P17442	1178 aa		4.9	□□□□□ -1.63
SHE1	YBL031W	ERG6	P25087	383 aa	Known RBP	4.9	□□□□□ -1.63
SHE1	YBL031W	PRE4	P30657	266 aa		4.9	□□□□□ -1.63
SHE1	YBL031W	FMO1	P38866	432 aa		4.9	□□□□□ -1.63
SHE1	YBL031W	IES5	P40060	125 aa		4.9	□□□□□ -1.63
SHE1	YBL031W	PRM2	P40534	656 aa		4.9	□□□□□ -1.63
SHE1	YBL031W	HIS6	P40545	261 aa		4.9	□□□□□ -1.63
SHE1	YBL031W	QRI7	P43122	407 aa		4.9	□□□□□ -1.63
SHE1	YBL031W	PEF1	P53238	335 aa		4.9	□□□□□ -1.63
SHE1	YBL031W	LSP1	Q12230	341 aa	Known RBP	4.9	□□□□□ -1.63
SHE1	YBL031W	YOL114C	Q12322	202 aa		4.9	□□□□□ -1.63
SHE1	YBL031W	TUF1	P02992	437 aa	Known RBP	4.89	□□□□□ -1.63
SHE1	YBL031W	PET309	P32522	965 aa	Predicted RBP	4.89	□□□□□ -1.63
SHE1	YBL031W	MRS6	P32864	603 aa	Known RBP	4.89	□□□□□ -1.63
SHE1	YBL031W	TGL1	P34163	548 aa		4.89	□□□□□ -1.63
SHE1	YBL031W	CAB3	P36076	571 aa		4.89	□□□□□ -1.63
SHE1	YBL031W	OPY1	P38271	328 aa		4.89	□□□□□ -1.63
SHE1	YBL031W	YHL041W	P38730	149 aa		4.89	□□□□□ -1.63
SHE1	YBL031W	BCD1	P38772	366 aa		4.89	□□□□□ -1.63
SHE1	YBL031W	PIG2	P40187	538 aa		4.89	□□□□□ -1.63
SHE1	YBL031W	MNT2	P53059	558 aa		4.89	□□□□□ -1.63
SHE1	YBL031W	RRP46	P53256	223 aa	Predicted RBP	4.89	□□□□□ -1.63
SHE1	YBL031W	SQS1	P53866	767 aa	Known RBP	4.89	□□□□□ -1.63
SHE1	YBL031W	CEG1	Q01159	459 aa	Predicted RBP	4.89	□□□□□ -1.63
SHE1	YBL031W	AIM39	Q08223	395 aa		4.89	□□□□□ -1.63
SHE1	YBL031W	NUP192	P47054	1683 aa		4.89	□□□□□ -1.63
SHE1	YBL031W	EDE1	P34216	1381 aa		4.89	□□□□□ -1.63
SHE1	YBL031W	MSS18	P08593	268 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	HMG2	P12684	1045 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms