RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 SPON2Q9BUD6 331 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 GINM1Q9NU53 330 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 SPATA31A1Q5TZJ5 1347 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 CCER2I3L3R5 266 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 ATMINO43313 823 aaPredicted RBP9.63□□□□□ -0.87
SCARB2-209ENST00000638409 RNF40O75150 1001 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 RXRBP28702 533 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 ARSHQ5FYA8 562 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 PPP4R4Q6NUP7 873 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 ERMP1Q7Z2K6 904 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 CSRNP1Q96S65 589 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 ST7Q9NRC1 585 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 TTF1Q15361 905 aaPredicted RBP9.63□□□□□ -0.87
SCARB2-209ENST00000638409 RNF20Q5VTR2 975 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 ZBTB33Q86T24 672 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 HOMER1Q86YM7 354 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 CARD10Q9BWT7 1032 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 ARNT2Q9HBZ2 717 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 CNGA1P29973 690 aa9.62□□□□□ -0.87
SCARB2-209ENST00000638409 C3orf67Q6ZVT6 689 aa9.62□□□□□ -0.87
SCARB2-209ENST00000638409 ANKRD24Q8TF21 1146 aa9.62□□□□□ -0.87
SCARB2-209ENST00000638409 SEC16BQ96JE7 1060 aa9.62□□□□□ -0.87
SCARB2-209ENST00000638409 BCL2L12Q9HB09 334 aa9.62□□□□□ -0.87
SCARB2-209ENST00000638409 PCDHB11Q9Y5F2 797 aa9.62□□□□□ -0.87
SCARB2-209ENST00000638409 MAGEB6P1A0A0J9YX57 407 aa9.62□□□□□ -0.87
SCARB2-209ENST00000638409 FEZ1Q99689 392 aa9.62□□□□□ -0.87
SCARB2-209ENST00000638409 STRN4Q9NRL3 753 aa9.62□□□□□ -0.87
SCARB2-209ENST00000638409 TMEM260Q9NX78 707 aa9.62□□□□□ -0.87
SCARB2-209ENST00000638409 KIAA1468Q9P260 1216 aa9.62□□□□□ -0.87
SCARB2-209ENST00000638409 SPG7Q9UQ90 795 aa9.62□□□□□ -0.87
SCARB2-209ENST00000638409 THSD7AQ9UPZ6 1657 aa9.61□□□□□ -0.87
SCARB2-209ENST00000638409 WNK3Q9BYP7 1800 aa9.61□□□□□ -0.87
SCARB2-209ENST00000638409 TMEM229AB2RXF0 380 aa9.61□□□□□ -0.87
SCARB2-209ENST00000638409 SCGB1D2O95969 90 aa9.61□□□□□ -0.87
SCARB2-209ENST00000638409 TNNT2P45379 298 aaPredicted RBP9.61□□□□□ -0.87
SCARB2-209ENST00000638409 TAF1CQ15572 869 aaPredicted RBP9.61□□□□□ -0.87
SCARB2-209ENST00000638409 ARSIQ5FYB1 569 aa9.61□□□□□ -0.87
SCARB2-209ENST00000638409 ALKBH2Q6NS38 261 aa9.61□□□□□ -0.87
SCARB2-209ENST00000638409 USB1Q9BQ65 265 aaKnown RBP9.61□□□□□ -0.87
SCARB2-209ENST00000638409 ADAMTS1Q9UHI8 967 aa9.61□□□□□ -0.87
SCARB2-209ENST00000638409 NCAPD2Q15021 1401 aa9.61□□□□□ -0.87
SCARB2-209ENST00000638409 FBF1Q8TES7 1133 aa9.61□□□□□ -0.87
SCARB2-209ENST00000638409 INTUQ9ULD6 942 aa9.61□□□□□ -0.87
SCARB2-209ENST00000638409 BPNT1O95861 308 aa9.6□□□□□ -0.87
SCARB2-209ENST00000638409 TCP11L2Q8N4U5 519 aa9.6□□□□□ -0.87
SCARB2-209ENST00000638409 CD2APQ9Y5K6 639 aa9.6□□□□□ -0.87
SCARB2-209ENST00000638409 SHTN1A0MZ66 631 aa9.6□□□□□ -0.87
SCARB2-209ENST00000638409 KRT18P05783 430 aaKnown RBP9.6□□□□□ -0.87
SCARB2-209ENST00000638409 PPP2R1AP30153 589 aa9.6□□□□□ -0.87
SCARB2-209ENST00000638409 SLC4A3P48751 1232 aa9.6□□□□□ -0.87
SCARB2-209ENST00000638409 MTHFSP49914 203 aa9.6□□□□□ -0.87
SCARB2-209ENST00000638409 BRD3Q15059 726 aa9.6□□□□□ -0.87
SCARB2-209ENST00000638409 PPP2R5AQ15172 486 aa9.6□□□□□ -0.87
SCARB2-209ENST00000638409 AXDND1Q5T1B0 1012 aaPredicted RBP9.6□□□□□ -0.87
SCARB2-209ENST00000638409 TOM1L2Q6ZVM7 507 aa9.6□□□□□ -0.87
SCARB2-209ENST00000638409 C16orf86Q6ZW13 317 aa9.6□□□□□ -0.87
SCARB2-209ENST00000638409 UBR7Q8N806 425 aa9.6□□□□□ -0.87
SCARB2-209ENST00000638409 PARP4Q9UKK3 1724 aaKnown RBP9.6□□□□□ -0.87
SCARB2-209ENST00000638409 M0R2N6 131 aa9.59□□□□□ -0.87
SCARB2-209ENST00000638409 PTPREP23469 700 aa9.59□□□□□ -0.87
SCARB2-209ENST00000638409 SCTRP47872 440 aa9.59□□□□□ -0.87
SCARB2-209ENST00000638409 USP4Q13107 963 aa9.59□□□□□ -0.87
SCARB2-209ENST00000638409 TRPM4Q8TD43 1214 aa9.59□□□□□ -0.87
SCARB2-209ENST00000638409 EPS8L3Q8TE67 593 aaKnown RBP9.59□□□□□ -0.87
SCARB2-209ENST00000638409 COL3A1P02461 1466 aaPredicted RBP9.59□□□□□ -0.87
SCARB2-209ENST00000638409 DISP2A7MBM2 1401 aa9.59□□□□□ -0.87
SCARB2-209ENST00000638409 RGPD2P0DJD1 1756 aa9.59□□□□□ -0.87
SCARB2-209ENST00000638409 RGPD1P0DJD0 1748 aa9.59□□□□□ -0.87
SCARB2-209ENST00000638409 PLIN1O60240 522 aa9.59□□□□□ -0.87
SCARB2-209ENST00000638409 PLEKHG2Q9H7P9 1386 aa9.59□□□□□ -0.87
SCARB2-209ENST00000638409 PTPRNQ16849 979 aa9.58□□□□□ -0.88
SCARB2-209ENST00000638409 DDX42Q86XP3 938 aaKnown RBP eCLIP9.58□□□□□ -0.88
SCARB2-209ENST00000638409 KIAA0825Q8IV33 1275 aa9.58□□□□□ -0.88
SCARB2-209ENST00000638409 EDEM1Q92611 657 aa9.58□□□□□ -0.88
SCARB2-209ENST00000638409 RGS12O14924 1447 aa9.58□□□□□ -0.88
SCARB2-209ENST00000638409 IFRD1O00458 451 aaPredicted RBP9.58□□□□□ -0.88
SCARB2-209ENST00000638409 EIF4A2Q14240 407 aaKnown RBP9.58□□□□□ -0.88
SCARB2-209ENST00000638409 USPL1Q5W0Q7 1092 aa9.58□□□□□ -0.88
SCARB2-209ENST00000638409 CCDC81Q6ZN84 652 aa9.58□□□□□ -0.88
SCARB2-209ENST00000638409 PODNQ7Z5L7 613 aa9.58□□□□□ -0.88
SCARB2-209ENST00000638409 FOSP01100 380 aaPredicted RBP9.58□□□□□ -0.88
SCARB2-209ENST00000638409 IL13P35225 146 aa9.58□□□□□ -0.88
SCARB2-209ENST00000638409 NOS2P35228 1153 aa9.58□□□□□ -0.88
SCARB2-209ENST00000638409 AMOTL1Q8IY63 956 aa9.58□□□□□ -0.88
SCARB2-209ENST00000638409 TRIM56Q9BRZ2 755 aaKnown RBP9.58□□□□□ -0.88
SCARB2-209ENST00000638409 PRKRIP1Q9H875 184 aaPredicted RBP9.58□□□□□ -0.88
SCARB2-209ENST00000638409 AVENQ9NQS1 362 aaPredicted RBP9.58□□□□□ -0.88
SCARB2-209ENST00000638409 SLC39A7Q92504 469 aa9.57□□□□□ -0.88
SCARB2-209ENST00000638409 EAF1Q96JC9 268 aaPredicted RBP9.57□□□□□ -0.88
SCARB2-209ENST00000638409 ENAMQ9NRM1 1142 aa9.57□□□□□ -0.88
SCARB2-209ENST00000638409 NRBP1Q9UHY1 535 aa9.57□□□□□ -0.88
SCARB2-209ENST00000638409 MINDY4BA8MYZ0 360 aa9.57□□□□□ -0.88
SCARB2-209ENST00000638409 CAND2O75155 1236 aa9.57□□□□□ -0.88
SCARB2-209ENST00000638409 RAB15P59190 212 aa9.57□□□□□ -0.88
SCARB2-209ENST00000638409 SEPT6Q14141 434 aa9.57□□□□□ -0.88
SCARB2-209ENST00000638409 FAM98CQ17RN3 349 aaKnown RBP9.57□□□□□ -0.88
SCARB2-209ENST00000638409 ETFBKMTQ8IXQ9 262 aa9.57□□□□□ -0.88
SCARB2-209ENST00000638409 FAM169BQ8N8A8 192 aa9.57□□□□□ -0.88
SCARB2-209ENST00000638409 LTV1Q96GA3 475 aaPredicted RBP9.57□□□□□ -0.88
SCARB2-209ENST00000638409 LHX6Q9UPM6 363 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms