RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 PPP4R2Q9NY27 417 aa13.62□□□□□ -0.23
XRCC1-204ENST00000594511 RAI14Q9P0K7 980 aa13.62□□□□□ -0.23
XRCC1-204ENST00000594511 PPP2R3BQ9Y5P8 575 aa13.62□□□□□ -0.23
XRCC1-204ENST00000594511 PDE6AP16499 860 aa13.61□□□□□ -0.23
XRCC1-204ENST00000594511 ADD2P35612 726 aa13.61□□□□□ -0.23
XRCC1-204ENST00000594511 RBM5P52756 815 aaKnown RBP eCLIP13.61□□□□□ -0.23
XRCC1-204ENST00000594511 UBE3CQ15386 1083 aa13.61□□□□□ -0.23
XRCC1-204ENST00000594511 TSHZ3Q63HK5 1081 aa13.61□□□□□ -0.23
XRCC1-204ENST00000594511 KRT26Q7Z3Y9 468 aa13.61□□□□□ -0.23
XRCC1-204ENST00000594511 ADGRA1Q86SQ6 560 aa13.61□□□□□ -0.23
XRCC1-204ENST00000594511 USP48Q86UV5 1035 aa13.61□□□□□ -0.23
XRCC1-204ENST00000594511 CERS3Q8IU89 383 aa13.61□□□□□ -0.23
XRCC1-204ENST00000594511 DNAJC2Q99543 621 aaKnown RBP13.61□□□□□ -0.23
XRCC1-204ENST00000594511 GLIS2Q9BZE0 524 aaPredicted RBP13.61□□□□□ -0.23
XRCC1-204ENST00000594511 TRPM7Q96QT4 1865 aa13.61□□□□□ -0.23
XRCC1-204ENST00000594511 CNTNAP1P78357 1384 aa13.6□□□□□ -0.23
XRCC1-204ENST00000594511 IDH1O75874 414 aaKnown RBP13.6□□□□□ -0.23
XRCC1-204ENST00000594511 SULF1Q8IWU6 871 aa13.6□□□□□ -0.23
XRCC1-204ENST00000594511 TEPSINQ96N21 525 aa13.6□□□□□ -0.23
XRCC1-204ENST00000594511 RIOK1Q9BRS2 568 aaKnown RBP13.6□□□□□ -0.23
XRCC1-204ENST00000594511 MYH7P12883 1935 aa13.6□□□□□ -0.23
XRCC1-204ENST00000594511 ENTPD3O75355 529 aa13.59□□□□□ -0.23
XRCC1-204ENST00000594511 WDHD1O75717 1129 aaPredicted RBP13.59□□□□□ -0.23
XRCC1-204ENST00000594511 CYP7A1P22680 504 aa13.59□□□□□ -0.23
XRCC1-204ENST00000594511 BTDP43251 543 aa13.59□□□□□ -0.23
XRCC1-204ENST00000594511 TNFAIP1Q13829 316 aa13.59□□□□□ -0.23
XRCC1-204ENST00000594511 SLC9C2Q5TAH2 1124 aa13.59□□□□□ -0.23
XRCC1-204ENST00000594511 CST9Q5W186 159 aa13.59□□□□□ -0.23
XRCC1-204ENST00000594511 MAGEB6Q8N7X4 407 aa13.59□□□□□ -0.23
XRCC1-204ENST00000594511 CCDC136Q96JN2 1154 aa13.59□□□□□ -0.23
XRCC1-204ENST00000594511 DEFB129Q9H1M3 183 aa13.59□□□□□ -0.23
XRCC1-204ENST00000594511 USP40Q9NVE5 1235 aa13.59□□□□□ -0.23
XRCC1-204ENST00000594511 FAM198AQ9UFP1 575 aa13.59□□□□□ -0.23
XRCC1-204ENST00000594511 RPAP1Q9BWH6 1393 aaPredicted RBP13.58□□□□□ -0.23
XRCC1-204ENST00000594511 CLRN2A0PK11 232 aa13.58□□□□□ -0.24
XRCC1-204ENST00000594511 ADM5C9JUS6 153 aa13.58□□□□□ -0.24
XRCC1-204ENST00000594511 TRAF5O00463 557 aa13.58□□□□□ -0.24
XRCC1-204ENST00000594511 BAG3O95817 575 aa13.58□□□□□ -0.24
XRCC1-204ENST00000594511 ZFYP08048 801 aaPredicted RBP13.58□□□□□ -0.24
XRCC1-204ENST00000594511 PLCG2P16885 1265 aa13.58□□□□□ -0.24
XRCC1-204ENST00000594511 APLP1P51693 650 aa13.58□□□□□ -0.24
XRCC1-204ENST00000594511 RASA3Q14644 834 aa13.58□□□□□ -0.24
XRCC1-204ENST00000594511 ZSCAN25Q6NSZ9 544 aa13.58□□□□□ -0.24
XRCC1-204ENST00000594511 FAM151AQ8WW52 585 aa13.58□□□□□ -0.24
XRCC1-204ENST00000594511 EVI5LQ96CN4 794 aa13.58□□□□□ -0.24
XRCC1-204ENST00000594511 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.58□□□□□ -0.24
XRCC1-204ENST00000594511 COL2A1P02458 1487 aaPredicted RBP13.58□□□□□ -0.24
XRCC1-204ENST00000594511 ZNF532Q9HCE3 1301 aa13.58□□□□□ -0.24
XRCC1-204ENST00000594511 RNF113AO15541 343 aaKnown RBP13.57□□□□□ -0.24
XRCC1-204ENST00000594511 MAP3K10Q02779 954 aa13.57□□□□□ -0.24
XRCC1-204ENST00000594511 FMR1Q06787 632 aaKnown RBP eCLIP13.57□□□□□ -0.24
XRCC1-204ENST00000594511 DLK2Q6UY11 383 aa13.57□□□□□ -0.24
XRCC1-204ENST00000594511 CDCA5Q96FF9 252 aa13.57□□□□□ -0.24
XRCC1-204ENST00000594511 BCL11AQ9H165 835 aa13.57□□□□□ -0.24
XRCC1-204ENST00000594511 MKRN1Q9UHC7 482 aaKnown RBP13.57□□□□□ -0.24
XRCC1-204ENST00000594511 FOCADQ5VW36 1801 aa13.57□□□□□ -0.24
XRCC1-204ENST00000594511 CDK5RAP2Q96SN8 1893 aa13.57□□□□□ -0.24
XRCC1-204ENST00000594511 HSPA6P17066 643 aa13.56□□□□□ -0.24
XRCC1-204ENST00000594511 TNNI2P48788 182 aa13.56□□□□□ -0.24
XRCC1-204ENST00000594511 FKBP1BP68106 108 aa13.56□□□□□ -0.24
XRCC1-204ENST00000594511 NFIAQ12857 509 aa13.56□□□□□ -0.24
XRCC1-204ENST00000594511 MAP3K11Q16584 847 aa13.56□□□□□ -0.24
XRCC1-204ENST00000594511 LRRFIP1Q32MZ4 808 aaKnown RBP13.56□□□□□ -0.24
XRCC1-204ENST00000594511 TTC22Q5TAA0 569 aa13.56□□□□□ -0.24
XRCC1-204ENST00000594511 DDX4Q9NQI0 724 aaKnown RBP13.56□□□□□ -0.24
XRCC1-204ENST00000594511 CREBZFQ9NS37 354 aa13.56□□□□□ -0.24
XRCC1-204ENST00000594511 TMOD2Q9NZR1 351 aa13.56□□□□□ -0.24
XRCC1-204ENST00000594511 ATRNL1Q5VV63 1379 aa13.56□□□□□ -0.24
XRCC1-204ENST00000594511 UNCXA6NJT0 531 aa13.55□□□□□ -0.24
XRCC1-204ENST00000594511 TMEM88BA6NKF7 163 aa13.55□□□□□ -0.24
XRCC1-204ENST00000594511 TCP10L2B9ZVM9 353 aa13.55□□□□□ -0.24
XRCC1-204ENST00000594511 CHGBP05060 677 aa13.55□□□□□ -0.24
XRCC1-204ENST00000594511 CACNB3P54284 484 aa13.55□□□□□ -0.24
XRCC1-204ENST00000594511 DYNLL1P63167 89 aaKnown RBP13.55□□□□□ -0.24
XRCC1-204ENST00000594511 ZMYM1Q5SVZ6 1142 aa13.55□□□□□ -0.24
XRCC1-204ENST00000594511 METTL16Q86W50 562 aaKnown RBP13.55□□□□□ -0.24
XRCC1-204ENST00000594511 SH3RF3Q8TEJ3 882 aaPredicted RBP13.55□□□□□ -0.24
XRCC1-204ENST00000594511 APPBP2Q92624 585 aa13.55□□□□□ -0.24
XRCC1-204ENST00000594511 OSBP2Q969R2 916 aa13.55□□□□□ -0.24
XRCC1-204ENST00000594511 HHIPL1Q96JK4 782 aa13.55□□□□□ -0.24
XRCC1-204ENST00000594511 VEZTQ9HBM0 779 aa13.55□□□□□ -0.24
XRCC1-204ENST00000594511 AATFQ9NY61 560 aaKnown RBP eCLIP13.55□□□□□ -0.24
XRCC1-204ENST00000594511 SCAF8Q9UPN6 1271 aaKnown RBP13.55□□□□□ -0.24
XRCC1-204ENST00000594511 SSC5DA1L4H1 1573 aa13.54□□□□□ -0.24
XRCC1-204ENST00000594511 GSPT1P15170 499 aaKnown RBP13.54□□□□□ -0.24
XRCC1-204ENST00000594511 RGS3P49796 1198 aa13.54□□□□□ -0.24
XRCC1-204ENST00000594511 SUPT20HL1Q3ZLR7 823 aa13.54□□□□□ -0.24
XRCC1-204ENST00000594511 SLFNL1Q499Z3 407 aa13.54□□□□□ -0.24
XRCC1-204ENST00000594511 NBPF12Q5TAG4 269 aaPredicted RBP13.54□□□□□ -0.24
XRCC1-204ENST00000594511 SH3BP5LQ7L8J4 393 aa13.54□□□□□ -0.24
XRCC1-204ENST00000594511 ZFPM1Q8IX07 1006 aa13.54□□□□□ -0.24
XRCC1-204ENST00000594511 TMEM39BQ9GZU3 492 aa13.54□□□□□ -0.24
XRCC1-204ENST00000594511 PAPPA2Q9BXP8 1791 aa13.53□□□□□ -0.24
XRCC1-204ENST00000594511 MAGEB6P1A0A0J9YX57 407 aa13.53□□□□□ -0.24
XRCC1-204ENST00000594511 TBC1D12O60347 775 aa13.53□□□□□ -0.24
XRCC1-204ENST00000594511 CELF2O95319 508 aaKnown RBP13.53□□□□□ -0.24
XRCC1-204ENST00000594511 LDLRAD1Q5T700 205 aa13.53□□□□□ -0.24
XRCC1-204ENST00000594511 PRAMEF18Q5VWM3 479 aa13.53□□□□□ -0.24
XRCC1-204ENST00000594511 TEX11Q8IYF3 940 aa13.53□□□□□ -0.24
XRCC1-204ENST00000594511 STRBPQ96SI9 672 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms