RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 ZNF215Q9UL58 517 aaPredicted RBP21.46■■□□□ 1.03
DDX39A-206ENST00000587730 TBC1D2BQ9UPU7 963 aa21.46■■□□□ 1.03
DDX39A-206ENST00000587730 SH2B2O14492 632 aaPredicted RBP21.45■■□□□ 1.03
DDX39A-206ENST00000587730 UQCRFS1P1P0C7P4 283 aa21.45■■□□□ 1.03
DDX39A-206ENST00000587730 IL2RBP14784 551 aa21.45■■□□□ 1.03
DDX39A-206ENST00000587730 MYL5Q02045 173 aa21.45■■□□□ 1.03
DDX39A-206ENST00000587730 NCAPHQ15003 741 aa21.45■■□□□ 1.03
DDX39A-206ENST00000587730 ALX1Q15699 326 aa21.45■■□□□ 1.03
DDX39A-206ENST00000587730 OLFM4Q6UX06 510 aa21.45■■□□□ 1.03
DDX39A-206ENST00000587730 TOM1L2Q6ZVM7 507 aa21.45■■□□□ 1.03
DDX39A-206ENST00000587730 CABLES1Q8TDN4 633 aa21.45■■□□□ 1.03
DDX39A-206ENST00000587730 SRRTQ9BXP5 876 aaKnown RBP21.45■■□□□ 1.03
DDX39A-206ENST00000587730 PRDM10Q9NQV6 1147 aa21.45■■□□□ 1.03
DDX39A-206ENST00000587730 FANCCQ00597 558 aa21.45■■□□□ 1.02
DDX39A-206ENST00000587730 METTL24Q5JXM2 366 aa21.45■■□□□ 1.02
DDX39A-206ENST00000587730 SGMS1Q86VZ5 419 aa21.45■■□□□ 1.02
DDX39A-206ENST00000587730 CREBRFQ8IUR6 639 aa21.45■■□□□ 1.02
DDX39A-206ENST00000587730 PPP1R13BQ96KQ4 1090 aa21.45■■□□□ 1.02
DDX39A-206ENST00000587730 CARD10Q9BWT7 1032 aa21.45■■□□□ 1.02
DDX39A-206ENST00000587730 GPHNQ9NQX3 736 aaPredicted RBP21.45■■□□□ 1.02
DDX39A-206ENST00000587730 SPDYE4A6NLX3 237 aa21.44■■□□□ 1.02
DDX39A-206ENST00000587730 E4F1Q66K89 784 aaPredicted RBP21.44■■□□□ 1.02
DDX39A-206ENST00000587730 OTUD7BQ6GQQ9 843 aa21.44■■□□□ 1.02
DDX39A-206ENST00000587730 VPS37DQ86XT2 251 aa21.44■■□□□ 1.02
DDX39A-206ENST00000587730 TRMT1Q9NXH9 659 aaKnown RBP21.44■■□□□ 1.02
DDX39A-206ENST00000587730 PHLPP2Q6ZVD8 1323 aa21.44■■□□□ 1.02
DDX39A-206ENST00000587730 RIC1Q4ADV7 1423 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 KIF28PB7ZC32 967 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 RESP18Q5W5W9 173 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 ARMCX5Q6P1M9 558 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 KRT222Q8N1A0 295 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 RIPOR2Q9Y4F9 1068 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 COL16A1Q07092 1604 aaPredicted RBP21.43■■□□□ 1.02
DDX39A-206ENST00000587730 C4AP0C0L4 1744 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 C4BP0C0L5 1744 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 STARD3NLO95772 234 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 LIFRP42702 1097 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 KRT40Q6A162 431 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 MTA3Q9BTC8 594 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 CNNM2Q9H8M5 875 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 PRDM11Q9NQV5 511 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 DACH1Q9UI36 760 aa21.43■■□□□ 1.02
DDX39A-206ENST00000587730 NID2Q14112 1375 aa21.42■■□□□ 1.02
DDX39A-206ENST00000587730 ANKRD18BA2A2Z9 1011 aa21.42■■□□□ 1.02
DDX39A-206ENST00000587730 GOLGA6L9A6NEM1 432 aa21.42■■□□□ 1.02
DDX39A-206ENST00000587730 ZBTB43O43298 467 aa21.42■■□□□ 1.02
DDX39A-206ENST00000587730 SCARF1Q14162 830 aa21.42■■□□□ 1.02
DDX39A-206ENST00000587730 SLC9C2Q5TAH2 1124 aa21.42■■□□□ 1.02
DDX39A-206ENST00000587730 CCDC102BQ68D86 513 aa21.42■■□□□ 1.02
DDX39A-206ENST00000587730 APOA5Q6Q788 366 aa21.42■■□□□ 1.02
DDX39A-206ENST00000587730 MYH7P12883 1935 aa21.42■■□□□ 1.02
DDX39A-206ENST00000587730 ABCA3Q99758 1704 aa21.41■■□□□ 1.02
DDX39A-206ENST00000587730 IARSP41252 1262 aaKnown RBP21.41■■□□□ 1.02
DDX39A-206ENST00000587730 PTPAQ15257 358 aa21.41■■□□□ 1.02
DDX39A-206ENST00000587730 LDHAL6AQ6ZMR3 332 aa21.41■■□□□ 1.02
DDX39A-206ENST00000587730 COL5A2P05997 1499 aaPredicted RBP21.41■■□□□ 1.02
DDX39A-206ENST00000587730 ZSCAN12O43309 604 aa21.41■■□□□ 1.02
DDX39A-206ENST00000587730 WDHD1O75717 1129 aaPredicted RBP21.41■■□□□ 1.02
DDX39A-206ENST00000587730 TPM1P09493 284 aa21.41■■□□□ 1.02
DDX39A-206ENST00000587730 RCAN1P53805 252 aa21.41■■□□□ 1.02
DDX39A-206ENST00000587730 TMOD3Q9NYL9 352 aa21.41■■□□□ 1.02
DDX39A-206ENST00000587730 ARID4AP29374 1257 aaPredicted RBP21.4■■□□□ 1.02
DDX39A-206ENST00000587730 MCAMP43121 646 aa21.4■■□□□ 1.02
DDX39A-206ENST00000587730 UBASH3AP57075 661 aa21.4■■□□□ 1.02
DDX39A-206ENST00000587730 ETF1P62495 437 aaKnown RBP21.4■■□□□ 1.02
DDX39A-206ENST00000587730 SAFBQ15424 915 aaKnown RBP eCLIP21.4■■□□□ 1.02
DDX39A-206ENST00000587730 TAF3Q5VWG9 929 aa21.4■■□□□ 1.02
DDX39A-206ENST00000587730 GIGYF2Q6Y7W6 1299 aaKnown RBP21.4■■□□□ 1.02
DDX39A-206ENST00000587730 ERCC4Q92889 916 aaPredicted RBP21.4■■□□□ 1.02
DDX39A-206ENST00000587730 FBXW7Q969H0 707 aa21.4■■□□□ 1.02
DDX39A-206ENST00000587730 MAP3K14Q99558 947 aa21.4■■□□□ 1.02
DDX39A-206ENST00000587730 MROH7-TTC4A0A0A0MT08 1334 aa21.4■■□□□ 1.02
DDX39A-206ENST00000587730 BIN1O00499 593 aa21.39■■□□□ 1.02
DDX39A-206ENST00000587730 PPFIA3O75145 1194 aa21.39■■□□□ 1.02
DDX39A-206ENST00000587730 SERPINC1P01008 464 aa21.39■■□□□ 1.02
DDX39A-206ENST00000587730 CCDC93Q567U6 631 aa21.39■■□□□ 1.02
DDX39A-206ENST00000587730 KRT23Q9C075 422 aa21.39■■□□□ 1.02
DDX39A-206ENST00000587730 A0A087WWV3 80 aa21.39■■□□□ 1.01
DDX39A-206ENST00000587730 GOLGA8AA7E2F4 631 aa21.39■■□□□ 1.01
DDX39A-206ENST00000587730 CTSWP56202 376 aa21.39■■□□□ 1.01
DDX39A-206ENST00000587730 NFXL1Q6ZNB6 911 aa21.39■■□□□ 1.01
DDX39A-206ENST00000587730 KRI1Q8N9T8 703 aaKnown RBP21.39■■□□□ 1.01
DDX39A-206ENST00000587730 CCDC34Q96HJ3 373 aa21.39■■□□□ 1.01
DDX39A-206ENST00000587730 AK7Q96M32 723 aa21.39■■□□□ 1.01
DDX39A-206ENST00000587730 CNNM1Q9NRU3 951 aa21.39■■□□□ 1.01
DDX39A-206ENST00000587730 FAM53CQ9NYF3 392 aa21.39■■□□□ 1.01
DDX39A-206ENST00000587730 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.38■■□□□ 1.01
DDX39A-206ENST00000587730 APPP05067 770 aa21.38■■□□□ 1.01
DDX39A-206ENST00000587730 LMOD1P29536 600 aaPredicted RBP21.38■■□□□ 1.01
DDX39A-206ENST00000587730 SSRP1Q08945 709 aaKnown RBP21.38■■□□□ 1.01
DDX39A-206ENST00000587730 KMT5BQ4FZB7 885 aa21.38■■□□□ 1.01
DDX39A-206ENST00000587730 CT47A1Q5JQC4 288 aaPredicted RBP21.38■■□□□ 1.01
DDX39A-206ENST00000587730 KANK3Q6NY19 840 aa21.38■■□□□ 1.01
DDX39A-206ENST00000587730 SHC4Q6S5L8 630 aa21.38■■□□□ 1.01
DDX39A-206ENST00000587730 KRBA2Q6ZNG9 492 aa21.38■■□□□ 1.01
DDX39A-206ENST00000587730 TBC1D10CQ8IV04 446 aa21.38■■□□□ 1.01
DDX39A-206ENST00000587730 VSTM4Q8IW00 320 aa21.38■■□□□ 1.01
DDX39A-206ENST00000587730 TRIML1Q8N9V2 468 aa21.38■■□□□ 1.01
DDX39A-206ENST00000587730 TTLL11Q8NHH1 800 aa21.38■■□□□ 1.01
DDX39A-206ENST00000587730 FAM89AQ96GI7 184 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms