RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 SLC5A1P13866 664 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 CASQ1P31415 396 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 ROR1Q01973 937 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 MTMR2Q13614 643 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 LAMC2Q13753 1193 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 PDE1CQ14123 709 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-213ENST00000630925 KRT72Q14CN4 511 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 C21orf62-AS1Q17RA5 79 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 TRIM50Q86XT4 487 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 SULF1Q8IWU6 871 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 ZNF713Q8N859 430 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-213ENST00000630925 IL17REQ8NFR9 667 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 COL26A1Q96A83 441 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 CENPTQ96BT3 561 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 HOOK2Q96ED9 719 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 RBM33Q96EV2 1170 aaKnown RBP5.79□□□□□ -1.48
SDCBP-213ENST00000630925 CAMKK2Q96RR4 588 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 ELAC2Q9BQ52 826 aaKnown RBP5.79□□□□□ -1.48
SDCBP-213ENST00000630925 FAM167BQ9BTA0 163 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 CNNM2Q9H8M5 875 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 STRN4Q9NRL3 753 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 ATG3Q9NT62 314 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 PRKAG3Q9UGI9 489 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 PRG4Q92954 1404 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-213ENST00000630925 VSTM5A8MXK1 200 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 MYCLP1P12525 358 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-213ENST00000630925 ZNF280AP59817 542 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-213ENST00000630925 IFRD2Q12894 506 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-213ENST00000630925 MTMR1Q13613 665 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 RASGRF1Q13972 1273 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 AFAP1L2Q8N4X5 818 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 UBR7Q8N806 425 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 MFSD3Q96ES6 412 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 MAP3K14Q99558 947 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 SMYD2Q9NRG4 433 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 PRDM4Q9UKN5 801 aa5.79□□□□□ -1.48
SDCBP-213ENST00000630925 DDX11L8A8MPP1 907 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 IPO8O15397 1037 aaKnown RBP5.78□□□□□ -1.48
SDCBP-213ENST00000630925 PER1O15534 1290 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-213ENST00000630925 STT3AP46977 705 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 GUCA2AQ02747 115 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 BIRC3Q13489 604 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 CCDC158Q5M9N0 1113 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 CCDC73Q6ZRK6 1079 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 SYNPOQ8N3V7 929 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 THAP3Q8WTV1 239 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-213ENST00000630925 ZFPM2Q8WW38 1151 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 SH3KBP1Q96B97 665 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 NIF3L1Q9GZT8 377 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 STRIP2Q9ULQ0 834 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 EFR3BQ9Y2G0 817 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 PTCH2Q9Y6C5 1203 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 E2F8A0AVK6 867 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 ANO9A1A5B4 782 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 IPO5O00410 1097 aaKnown RBP5.78□□□□□ -1.48
SDCBP-213ENST00000630925 PDPK1O15530 556 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 RFPL1O75677 317 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 TPM2P07951 284 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 U2AF1L5P0DN76 240 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-213ENST00000630925 GTF2A2P52657 109 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 BPIFB3P59826 476 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 U2AF1Q01081 240 aaKnown RBP eCLIP5.78□□□□□ -1.48
SDCBP-213ENST00000630925 DDB1Q16531 1140 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 MEI1Q5TIA1 1274 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 IGF2-ASQ6U949 168 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 NKAPQ8N5F7 415 aaKnown RBP5.78□□□□□ -1.48
SDCBP-213ENST00000630925 PI4K2BQ8TCG2 481 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.78□□□□□ -1.48
SDCBP-213ENST00000630925 TBC1D31Q96DN5 1066 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 SMAD5Q99717 465 aaKnown RBP5.78□□□□□ -1.48
SDCBP-213ENST00000630925 SLX1AQ9BQ83 275 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 C22orf23Q9BZE7 217 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 GINM1Q9NU53 330 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 XPO7Q9UIA9 1087 aaKnown RBP5.78□□□□□ -1.48
SDCBP-213ENST00000630925 FBXO10Q9UK96 956 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 CEP131Q9UPN4 1083 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 MAP3K4Q9Y6R4 1608 aa5.78□□□□□ -1.48
SDCBP-213ENST00000630925 FAM170AA1A519 330 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 RCCD1A6NED2 376 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 APAF1O14727 1248 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 RAC2P15153 192 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 TNNT2P45379 298 aaPredicted RBP5.77□□□□□ -1.49
SDCBP-213ENST00000630925 SOX9P48436 509 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 CASP7P55210 303 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 CHAF1AQ13111 956 aaPredicted RBP5.77□□□□□ -1.49
SDCBP-213ENST00000630925 AKAP4Q5JQC9 854 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 ANKRD45Q5TZF3 282 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 PLBD1Q6P4A8 553 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 EEPD1Q7L9B9 569 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 ARHGEF25Q86VW2 580 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 NKX2-3Q8TAU0 364 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 HLA-CQ95604 372 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 GJA10Q969M2 543 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 CDK5RAP3Q96JB5 506 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 SPAG5Q96R06 1193 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 IWS1Q96ST2 819 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 RHOBTB2Q9BYZ6 727 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 PCDHGB3Q9Y5G1 929 aa5.77□□□□□ -1.49
SDCBP-213ENST00000630925 ABLIM3O94929 683 aa5.76□□□□□ -1.49
SDCBP-213ENST00000630925 INMTO95050 263 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms