RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 DOK7Q18PE1 504 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 KRI1Q8N9T8 703 aaKnown RBP10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 GPCPD1Q9NPB8 672 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 ATP10DQ9P241 1426 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 PRDM1O75626 825 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 CAVIN2O95810 425 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 HSPA1LP34931 641 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 CDR1P51861 262 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 VPS36Q86VN1 386 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 NDUFB9Q9Y6M9 179 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 KDM2BQ8NHM5 1336 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 NCOA3Q9Y6Q9 1424 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 DEXIO95424 95 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 KRT79Q5XKE5 535 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 ZNF771Q7L3S4 317 aaPredicted RBP10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 CACNA2D4Q7Z3S7 1137 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 MRPS27Q92552 414 aaKnown RBP10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 LZTS2Q9BRK4 669 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 SRP68Q9UHB9 627 aaKnown RBP10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 RXRAP19793 462 aa10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 CCDC40Q4G0X9 1142 aa10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 PREX1Q8TCU6 1659 aa10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 SPATA31D1Q6ZQQ2 1576 aa10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 NPR1P16066 1061 aa10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 PDE6AP16499 860 aa10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 MTIF2P46199 727 aaKnown RBP10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 DCAF15Q66K64 600 aa10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 NARFQ9UHQ1 456 aa10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 SLC1A4P43007 532 aa10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 CCDC93Q567U6 631 aa10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 LLPHQ9BRT6 129 aaKnown RBP10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 GOPCQ9HD26 462 aa10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 SNX14Q9Y5W7 946 aa10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 PTPRUQ92729 1446 aa10.78□□□□□ -0.68
CLTCL1-208ENST00000615606 EAPPQ56P03 285 aaPredicted RBP10.77□□□□□ -0.68
CLTCL1-208ENST00000615606 KIAA0825Q8IV33 1275 aa10.77□□□□□ -0.68
CLTCL1-208ENST00000615606 DIP2AQ14689 1571 aa10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 SPTLC2O15270 562 aa10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 MMP10P09238 476 aa10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 CTDSPL2Q05D32 466 aa10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 AKNAD1Q5T1N1 836 aa10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 PPARAQ07869 468 aa10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 BICD1Q96G01 975 aa10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 AS3MTQ9HBK9 375 aa10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 CSADQ9Y600 493 aa10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 ZBED4O75132 1171 aa10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 GRAPQ13588 217 aa10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 KIAA1328Q86T90 577 aa10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 GRAPLQ8TC17 118 aaPredicted RBP10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 VTI1AQ96AJ9 217 aa10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 PUS3Q9BZE2 481 aaKnown RBP10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 PNPLA6Q8IY17 1366 aa10.77□□□□□ -0.69
CLTCL1-208ENST00000615606 BIN1O00499 593 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 SFPQP23246 707 aaKnown RBP eCLIP10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 TFAP4Q01664 338 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 CCDC181Q5TID7 509 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 ATL3Q6DD88 541 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 USP37Q86T82 979 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 GTPBP4Q9BZE4 634 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 TOP1P11387 765 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 PHKA1P46020 1223 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 UBE3CQ15386 1083 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 TCERG1LQ5VWI1 586 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 SUSD4Q5VX71 490 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 SEC31BQ9NQW1 1179 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 IVNS1ABPQ9Y6Y0 642 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 BTDP43251 543 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 SPA17Q15506 151 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 ERCC4Q92889 916 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 USP17L12C9JPN9 530 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 USP17L21D6R901 530 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 DTHD1Q6ZMT9 781 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 MASTLQ96GX5 879 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 ATF5Q9Y2D1 282 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 COL15A1P39059 1388 aa10.76□□□□□ -0.69
CLTCL1-208ENST00000615606 PRKCSHP14314 528 aaPredicted RBP10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 MARCKSP29966 332 aaPredicted RBP10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 PRKG1Q13976 671 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 ZYXQ15942 572 aaKnown RBP10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 DALRD3Q5D0E6 543 aaKnown RBP10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 TEX35Q5T0J7 233 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 CCDC174Q6PII3 467 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 DCPSQ96C86 337 aaKnown RBP10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 EDC3Q96F86 508 aaKnown RBP10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 TECPR2O15040 1411 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 SCNN1DP51172 638 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 RRAGBQ5VZM2 374 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 RTKN2Q8IZC4 609 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 CNPY2Q9Y2B0 182 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 H7C1W4 665 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 CPA1P15085 419 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 CETN2P41208 172 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 ARHGAP29Q52LW3 1261 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 SULF1Q8IWU6 871 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 IFNL3Q8IZI9 196 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 BRPF3Q9ULD4 1205 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 CYP19A1P11511 503 aaPredicted RBP10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 MCM7P33993 719 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 ASIC1P78348 528 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms