RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ZSCAN16Q9H4T2 348 aaPredicted RBP9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 SPTLC3Q9NUV7 552 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 SPDYE4A6NLX3 237 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 PPM1FP49593 454 aaPredicted RBP9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 ZNF75DP51815 510 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 RESTQ13127 1097 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 DHX32Q7L7V1 743 aaKnown RBP9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 CNBD1Q8NA66 436 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 KBTBD3Q8NAB2 608 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 HAUS7Q99871 368 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 PDE4BQ07343 736 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 STOX1Q6ZVD7 989 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 SMARCC1Q92922 1105 aaPredicted RBP9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 PLIN2Q99541 437 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 TMEM94Q12767 1356 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 ZNF609O15014 1411 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 PDCL2Q8N4E4 241 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 MAGEB6Q8N7X4 407 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 BIN2Q9UBW5 565 aaPredicted RBP9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 COL15A1P39059 1388 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 A0A0G2JLW4 131 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 CCDC196A0A1B0GTZ2 297 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 HEATR3Q7Z4Q2 680 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 FSIP1Q8NA03 581 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 DCAF5Q96JK2 942 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 BCS1LQ9Y276 419 aa9.49□□□□□ -0.89
PTPDC1-204ENST00000620992 HEG1Q9ULI3 1381 aa9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 FAM170AA1A519 330 aa9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 ANKRD62A6NC57 917 aa9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 HMGB1P09429 215 aaKnown RBP9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 MARCKSP29966 332 aaPredicted RBP9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 RFX5P48382 616 aaPredicted RBP9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 METAP2P50579 478 aaKnown RBP eCLIP9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 OTUD7BQ6GQQ9 843 aa9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 UFL1O94874 794 aa9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 UBA7P41226 1012 aa9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 SSRP1Q08945 709 aaKnown RBP9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 CUL5Q93034 780 aa9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 USP28Q96RU2 1077 aa9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 CCDC94Q9BW85 323 aaPredicted RBP9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 CRNKL1Q9BZJ0 848 aaKnown RBP9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 RNF41Q9H4P4 317 aaPredicted RBP9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 KDM3BQ7LBC6 1761 aa9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 MED1Q15648 1581 aaPredicted RBP9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 TSGA10IPQ3SY00 556 aa9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 USPL1Q5W0Q7 1092 aa9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 TTLL7Q6ZT98 887 aa9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 NSUN7Q8NE18 718 aaKnown RBP9.48□□□□□ -0.89
PTPDC1-204ENST00000620992 AFMP43652 599 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 LRRC24Q50LG9 513 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 C11orf57Q6ZUT1 292 aaPredicted RBP9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 ZNF710Q8N1W2 664 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 MARF1Q9Y4F3 1742 aaKnown RBP9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 CYP27B1O15528 508 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 FAM193AP78312 1265 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 ZNF771Q7L3S4 317 aaPredicted RBP9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 PLCD3Q8N3E9 789 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 PLBD2Q8NHP8 589 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 SMARCE1Q969G3 411 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 N4BP2Q86UW6 1770 aaPredicted RBP9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 E7EWF7 191 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 WTAPQ15007 396 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 STX1AQ16623 288 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 SLF2Q8IX21 1173 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 PSMD1Q99460 953 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 TRMT1Q9NXH9 659 aaKnown RBP9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 FER1L4A9Z1Z3 1794 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 PFKFB2O60825 505 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 MYCP01106 439 aaPredicted RBP9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 HSPD1P10809 573 aaKnown RBP9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 GPR162Q16538 588 aa9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 CACTINQ8WUQ7 758 aaKnown RBP9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 ALDH8A1Q9H2A2 487 aaPredicted RBP9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 GPHNQ9NQX3 736 aaPredicted RBP9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 PUF60Q9UHX1 559 aaKnown RBP9.47□□□□□ -0.89
PTPDC1-204ENST00000620992 A0A1B0GUL7 405 aa9.46□□□□□ -0.89
PTPDC1-204ENST00000620992 hCG_1642624A0A1W2PR95 340 aa9.46□□□□□ -0.89
PTPDC1-204ENST00000620992 TRIM37O94972 964 aa9.46□□□□□ -0.89
PTPDC1-204ENST00000620992 ARID5BQ14865 1188 aa9.46□□□□□ -0.89
PTPDC1-204ENST00000620992 TNIP1Q15025 636 aa9.46□□□□□ -0.89
PTPDC1-204ENST00000620992 TAX1BP1Q86VP1 789 aa9.46□□□□□ -0.89
PTPDC1-204ENST00000620992 LARGE2Q8N3Y3 721 aa9.46□□□□□ -0.89
PTPDC1-204ENST00000620992 CNNM3Q8NE01 707 aa9.46□□□□□ -0.89
PTPDC1-204ENST00000620992 TDRD7Q8NHU6 1098 aaKnown RBP9.46□□□□□ -0.89
PTPDC1-204ENST00000620992 WASF1Q92558 559 aa9.46□□□□□ -0.89
PTPDC1-204ENST00000620992 STK32BQ9NY57 414 aa9.46□□□□□ -0.89
PTPDC1-204ENST00000620992 A0A1B0GVL5 298 aa9.46□□□□□ -0.9
PTPDC1-204ENST00000620992 AXDND1Q5T1B0 1012 aaPredicted RBP9.46□□□□□ -0.9
PTPDC1-204ENST00000620992 CCDC112Q8NEF3 446 aa9.46□□□□□ -0.9
PTPDC1-204ENST00000620992 TCHPQ9BT92 498 aa9.46□□□□□ -0.9
PTPDC1-204ENST00000620992 GPS2Q13227 327 aa9.46□□□□□ -0.9
PTPDC1-204ENST00000620992 CCDC144BQ3MJ40 725 aa9.46□□□□□ -0.9
PTPDC1-204ENST00000620992 EAPPQ56P03 285 aaPredicted RBP9.46□□□□□ -0.9
PTPDC1-204ENST00000620992 IFIT1BQ5T764 474 aaKnown RBP9.46□□□□□ -0.9
PTPDC1-204ENST00000620992 CPXCR1Q8N123 301 aa9.46□□□□□ -0.9
PTPDC1-204ENST00000620992 AOPEPQ8N6M6 819 aa9.46□□□□□ -0.9
PTPDC1-204ENST00000620992 NCOA7Q8NI08 942 aa9.46□□□□□ -0.9
PTPDC1-204ENST00000620992 PUS3Q9BZE2 481 aaKnown RBP9.46□□□□□ -0.9
PTPDC1-204ENST00000620992 GOLPH3LQ9H4A5 285 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms