RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 WDR19Q8NEZ3 1342 aa25.52■■□□□ 1.68
USP6NL-204ENST00000606752 DOK7Q18PE1 504 aa25.51■■□□□ 1.67
USP6NL-204ENST00000606752 CCDC88AQ3V6T2 1871 aa25.51■■□□□ 1.67
USP6NL-204ENST00000606752 MAST2Q6P0Q8 1798 aa25.51■■□□□ 1.67
USP6NL-204ENST00000606752 GRIPAP1Q4V328 841 aa25.51■■□□□ 1.67
USP6NL-204ENST00000606752 CHST3Q7LGC8 479 aa25.51■■□□□ 1.67
USP6NL-204ENST00000606752 UPF1Q92900 1129 aaKnown RBP eCLIP25.51■■□□□ 1.67
USP6NL-204ENST00000606752 SUGT1Q9Y2Z0 365 aa25.51■■□□□ 1.67
USP6NL-204ENST00000606752 PRC1O43663 620 aa25.5■■□□□ 1.67
USP6NL-204ENST00000606752 BAG3O95817 575 aa25.5■■□□□ 1.67
USP6NL-204ENST00000606752 POLD1P28340 1107 aa25.5■■□□□ 1.67
USP6NL-204ENST00000606752 PPP4CP60510 307 aa25.5■■□□□ 1.67
USP6NL-204ENST00000606752 CTDSPL2Q05D32 466 aa25.5■■□□□ 1.67
USP6NL-204ENST00000606752 DIXDC1Q155Q3 683 aa25.5■■□□□ 1.67
USP6NL-204ENST00000606752 AKNAD1Q5T1N1 836 aa25.5■■□□□ 1.67
USP6NL-204ENST00000606752 PODNQ7Z5L7 613 aa25.5■■□□□ 1.67
USP6NL-204ENST00000606752 NECAB1Q8N987 351 aa25.5■■□□□ 1.67
USP6NL-204ENST00000606752 ATP8A2Q9NTI2 1148 aa25.5■■□□□ 1.67
USP6NL-204ENST00000606752 LAMA4Q16363 1823 aa25.5■■□□□ 1.67
USP6NL-204ENST00000606752 DPEP1P16444 411 aa25.49■■□□□ 1.67
USP6NL-204ENST00000606752 KCNA3P22001 575 aa25.49■■□□□ 1.67
USP6NL-204ENST00000606752 ST3GAL1Q11201 340 aa25.49■■□□□ 1.67
USP6NL-204ENST00000606752 TNPO1Q92973 898 aaKnown RBP25.49■■□□□ 1.67
USP6NL-204ENST00000606752 CNNM2Q9H8M5 875 aa25.49■■□□□ 1.67
USP6NL-204ENST00000606752 ANAPC4Q9UJX5 808 aa25.49■■□□□ 1.67
USP6NL-204ENST00000606752 SMC3Q9UQE7 1217 aa25.49■■□□□ 1.67
USP6NL-204ENST00000606752 ATF5Q9Y2D1 282 aaPredicted RBP25.49■■□□□ 1.67
USP6NL-204ENST00000606752 PPARAQ07869 468 aa25.49■■□□□ 1.67
USP6NL-204ENST00000606752 MFSD6Q6ZSS7 791 aa25.49■■□□□ 1.67
USP6NL-204ENST00000606752 SLF2Q8IX21 1173 aa25.49■■□□□ 1.67
USP6NL-204ENST00000606752 STAG1Q8WVM7 1258 aa25.49■■□□□ 1.67
USP6NL-204ENST00000606752 FAM163AQ96GL9 167 aaPredicted RBP25.49■■□□□ 1.67
USP6NL-204ENST00000606752 NOL10Q9BSC4 688 aaKnown RBP25.49■■□□□ 1.67
USP6NL-204ENST00000606752 MROH7-TTC4A0A0A0MT08 1334 aa25.49■■□□□ 1.67
USP6NL-204ENST00000606752 C21orf2O43822 256 aa25.48■■□□□ 1.67
USP6NL-204ENST00000606752 ANTXR2P58335 489 aa25.48■■□□□ 1.67
USP6NL-204ENST00000606752 CERS3Q8IU89 383 aa25.48■■□□□ 1.67
USP6NL-204ENST00000606752 SUPT20HQ8NEM7 779 aa25.48■■□□□ 1.67
USP6NL-204ENST00000606752 R3HDM1Q15032 1099 aaKnown RBP25.47■■□□□ 1.67
USP6NL-204ENST00000606752 KRT23Q9C075 422 aa25.47■■□□□ 1.67
USP6NL-204ENST00000606752 RNF41Q9H4P4 317 aaPredicted RBP25.47■■□□□ 1.67
USP6NL-204ENST00000606752 DCP1AQ9NPI6 582 aaPredicted RBP25.47■■□□□ 1.67
USP6NL-204ENST00000606752 SNED1Q8TER0 1413 aa25.47■■□□□ 1.67
USP6NL-204ENST00000606752 NEDD4P46934 1319 aa25.47■■□□□ 1.67
USP6NL-204ENST00000606752 MINDY4BA8MYZ0 360 aa25.47■■□□□ 1.67
USP6NL-204ENST00000606752 EVCP57679 992 aa25.47■■□□□ 1.67
USP6NL-204ENST00000606752 TGFB2P61812 414 aa25.47■■□□□ 1.67
USP6NL-204ENST00000606752 APOBRQ0VD83 1088 aa25.47■■□□□ 1.67
USP6NL-204ENST00000606752 PKP1Q13835 747 aa25.47■■□□□ 1.67
USP6NL-204ENST00000606752 B4E1Z4 1266 aa25.46■■□□□ 1.67
USP6NL-204ENST00000606752 STK3Q13188 491 aa25.46■■□□□ 1.67
USP6NL-204ENST00000606752 CTR9Q6PD62 1173 aa25.46■■□□□ 1.67
USP6NL-204ENST00000606752 GTF3C6Q969F1 213 aa25.46■■□□□ 1.67
USP6NL-204ENST00000606752 FBXW7Q969H0 707 aa25.46■■□□□ 1.67
USP6NL-204ENST00000606752 ZNF274Q96GC6 653 aaPredicted RBP25.46■■□□□ 1.67
USP6NL-204ENST00000606752 INCENPQ9NQS7 918 aa25.46■■□□□ 1.67
USP6NL-204ENST00000606752 TACC3Q9Y6A5 838 aa25.46■■□□□ 1.67
USP6NL-204ENST00000606752 GPR75-ASB3A0A0A6YYF3 556 aa25.45■■□□□ 1.66
USP6NL-204ENST00000606752 CYB5R4Q7L1T6 521 aa25.45■■□□□ 1.66
USP6NL-204ENST00000606752 DBNDD1Q9H9R9 158 aa25.45■■□□□ 1.66
USP6NL-204ENST00000606752 KIAA1551Q9HCM1 1747 aa25.45■■□□□ 1.66
USP6NL-204ENST00000606752 USP17L12C9JPN9 530 aa25.44■■□□□ 1.66
USP6NL-204ENST00000606752 USP17L21D6R901 530 aa25.44■■□□□ 1.66
USP6NL-204ENST00000606752 PFKFB2O60825 505 aa25.44■■□□□ 1.66
USP6NL-204ENST00000606752 CCDC93Q567U6 631 aa25.44■■□□□ 1.66
USP6NL-204ENST00000606752 RTKN2Q8IZC4 609 aa25.44■■□□□ 1.66
USP6NL-204ENST00000606752 CHD4Q14839 1912 aa25.44■■□□□ 1.66
USP6NL-204ENST00000606752 KIAA2012Q0VF49 1180 aa25.44■■□□□ 1.66
USP6NL-204ENST00000606752 CERS5Q8N5B7 392 aa25.44■■□□□ 1.66
USP6NL-204ENST00000606752 SH3RF3Q8TEJ3 882 aaPredicted RBP25.44■■□□□ 1.66
USP6NL-204ENST00000606752 ZDHHC9Q9Y397 364 aa25.44■■□□□ 1.66
USP6NL-204ENST00000606752 GAKO14976 1311 aa25.43■■□□□ 1.66
USP6NL-204ENST00000606752 BTDP43251 543 aa25.43■■□□□ 1.66
USP6NL-204ENST00000606752 SBK1Q52WX2 424 aa25.43■■□□□ 1.66
USP6NL-204ENST00000606752 NKX2-3Q8TAU0 364 aa25.43■■□□□ 1.66
USP6NL-204ENST00000606752 TMEM87BQ96K49 555 aa25.43■■□□□ 1.66
USP6NL-204ENST00000606752 GPHNQ9NQX3 736 aaPredicted RBP25.43■■□□□ 1.66
USP6NL-204ENST00000606752 ZSWIM5Q9P217 1185 aa25.43■■□□□ 1.66
USP6NL-204ENST00000606752 TIAM2Q8IVF5 1701 aa25.43■■□□□ 1.66
USP6NL-204ENST00000606752 BRD1O95696 1058 aa25.42■■□□□ 1.66
USP6NL-204ENST00000606752 PCP11498 1178 aaKnown RBP25.42■■□□□ 1.66
USP6NL-204ENST00000606752 PLCG2P16885 1265 aa25.42■■□□□ 1.66
USP6NL-204ENST00000606752 GJB2P29033 226 aa25.42■■□□□ 1.66
USP6NL-204ENST00000606752 PDIA3P30101 505 aaKnown RBP25.42■■□□□ 1.66
USP6NL-204ENST00000606752 CLEC17AQ6ZS10 378 aa25.42■■□□□ 1.66
USP6NL-204ENST00000606752 GBP4Q96PP9 640 aa25.42■■□□□ 1.66
USP6NL-204ENST00000606752 ARPP21Q9UBL0 812 aaPredicted RBP25.42■■□□□ 1.66
USP6NL-204ENST00000606752 DLEC1Q9Y238 1755 aa25.42■■□□□ 1.66
USP6NL-204ENST00000606752 ECE2O60344 883 aa25.42■■□□□ 1.66
USP6NL-204ENST00000606752 KDM4AO75164 1064 aa25.42■■□□□ 1.66
USP6NL-204ENST00000606752 MCM4P33991 863 aa25.42■■□□□ 1.66
USP6NL-204ENST00000606752 USP5P45974 858 aa25.42■■□□□ 1.66
USP6NL-204ENST00000606752 AOC3Q16853 763 aa25.42■■□□□ 1.66
USP6NL-204ENST00000606752 CHMP4CQ96CF2 233 aa25.42■■□□□ 1.66
USP6NL-204ENST00000606752 MKRN1Q9UHC7 482 aaKnown RBP25.42■■□□□ 1.66
USP6NL-204ENST00000606752 ANGEL1Q9UNK9 670 aaKnown RBP25.42■■□□□ 1.66
USP6NL-204ENST00000606752 FKBP1AP62942 108 aaKnown RBP25.41■■□□□ 1.66
USP6NL-204ENST00000606752 SCRN1Q12765 414 aa25.41■■□□□ 1.66
USP6NL-204ENST00000606752 STRIP1Q5VSL9 837 aa25.41■■□□□ 1.66
USP6NL-204ENST00000606752 TOMM22Q9NS69 142 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms