RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 CLIC6Q96NY7 704 aa16.17■□□□□ 0.18
SPIN3-239ENST00000640463 TOGARAM1Q9Y4F4 1720 aa16.17■□□□□ 0.18
SPIN3-239ENST00000640463 A0A0U1RQG5 324 aaPredicted RBP16.17■□□□□ 0.18
SPIN3-239ENST00000640463 SH2B2O14492 632 aaPredicted RBP16.17■□□□□ 0.18
SPIN3-239ENST00000640463 CTSWP56202 376 aa16.17■□□□□ 0.18
SPIN3-239ENST00000640463 NFXL1Q6ZNB6 911 aa16.17■□□□□ 0.18
SPIN3-239ENST00000640463 TBC1D2BQ9UPU7 963 aa16.17■□□□□ 0.18
SPIN3-239ENST00000640463 PDE6AP16499 860 aa16.17■□□□□ 0.18
SPIN3-239ENST00000640463 PTPN21Q16825 1174 aa16.17■□□□□ 0.18
SPIN3-239ENST00000640463 APOA5Q6Q788 366 aa16.17■□□□□ 0.18
SPIN3-239ENST00000640463 CCAR2Q8N163 923 aaKnown RBP16.17■□□□□ 0.18
SPIN3-239ENST00000640463 ZMYM6O95789 1325 aa16.16■□□□□ 0.18
SPIN3-239ENST00000640463 C4AP0C0L4 1744 aa16.16■□□□□ 0.18
SPIN3-239ENST00000640463 C4BP0C0L5 1744 aa16.16■□□□□ 0.18
SPIN3-239ENST00000640463 CMA1P23946 247 aa16.16■□□□□ 0.18
SPIN3-239ENST00000640463 NLRP12P59046 1061 aa16.16■□□□□ 0.18
SPIN3-239ENST00000640463 CTDSPL2Q05D32 466 aa16.16■□□□□ 0.18
SPIN3-239ENST00000640463 SMAP1Q8IYB5 467 aaPredicted RBP16.16■□□□□ 0.18
SPIN3-239ENST00000640463 VGLL2Q8N8G2 317 aa16.16■□□□□ 0.18
SPIN3-239ENST00000640463 SLC4A9Q96Q91 983 aa16.16■□□□□ 0.18
SPIN3-239ENST00000640463 ATP1A3P13637 1013 aa16.16■□□□□ 0.18
SPIN3-239ENST00000640463 SLC39A14Q15043 492 aa16.16■□□□□ 0.18
SPIN3-239ENST00000640463 NYAP1Q6ZVC0 841 aa16.16■□□□□ 0.18
SPIN3-239ENST00000640463 ZBTB1Q9Y2K1 713 aa16.16■□□□□ 0.18
SPIN3-239ENST00000640463 PDE8BO95263 885 aa16.15■□□□□ 0.18
SPIN3-239ENST00000640463 SYKP43405 635 aa16.15■□□□□ 0.18
SPIN3-239ENST00000640463 NCAPHQ15003 741 aa16.15■□□□□ 0.18
SPIN3-239ENST00000640463 ARMCX5Q6P1M9 558 aa16.15■□□□□ 0.18
SPIN3-239ENST00000640463 PNOCQ13519 176 aa16.15■□□□□ 0.18
SPIN3-239ENST00000640463 SHC4Q6S5L8 630 aa16.15■□□□□ 0.18
SPIN3-239ENST00000640463 AIDAQ96BJ3 306 aa16.15■□□□□ 0.18
SPIN3-239ENST00000640463 RANBP6O60518 1105 aaKnown RBP16.14■□□□□ 0.18
SPIN3-239ENST00000640463 SPECC1Q5M775 1068 aa16.14■□□□□ 0.18
SPIN3-239ENST00000640463 ZBTB43O43298 467 aa16.14■□□□□ 0.17
SPIN3-239ENST00000640463 ZNF215Q9UL58 517 aaPredicted RBP16.14■□□□□ 0.17
SPIN3-239ENST00000640463 TACC3Q9Y6A5 838 aa16.14■□□□□ 0.17
SPIN3-239ENST00000640463 DDX60Q8IY21 1712 aaKnown RBP16.14■□□□□ 0.17
SPIN3-239ENST00000640463 TTF1Q15361 905 aaPredicted RBP16.14■□□□□ 0.17
SPIN3-239ENST00000640463 TMEM67Q5HYA8 995 aa16.14■□□□□ 0.17
SPIN3-239ENST00000640463 CCDC82Q8N4S0 544 aa16.14■□□□□ 0.17
SPIN3-239ENST00000640463 IGDCC4Q8TDY8 1250 aa16.14■□□□□ 0.17
SPIN3-239ENST00000640463 STRBPQ96SI9 672 aaKnown RBP16.14■□□□□ 0.17
SPIN3-239ENST00000640463 ZKSCAN3Q9BRR0 538 aa16.14■□□□□ 0.17
SPIN3-239ENST00000640463 TEX13AQ9BXU3 409 aaPredicted RBP16.14■□□□□ 0.17
SPIN3-239ENST00000640463 OSBPL5Q9H0X9 879 aaPredicted RBP16.14■□□□□ 0.17
SPIN3-239ENST00000640463 GOLGA8AA7E2F4 631 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 IARSP41252 1262 aaKnown RBP16.13■□□□□ 0.17
SPIN3-239ENST00000640463 UBE3CQ15386 1083 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 MAGEB6Q8N7X4 407 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 SLC26A6Q9BXS9 759 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 LY9Q9HBG7 655 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 EPB41L4AQ9HCS5 686 aaPredicted RBP16.13■□□□□ 0.17
SPIN3-239ENST00000640463 FAM217BQ9NTX9 383 aaPredicted RBP16.13■□□□□ 0.17
SPIN3-239ENST00000640463 SLAIN2Q9P270 581 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 CDHR2Q9BYE9 1310 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 TCRBV5S4A2TA0A5A2 114 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 GSDMDP57764 484 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 PTPAQ15257 358 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 RRP12Q5JTH9 1297 aaKnown RBP16.13■□□□□ 0.17
SPIN3-239ENST00000640463 E4F1Q66K89 784 aaPredicted RBP16.13■□□□□ 0.17
SPIN3-239ENST00000640463 BPIFA3Q9BQP9 254 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 ARMT1Q9H993 441 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 ZSWIM5Q9P217 1185 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 WDR19Q8NEZ3 1342 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 ABCC12Q96J65 1359 aa16.13■□□□□ 0.17
SPIN3-239ENST00000640463 SOS2Q07890 1332 aaPredicted RBP16.12■□□□□ 0.17
SPIN3-239ENST00000640463 NPHP1O15259 732 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 PRKAB2O43741 272 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 FANCCQ00597 558 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 NTRK3Q16288 839 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 CMTR1Q8N1G2 835 aaKnown RBP16.12■□□□□ 0.17
SPIN3-239ENST00000640463 DPF2Q92785 391 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 TOMM22Q9NS69 142 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 PRDM4Q9UKN5 801 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 UBN2Q6ZU65 1347 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 MBD4O95243 580 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 ZSCAN20P17040 1043 aaPredicted RBP16.12■□□□□ 0.17
SPIN3-239ENST00000640463 GUCY1A2P33402 732 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 HSP90AA4PQ58FG1 418 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 CPLX2Q6PUV4 134 aaKnown RBP16.12■□□□□ 0.17
SPIN3-239ENST00000640463 HSD3B7Q9H2F3 369 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 IFIT3O14879 490 aaKnown RBP16.12■□□□□ 0.17
SPIN3-239ENST00000640463 CDKL5O76039 1030 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 GOLGA8FQ08AF8 430 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 GOLGA8DPQ0D2H9 430 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 MAP3K14Q99558 947 aa16.12■□□□□ 0.17
SPIN3-239ENST00000640463 FOXN1O15353 648 aa16.11■□□□□ 0.17
SPIN3-239ENST00000640463 CYP19A1P11511 503 aaPredicted RBP16.11■□□□□ 0.17
SPIN3-239ENST00000640463 SFPQP23246 707 aaKnown RBP eCLIP16.11■□□□□ 0.17
SPIN3-239ENST00000640463 IFNL3Q8IZI9 196 aa16.11■□□□□ 0.17
SPIN3-239ENST00000640463 NAPBQ9H115 298 aa16.11■□□□□ 0.17
SPIN3-239ENST00000640463 A0A0G2JS52 829 aa16.11■□□□□ 0.17
SPIN3-239ENST00000640463 PDE8AO60658 829 aa16.11■□□□□ 0.17
SPIN3-239ENST00000640463 IGSF3O75054 1194 aa16.11■□□□□ 0.17
SPIN3-239ENST00000640463 TPM4P67936 248 aa16.11■□□□□ 0.17
SPIN3-239ENST00000640463 TRIM29Q14134 588 aa16.11■□□□□ 0.17
SPIN3-239ENST00000640463 LONRF3Q496Y0 759 aa16.11■□□□□ 0.17
SPIN3-239ENST00000640463 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.11■□□□□ 0.17
SPIN3-239ENST00000640463 IMPACTQ9P2X3 320 aa16.11■□□□□ 0.17
SPIN3-239ENST00000640463 KCNJ14Q9UNX9 436 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms