RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 B4E1Z4 1266 aa19.09■□□□□ 0.65
LIG1-206ENST00000594067 CDC27P30260 824 aa19.09■□□□□ 0.65
LIG1-206ENST00000594067 SLC39A14Q15043 492 aa19.09■□□□□ 0.65
LIG1-206ENST00000594067 FAM53CQ9NYF3 392 aa19.09■□□□□ 0.65
LIG1-206ENST00000594067 SH2B2O14492 632 aaPredicted RBP19.08■□□□□ 0.65
LIG1-206ENST00000594067 KRT40Q6A162 431 aa19.08■□□□□ 0.65
LIG1-206ENST00000594067 MICU3Q86XE3 530 aa19.08■□□□□ 0.65
LIG1-206ENST00000594067 VPS37DQ86XT2 251 aa19.08■□□□□ 0.65
LIG1-206ENST00000594067 ZNF532Q9HCE3 1301 aa19.08■□□□□ 0.64
LIG1-206ENST00000594067 EVA1CP58658 441 aa19.08■□□□□ 0.64
LIG1-206ENST00000594067 NCAPHQ15003 741 aa19.08■□□□□ 0.64
LIG1-206ENST00000594067 FBXO38Q6PIJ6 1188 aa19.08■□□□□ 0.64
LIG1-206ENST00000594067 GIGYF2Q6Y7W6 1299 aaKnown RBP19.08■□□□□ 0.64
LIG1-206ENST00000594067 INCENPQ9NQS7 918 aa19.08■□□□□ 0.64
LIG1-206ENST00000594067 IMPACTQ9P2X3 320 aa19.08■□□□□ 0.64
LIG1-206ENST00000594067 MAP3K15Q6ZN16 1313 aa19.08■□□□□ 0.64
LIG1-206ENST00000594067 ANKRD18BA2A2Z9 1011 aa19.08■□□□□ 0.64
LIG1-206ENST00000594067 GNL2Q13823 731 aaKnown RBP19.08■□□□□ 0.64
LIG1-206ENST00000594067 ELF2Q15723 593 aa19.08■□□□□ 0.64
LIG1-206ENST00000594067 ARMCX5Q6P1M9 558 aa19.08■□□□□ 0.64
LIG1-206ENST00000594067 NLRP10Q86W26 655 aa19.08■□□□□ 0.64
LIG1-206ENST00000594067 KRT222Q8N1A0 295 aa19.08■□□□□ 0.64
LIG1-206ENST00000594067 PIGBQ92521 554 aa19.08■□□□□ 0.64
LIG1-206ENST00000594067 APOA5Q6Q788 366 aa19.07■□□□□ 0.64
LIG1-206ENST00000594067 MYL10Q9BUA6 226 aa19.07■□□□□ 0.64
LIG1-206ENST00000594067 WWC3Q9ULE0 1092 aa19.07■□□□□ 0.64
LIG1-206ENST00000594067 SLU7O95391 586 aaKnown RBP19.07■□□□□ 0.64
LIG1-206ENST00000594067 LMOD1P29536 600 aaPredicted RBP19.07■□□□□ 0.64
LIG1-206ENST00000594067 SYKP43405 635 aa19.07■□□□□ 0.64
LIG1-206ENST00000594067 PHKA1P46020 1223 aa19.07■□□□□ 0.64
LIG1-206ENST00000594067 CTSWP56202 376 aa19.07■□□□□ 0.64
LIG1-206ENST00000594067 TPM4P67936 248 aa19.07■□□□□ 0.64
LIG1-206ENST00000594067 TERF2Q15554 542 aa19.06■□□□□ 0.64
LIG1-206ENST00000594067 E4F1Q66K89 784 aaPredicted RBP19.06■□□□□ 0.64
LIG1-206ENST00000594067 NFXL1Q6ZNB6 911 aa19.06■□□□□ 0.64
LIG1-206ENST00000594067 IRS4O14654 1257 aaPredicted RBP19.06■□□□□ 0.64
LIG1-206ENST00000594067 STARD3NLO95772 234 aa19.06■□□□□ 0.64
LIG1-206ENST00000594067 PDE6AP16499 860 aa19.06■□□□□ 0.64
LIG1-206ENST00000594067 TTF1Q15361 905 aaPredicted RBP19.06■□□□□ 0.64
LIG1-206ENST00000594067 SHC4Q6S5L8 630 aa19.06■□□□□ 0.64
LIG1-206ENST00000594067 VGLL2Q8N8G2 317 aa19.06■□□□□ 0.64
LIG1-206ENST00000594067 CLIC6Q96NY7 704 aa19.06■□□□□ 0.64
LIG1-206ENST00000594067 CDHR2Q9BYE9 1310 aa19.05■□□□□ 0.64
LIG1-206ENST00000594067 UBE2Q2LH0YL09 131 aa19.05■□□□□ 0.64
LIG1-206ENST00000594067 KIF2AO00139 706 aaPredicted RBP19.05■□□□□ 0.64
LIG1-206ENST00000594067 CDKL5O76039 1030 aa19.05■□□□□ 0.64
LIG1-206ENST00000594067 UBE3CQ15386 1083 aa19.05■□□□□ 0.64
LIG1-206ENST00000594067 CCDC102BQ68D86 513 aa19.05■□□□□ 0.64
LIG1-206ENST00000594067 HELBQ8NG08 1087 aaPredicted RBP19.05■□□□□ 0.64
LIG1-206ENST00000594067 TEX13AQ9BXU3 409 aaPredicted RBP19.05■□□□□ 0.64
LIG1-206ENST00000594067 ATP1A3P13637 1013 aa19.05■□□□□ 0.64
LIG1-206ENST00000594067 CPLX2Q6PUV4 134 aaKnown RBP19.05■□□□□ 0.64
LIG1-206ENST00000594067 SYTL4Q96C24 671 aaPredicted RBP19.05■□□□□ 0.64
LIG1-206ENST00000594067 C4AP0C0L4 1744 aa19.05■□□□□ 0.64
LIG1-206ENST00000594067 C4BP0C0L5 1744 aa19.05■□□□□ 0.64
LIG1-206ENST00000594067 ZBTB43O43298 467 aa19.04■□□□□ 0.64
LIG1-206ENST00000594067 PDE8BO95263 885 aa19.04■□□□□ 0.64
LIG1-206ENST00000594067 SFPQP23246 707 aaKnown RBP eCLIP19.04■□□□□ 0.64
LIG1-206ENST00000594067 FANCCQ00597 558 aa19.04■□□□□ 0.64
LIG1-206ENST00000594067 PTPAQ15257 358 aa19.04■□□□□ 0.64
LIG1-206ENST00000594067 CCDC150Q8NCX0 1101 aa19.04■□□□□ 0.64
LIG1-206ENST00000594067 TRMT112Q9UI30 125 aaKnown RBP19.04■□□□□ 0.64
LIG1-206ENST00000594067 GOLGA8AA7E2F4 631 aa19.04■□□□□ 0.64
LIG1-206ENST00000594067 RANBP6O60518 1105 aaKnown RBP19.04■□□□□ 0.64
LIG1-206ENST00000594067 PNOCQ13519 176 aa19.04■□□□□ 0.64
LIG1-206ENST00000594067 IGDCC4Q8TDY8 1250 aa19.04■□□□□ 0.64
LIG1-206ENST00000594067 AIDAQ96BJ3 306 aa19.04■□□□□ 0.64
LIG1-206ENST00000594067 ZNF512BQ96KM6 892 aaPredicted RBP19.04■□□□□ 0.64
LIG1-206ENST00000594067 L2HGDHQ9H9P8 463 aa19.04■□□□□ 0.64
LIG1-206ENST00000594067 TBC1D2BQ9UPU7 963 aa19.04■□□□□ 0.64
LIG1-206ENST00000594067 HPSEQ9Y251 543 aa19.04■□□□□ 0.64
LIG1-206ENST00000594067 IARSP41252 1262 aaKnown RBP19.03■□□□□ 0.64
LIG1-206ENST00000594067 TMEM67Q5HYA8 995 aa19.03■□□□□ 0.64
LIG1-206ENST00000594067 TIGD1Q96MW7 591 aa19.03■□□□□ 0.64
LIG1-206ENST00000594067 PPP6R2O75170 966 aa19.03■□□□□ 0.64
LIG1-206ENST00000594067 NTRK3Q16288 839 aa19.03■□□□□ 0.64
LIG1-206ENST00000594067 STRBPQ96SI9 672 aaKnown RBP19.03■□□□□ 0.64
LIG1-206ENST00000594067 MAP3K14Q99558 947 aa19.03■□□□□ 0.64
LIG1-206ENST00000594067 HSD3B7Q9H2F3 369 aa19.03■□□□□ 0.64
LIG1-206ENST00000594067 LY9Q9HBG7 655 aa19.03■□□□□ 0.64
LIG1-206ENST00000594067 TUBE1Q9UJT0 475 aa19.03■□□□□ 0.64
LIG1-206ENST00000594067 DDX60Q8IY21 1712 aaKnown RBP19.02■□□□□ 0.64
LIG1-206ENST00000594067 AKAP11Q9UKA4 1901 aa19.02■□□□□ 0.64
LIG1-206ENST00000594067 TCRBV5S4A2TA0A5A2 114 aa19.02■□□□□ 0.64
LIG1-206ENST00000594067 CTDSPL2Q05D32 466 aa19.02■□□□□ 0.64
LIG1-206ENST00000594067 JMYQ8N9B5 988 aa19.02■□□□□ 0.64
LIG1-206ENST00000594067 TMEM87BQ96K49 555 aa19.02■□□□□ 0.64
LIG1-206ENST00000594067 PPP1R13BQ96KQ4 1090 aa19.02■□□□□ 0.64
LIG1-206ENST00000594067 FAM217BQ9NTX9 383 aaPredicted RBP19.02■□□□□ 0.64
LIG1-206ENST00000594067 ZNF446Q9NWS9 450 aa19.02■□□□□ 0.64
LIG1-206ENST00000594067 SHANK3Q9BYB0 1731 aa19.02■□□□□ 0.64
LIG1-206ENST00000594067 ATRNO75882 1429 aa19.02■□□□□ 0.64
LIG1-206ENST00000594067 TRIM29Q14134 588 aa19.02■□□□□ 0.63
LIG1-206ENST00000594067 SLC26A6Q9BXS9 759 aa19.02■□□□□ 0.63
LIG1-206ENST00000594067 MYH7P12883 1935 aa19.02■□□□□ 0.63
LIG1-206ENST00000594067 TOGARAM1Q9Y4F4 1720 aa19.02■□□□□ 0.63
LIG1-206ENST00000594067 IKBKBO14920 756 aa19.01■□□□□ 0.63
LIG1-206ENST00000594067 DPF2Q92785 391 aa19.01■□□□□ 0.63
LIG1-206ENST00000594067 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.01■□□□□ 0.63
LIG1-206ENST00000594067 UBN2Q6ZU65 1347 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms