RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 KRT82Q9NSB4 513 aa6.77□□□□□ -1.33
TPM4-214ENST00000591645 FAM95CA0A1B0GW59 222 aa6.76□□□□□ -1.33
TPM4-214ENST00000591645 GIPC1O14908 333 aa6.76□□□□□ -1.33
TPM4-214ENST00000591645 USP11P51784 963 aa6.76□□□□□ -1.33
TPM4-214ENST00000591645 HNRNPUQ00839 825 aaKnown RBP eCLIP6.76□□□□□ -1.33
TPM4-214ENST00000591645 PPP2R3AQ06190 1150 aa6.76□□□□□ -1.33
TPM4-214ENST00000591645 CDPF1Q6NVV7 123 aa6.76□□□□□ -1.33
TPM4-214ENST00000591645 PAOXQ6QHF9 649 aa6.76□□□□□ -1.33
TPM4-214ENST00000591645 C3orf58Q8NDZ4 430 aa6.76□□□□□ -1.33
TPM4-214ENST00000591645 ANKRD24Q8TF21 1146 aa6.76□□□□□ -1.33
TPM4-214ENST00000591645 MFSD14AQ96MC6 490 aa6.76□□□□□ -1.33
TPM4-214ENST00000591645 WDR18Q9BV38 432 aa6.76□□□□□ -1.33
TPM4-214ENST00000591645 TMEM39AQ9NV64 488 aa6.76□□□□□ -1.33
TPM4-214ENST00000591645 ACTL7BQ9Y614 415 aa6.76□□□□□ -1.33
TPM4-214ENST00000591645 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.75□□□□□ -1.33
TPM4-214ENST00000591645 AOC2O75106 756 aa6.75□□□□□ -1.33
TPM4-214ENST00000591645 YBX3P16989 372 aaKnown RBP eCLIP6.75□□□□□ -1.33
TPM4-214ENST00000591645 GSTT1P30711 240 aa6.75□□□□□ -1.33
TPM4-214ENST00000591645 NXPE4Q6UWF7 544 aa6.75□□□□□ -1.33
TPM4-214ENST00000591645 FBLIM1Q8WUP2 373 aa6.75□□□□□ -1.33
TPM4-214ENST00000591645 PPM1HQ9ULR3 514 aa6.75□□□□□ -1.33
TPM4-214ENST00000591645 GSTP1P09211 210 aaKnown RBP6.74□□□□□ -1.33
TPM4-214ENST00000591645 RXRBP28702 533 aa6.74□□□□□ -1.33
TPM4-214ENST00000591645 MAPK8P45983 427 aa6.74□□□□□ -1.33
TPM4-214ENST00000591645 ATP2B2Q01814 1243 aa6.74□□□□□ -1.33
TPM4-214ENST00000591645 PDE3AQ14432 1141 aa6.74□□□□□ -1.33
TPM4-214ENST00000591645 AKAP4Q5JQC9 854 aa6.74□□□□□ -1.33
TPM4-214ENST00000591645 PDZD3Q86UT5 571 aa6.74□□□□□ -1.33
TPM4-214ENST00000591645 GIMAP7Q8NHV1 300 aa6.74□□□□□ -1.33
TPM4-214ENST00000591645 CCDC86Q9H6F5 360 aaKnown RBP6.74□□□□□ -1.33
TPM4-214ENST00000591645 ACSS3Q9H6R3 686 aa6.74□□□□□ -1.33
TPM4-214ENST00000591645 RAD18Q9NS91 495 aa6.74□□□□□ -1.33
TPM4-214ENST00000591645 GPN3Q9UHW5 284 aaPredicted RBP6.74□□□□□ -1.33
TPM4-214ENST00000591645 ADGRE2Q9UHX3 823 aa6.74□□□□□ -1.33
TPM4-214ENST00000591645 MAP7Q14244 749 aa6.73□□□□□ -1.33
TPM4-214ENST00000591645 COL19A1Q14993 1142 aa6.73□□□□□ -1.33
TPM4-214ENST00000591645 KIF4BQ2VIQ3 1234 aa6.73□□□□□ -1.33
TPM4-214ENST00000591645 SND1Q7KZF4 910 aaKnown RBP eCLIP6.73□□□□□ -1.33
TPM4-214ENST00000591645 FBXL6Q8N531 539 aa6.73□□□□□ -1.33
TPM4-214ENST00000591645 FAM105AQ9NUU6 356 aa6.73□□□□□ -1.33
TPM4-214ENST00000591645 PRKAG2Q9UGJ0 569 aa6.73□□□□□ -1.33
TPM4-214ENST00000591645 F13BP05160 661 aa6.72□□□□□ -1.33
TPM4-214ENST00000591645 P4HBP07237 508 aaKnown RBP6.72□□□□□ -1.33
TPM4-214ENST00000591645 DYMQ7RTS9 669 aa6.72□□□□□ -1.33
TPM4-214ENST00000591645 ZAR1Q86SH2 424 aa6.72□□□□□ -1.33
TPM4-214ENST00000591645 SULF2Q8IWU5 870 aa6.72□□□□□ -1.33
TPM4-214ENST00000591645 SHISA5Q8N114 240 aa6.72□□□□□ -1.33
TPM4-214ENST00000591645 FRMD6Q96NE9 622 aa6.72□□□□□ -1.33
TPM4-214ENST00000591645 METTL22Q9BUU2 404 aaPredicted RBP6.72□□□□□ -1.33
TPM4-214ENST00000591645 SEMA6CQ9H3T2 930 aa6.72□□□□□ -1.33
TPM4-214ENST00000591645 CRIM1Q9NZV1 1036 aa6.72□□□□□ -1.33
TPM4-214ENST00000591645 PIM2Q9P1W9 311 aa6.72□□□□□ -1.33
TPM4-214ENST00000591645 PPP1R9AQ9ULJ8 1098 aa6.72□□□□□ -1.33
TPM4-214ENST00000591645 AP4E1Q9UPM8 1137 aa6.72□□□□□ -1.33
TPM4-214ENST00000591645 SPG7Q9UQ90 795 aa6.72□□□□□ -1.33
TPM4-214ENST00000591645 PCDHGC5Q9Y5F6 944 aa6.72□□□□□ -1.33
TPM4-214ENST00000591645 TMPRSS2O15393 492 aa6.71□□□□□ -1.34
TPM4-214ENST00000591645 ZNF862O60290 1169 aa6.71□□□□□ -1.34
TPM4-214ENST00000591645 NME2P22392 152 aa6.71□□□□□ -1.34
TPM4-214ENST00000591645 ZNF157P51786 506 aaPredicted RBP6.71□□□□□ -1.34
TPM4-214ENST00000591645 NFKBIBQ15653 356 aa6.71□□□□□ -1.34
TPM4-214ENST00000591645 ABI1Q8IZP0 508 aa6.71□□□□□ -1.34
TPM4-214ENST00000591645 GATA6Q92908 595 aa6.71□□□□□ -1.34
TPM4-214ENST00000591645 NECAB3Q96P71 396 aaPredicted RBP6.71□□□□□ -1.34
TPM4-214ENST00000591645 SETDB2Q96T68 719 aa6.71□□□□□ -1.34
TPM4-214ENST00000591645 OSBPL7Q9BZF2 842 aa6.71□□□□□ -1.34
TPM4-214ENST00000591645 CEP44Q9C0F1 390 aa6.71□□□□□ -1.34
TPM4-214ENST00000591645 ATG3Q9NT62 314 aa6.71□□□□□ -1.34
TPM4-214ENST00000591645 CACNA2D2Q9NY47 1150 aa6.71□□□□□ -1.34
TPM4-214ENST00000591645 AKAP2Q9Y2D5 859 aa6.71□□□□□ -1.34
TPM4-214ENST00000591645 SLFN14P0C7P3 912 aa6.7□□□□□ -1.34
TPM4-214ENST00000591645 PDIA4P13667 645 aaKnown RBP6.7□□□□□ -1.34
TPM4-214ENST00000591645 RAB6AP20340 208 aa6.7□□□□□ -1.34
TPM4-214ENST00000591645 ARNTP27540 789 aa6.7□□□□□ -1.34
TPM4-214ENST00000591645 ASPAP45381 313 aa6.7□□□□□ -1.34
TPM4-214ENST00000591645 ID3Q02535 119 aa6.7□□□□□ -1.34
TPM4-214ENST00000591645 ZNF252P-AS1Q0IIN9 211 aa6.7□□□□□ -1.34
TPM4-214ENST00000591645 SEZ6L2Q6UXD5 910 aa6.7□□□□□ -1.34
TPM4-214ENST00000591645 EMILIN2Q9BXX0 1053 aa6.7□□□□□ -1.34
TPM4-214ENST00000591645 ATXN3LQ9H3M9 355 aa6.7□□□□□ -1.34
TPM4-214ENST00000591645 C12orf49Q9H741 205 aa6.7□□□□□ -1.34
TPM4-214ENST00000591645 FAM8A1Q9UBU6 413 aa6.7□□□□□ -1.34
TPM4-214ENST00000591645 WWC3Q9ULE0 1092 aa6.7□□□□□ -1.34
TPM4-214ENST00000591645 LEMD3Q9Y2U8 911 aa6.7□□□□□ -1.34
TPM4-214ENST00000591645 ENC1O14682 589 aa6.69□□□□□ -1.34
TPM4-214ENST00000591645 LDHBP07195 334 aaKnown RBP6.69□□□□□ -1.34
TPM4-214ENST00000591645 NFICP08651 508 aa6.69□□□□□ -1.34
TPM4-214ENST00000591645 FOSL1P15407 271 aa6.69□□□□□ -1.34
TPM4-214ENST00000591645 LIG1P18858 919 aa6.69□□□□□ -1.34
TPM4-214ENST00000591645 ADMP35318 185 aa6.69□□□□□ -1.34
TPM4-214ENST00000591645 FGD1P98174 961 aa6.69□□□□□ -1.34
TPM4-214ENST00000591645 SCARA3Q6AZY7 606 aa6.69□□□□□ -1.34
TPM4-214ENST00000591645 STK35Q8TDR2 534 aa6.69□□□□□ -1.34
TPM4-214ENST00000591645 WDR89Q96FK6 387 aaPredicted RBP6.69□□□□□ -1.34
TPM4-214ENST00000591645 TBC1D32Q96NH3 1257 aa6.69□□□□□ -1.34
TPM4-214ENST00000591645 OSBPL1AQ9BXW6 950 aa6.69□□□□□ -1.34
TPM4-214ENST00000591645 PRPF40AO75400 957 aaKnown RBP6.68□□□□□ -1.34
TPM4-214ENST00000591645 CYP27A1Q02318 531 aa6.68□□□□□ -1.34
TPM4-214ENST00000591645 MSMPQ1L6U9 139 aa6.68□□□□□ -1.34
TPM4-214ENST00000591645 FANCD2OSQ96PS1 177 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms