RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 NECTIN1Q15223 517 aa12.06□□□□□ -0.48
FOXCUT-201ENST00000628509 AOC3Q16853 763 aa12.06□□□□□ -0.48
FOXCUT-201ENST00000628509 CREB3L3Q68CJ9 461 aa12.06□□□□□ -0.48
FOXCUT-201ENST00000628509 RALYLQ86SE5 291 aaKnown RBP12.06□□□□□ -0.48
FOXCUT-201ENST00000628509 SNX21Q969T3 373 aa12.06□□□□□ -0.48
FOXCUT-201ENST00000628509 TEKT1Q969V4 418 aa12.06□□□□□ -0.48
FOXCUT-201ENST00000628509 STRBPQ96SI9 672 aaKnown RBP12.06□□□□□ -0.48
FOXCUT-201ENST00000628509 PUS7LQ9H0K6 701 aaKnown RBP12.06□□□□□ -0.48
FOXCUT-201ENST00000628509 CNNM2Q9H8M5 875 aa12.06□□□□□ -0.48
FOXCUT-201ENST00000628509 ZNRF3Q9ULT6 936 aa12.06□□□□□ -0.48
FOXCUT-201ENST00000628509 SLC4A4Q9Y6R1 1079 aa12.06□□□□□ -0.48
FOXCUT-201ENST00000628509 ARFGEF1Q9Y6D6 1849 aa12.06□□□□□ -0.48
FOXCUT-201ENST00000628509 BRCA1P38398 1863 aaKnown RBP12.06□□□□□ -0.48
FOXCUT-201ENST00000628509 PRDX5P30044 214 aa12.05□□□□□ -0.48
FOXCUT-201ENST00000628509 EIF6P56537 245 aaKnown RBP12.05□□□□□ -0.48
FOXCUT-201ENST00000628509 PPP4CP60510 307 aa12.05□□□□□ -0.48
FOXCUT-201ENST00000628509 DOK7Q18PE1 504 aa12.05□□□□□ -0.48
FOXCUT-201ENST00000628509 BLOC1S2Q6QNY1 142 aa12.05□□□□□ -0.48
FOXCUT-201ENST00000628509 HHIPL2Q6UWX4 724 aa12.05□□□□□ -0.48
FOXCUT-201ENST00000628509 ZNF589Q86UQ0 364 aaPredicted RBP12.05□□□□□ -0.48
FOXCUT-201ENST00000628509 KCNB2Q92953 911 aa12.05□□□□□ -0.48
FOXCUT-201ENST00000628509 DBNDD1Q9H9R9 158 aa12.05□□□□□ -0.48
FOXCUT-201ENST00000628509 MROH7-TTC4A0A0A0MT08 1334 aa12.05□□□□□ -0.48
FOXCUT-201ENST00000628509 M0R2C6 588 aa12.04□□□□□ -0.48
FOXCUT-201ENST00000628509 SLC27A2O14975 620 aa12.04□□□□□ -0.48
FOXCUT-201ENST00000628509 RPS12P25398 132 aaKnown RBP12.04□□□□□ -0.48
FOXCUT-201ENST00000628509 USP5P45974 858 aa12.04□□□□□ -0.48
FOXCUT-201ENST00000628509 FGD1P98174 961 aa12.04□□□□□ -0.48
FOXCUT-201ENST00000628509 PTH1RQ03431 593 aa12.04□□□□□ -0.48
FOXCUT-201ENST00000628509 ILDR2Q71H61 639 aa12.04□□□□□ -0.48
FOXCUT-201ENST00000628509 AGBL3Q8NEM8 1001 aa12.04□□□□□ -0.48
FOXCUT-201ENST00000628509 KRT23Q9C075 422 aa12.04□□□□□ -0.48
FOXCUT-201ENST00000628509 TMOD2Q9NZR1 351 aa12.04□□□□□ -0.48
FOXCUT-201ENST00000628509 ARPP21Q9UBL0 812 aaPredicted RBP12.04□□□□□ -0.48
FOXCUT-201ENST00000628509 TTF2Q9UNY4 1162 aaKnown RBP12.04□□□□□ -0.48
FOXCUT-201ENST00000628509 COL1A1P02452 1464 aaPredicted RBP12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 MYO1BO43795 1136 aa12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 NEK4P51957 841 aa12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 SART3Q15020 963 aaKnown RBP12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 CCDC129Q6ZRS4 1044 aa12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 IFNL3Q8IZI9 196 aa12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 NCOA7Q8NI08 942 aa12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 JAKMIP1Q96N16 626 aaKnown RBP12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 GPR101Q96P66 508 aaPredicted RBP12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 NEK1Q96PY6 1258 aa12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 SEC62Q99442 399 aaKnown RBP12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 FHDC1Q9C0D6 1143 aaPredicted RBP12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 ARMT1Q9H993 441 aa12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 SERPINA10Q9UK55 444 aa12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 SNX14Q9Y5W7 946 aa12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 SNED1Q8TER0 1413 aa12.03□□□□□ -0.48
FOXCUT-201ENST00000628509 FER1L6Q2WGJ9 1857 aa12.02□□□□□ -0.48
FOXCUT-201ENST00000628509 MYH2Q9UKX2 1941 aa12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 GPR75-ASB3A0A0A6YYF3 556 aa12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 WTIPA6NIX2 430 aaPredicted RBP12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 GABBR2O75899 941 aa12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 FGAP02671 866 aa12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 CASTP20810 708 aaKnown RBP12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 PDE4BQ07343 736 aa12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 VPS53Q5VIR6 699 aa12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 CIAPIN1Q6FI81 312 aa12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 OLFM4Q6UX06 510 aa12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 RUFY3Q7L099 469 aa12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 MIGA1Q8NAN2 632 aa12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 ZSCAN31Q96LW9 406 aaPredicted RBP12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 ZNF277Q9NRM2 450 aaPredicted RBP12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 AATFQ9NY61 560 aaKnown RBP eCLIP12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 GAKO14976 1311 aa12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 WDR19Q8NEZ3 1342 aa12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 MYO5AQ9Y4I1 1855 aaKnown RBP12.02□□□□□ -0.49
FOXCUT-201ENST00000628509 ERICH2A1L162 156 aa12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 K7ELQ4 463 aaPredicted RBP12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 GRIN3BO60391 1043 aa12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 PDIA4P13667 645 aaKnown RBP12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 LMNB1P20700 586 aa12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 BTDP43251 543 aa12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 RBM5P52756 815 aaKnown RBP eCLIP12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 CCDC178Q5BJE1 867 aa12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 DACT2Q5SW24 774 aa12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 RSBN1LQ6PCB5 846 aaPredicted RBP12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 MFSD6Q6ZSS7 791 aa12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 RIOK1Q9BRS2 568 aaKnown RBP12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 MTA3Q9BTC8 594 aa12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 ZSWIM6Q9HCJ5 1215 aa12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 PDRG1Q9NUG6 133 aa12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 PSME4Q14997 1843 aa12.01□□□□□ -0.49
FOXCUT-201ENST00000628509 CYP21A2P08686 494 aa12□□□□□ -0.49
FOXCUT-201ENST00000628509 VIL1P09327 827 aaKnown RBP12□□□□□ -0.49
FOXCUT-201ENST00000628509 MCM5P33992 734 aa12□□□□□ -0.49
FOXCUT-201ENST00000628509 SBK1Q52WX2 424 aa12□□□□□ -0.49
FOXCUT-201ENST00000628509 PPP4R3BQ5MIZ7 849 aa12□□□□□ -0.49
FOXCUT-201ENST00000628509 ARHGAP27Q6ZUM4 889 aa12□□□□□ -0.49
FOXCUT-201ENST00000628509 DHX32Q7L7V1 743 aaKnown RBP12□□□□□ -0.49
FOXCUT-201ENST00000628509 TTC6Q86TZ1 520 aa12□□□□□ -0.49
FOXCUT-201ENST00000628509 TEX11Q8IYF3 940 aa12□□□□□ -0.49
FOXCUT-201ENST00000628509 TMTC2Q8N394 836 aa12□□□□□ -0.49
FOXCUT-201ENST00000628509 LCORLQ8N3X6 602 aa12□□□□□ -0.49
FOXCUT-201ENST00000628509 ZDHHC15Q96MV8 337 aa12□□□□□ -0.49
FOXCUT-201ENST00000628509 SYT17Q9BSW7 474 aa12□□□□□ -0.49
FOXCUT-201ENST00000628509 IL25Q9H293 177 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms