RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 FAM196AQ6ZSG2 479 aa11.74□□□□□ -0.53
CDH8-207ENST00000582242 SULF2Q8IWU5 870 aa11.74□□□□□ -0.53
CDH8-207ENST00000582242 NUDT8Q8WV74 236 aa11.74□□□□□ -0.53
CDH8-207ENST00000582242 SOX17Q9H6I2 414 aaPredicted RBP11.74□□□□□ -0.53
CDH8-207ENST00000582242 CUX2O14529 1486 aa11.74□□□□□ -0.53
CDH8-207ENST00000582242 MAP3K1Q13233 1512 aa11.73□□□□□ -0.53
CDH8-207ENST00000582242 RASIP1Q5U651 963 aa11.73□□□□□ -0.53
CDH8-207ENST00000582242 DNMBPQ6XZF7 1577 aa11.73□□□□□ -0.53
CDH8-207ENST00000582242 DDX54Q8TDD1 881 aaKnown RBP11.73□□□□□ -0.53
CDH8-207ENST00000582242 DCAF5Q96JK2 942 aa11.73□□□□□ -0.53
CDH8-207ENST00000582242 JPH1Q9HDC5 661 aaPredicted RBP11.73□□□□□ -0.53
CDH8-207ENST00000582242 FGD5Q6ZNL6 1462 aa11.72□□□□□ -0.53
CDH8-207ENST00000582242 ROBO2Q9HCK4 1378 aa11.72□□□□□ -0.53
CDH8-207ENST00000582242 CLSPNQ9HAW4 1339 aa11.72□□□□□ -0.53
CDH8-207ENST00000582242 SOX1O00570 391 aaPredicted RBP11.72□□□□□ -0.53
CDH8-207ENST00000582242 ALBP02768 609 aa11.72□□□□□ -0.53
CDH8-207ENST00000582242 LMNB1P20700 586 aa11.72□□□□□ -0.53
CDH8-207ENST00000582242 ARNTP27540 789 aa11.72□□□□□ -0.53
CDH8-207ENST00000582242 RBL2Q08999 1139 aa11.72□□□□□ -0.53
CDH8-207ENST00000582242 LRRC14Q15048 493 aa11.72□□□□□ -0.53
CDH8-207ENST00000582242 DNAJC2Q99543 621 aaKnown RBP11.72□□□□□ -0.53
CDH8-207ENST00000582242 EMILIN2Q9BXX0 1053 aa11.72□□□□□ -0.53
CDH8-207ENST00000582242 LRRC3Q9BY71 257 aa11.72□□□□□ -0.53
CDH8-207ENST00000582242 UBP1Q9NZI7 540 aa11.72□□□□□ -0.53
CDH8-207ENST00000582242 SOX9P48436 509 aa11.71□□□□□ -0.53
CDH8-207ENST00000582242 PLA2G4EQ3MJ16 856 aa11.71□□□□□ -0.53
CDH8-207ENST00000582242 SCARA3Q6AZY7 606 aa11.71□□□□□ -0.53
CDH8-207ENST00000582242 LLGL2Q6P1M3 1020 aa11.71□□□□□ -0.53
CDH8-207ENST00000582242 STK35Q8TDR2 534 aa11.71□□□□□ -0.53
CDH8-207ENST00000582242 MIR1-1HGQ9H1L0 117 aa11.71□□□□□ -0.53
CDH8-207ENST00000582242 GINM1Q9NU53 330 aa11.71□□□□□ -0.53
CDH8-207ENST00000582242 PCDHB5Q9Y5E4 795 aa11.71□□□□□ -0.53
CDH8-207ENST00000582242 EIF4EBP3O60516 100 aaPredicted RBP11.7□□□□□ -0.54
CDH8-207ENST00000582242 CRKP46108 304 aa11.7□□□□□ -0.54
CDH8-207ENST00000582242 BAG6P46379 1132 aa11.7□□□□□ -0.54
CDH8-207ENST00000582242 NASPP49321 788 aaPredicted RBP11.7□□□□□ -0.54
CDH8-207ENST00000582242 ZNF252P-AS1Q0IIN9 211 aa11.7□□□□□ -0.54
CDH8-207ENST00000582242 APOBRQ0VD83 1088 aa11.7□□□□□ -0.54
CDH8-207ENST00000582242 AP3B2Q13367 1082 aa11.7□□□□□ -0.54
CDH8-207ENST00000582242 C1orf229Q6ZS94 237 aaPredicted RBP11.7□□□□□ -0.54
CDH8-207ENST00000582242 IL22RA1Q8N6P7 574 aa11.7□□□□□ -0.54
CDH8-207ENST00000582242 GATAD2BQ8WXI9 593 aa11.7□□□□□ -0.54
CDH8-207ENST00000582242 WNT8BQ93098 351 aa11.7□□□□□ -0.54
CDH8-207ENST00000582242 HIRIP3Q9BW71 556 aaPredicted RBP11.7□□□□□ -0.54
CDH8-207ENST00000582242 STRIP2Q9ULQ0 834 aa11.7□□□□□ -0.54
CDH8-207ENST00000582242 EFR3BQ9Y2G0 817 aa11.7□□□□□ -0.54
CDH8-207ENST00000582242 PPME1Q9Y570 386 aa11.7□□□□□ -0.54
CDH8-207ENST00000582242 CUL7Q14999 1698 aa11.7□□□□□ -0.54
CDH8-207ENST00000582242 ARHGAP35Q9NRY4 1499 aa11.7□□□□□ -0.54
CDH8-207ENST00000582242 F13A1P00488 732 aa11.69□□□□□ -0.54
CDH8-207ENST00000582242 AFF1P51825 1210 aaKnown RBP11.69□□□□□ -0.54
CDH8-207ENST00000582242 PIP4K2BP78356 416 aa11.69□□□□□ -0.54
CDH8-207ENST00000582242 BNC2Q6ZN30 1099 aaPredicted RBP11.69□□□□□ -0.54
CDH8-207ENST00000582242 PDZD3Q86UT5 571 aa11.69□□□□□ -0.54
CDH8-207ENST00000582242 SLITRK4Q8IW52 837 aa11.69□□□□□ -0.54
CDH8-207ENST00000582242 FANCD2Q9BXW9 1451 aa11.69□□□□□ -0.54
CDH8-207ENST00000582242 RRBP1Q9P2E9 1410 aaKnown RBP11.69□□□□□ -0.54
CDH8-207ENST00000582242 FAM221AA4D161 298 aa11.68□□□□□ -0.54
CDH8-207ENST00000582242 LILRB5O75023 590 aa11.68□□□□□ -0.54
CDH8-207ENST00000582242 STK10O94804 968 aaKnown RBP11.68□□□□□ -0.54
CDH8-207ENST00000582242 ITGB2P05107 769 aa11.68□□□□□ -0.54
CDH8-207ENST00000582242 DPH6Q7L8W6 267 aa11.68□□□□□ -0.54
CDH8-207ENST00000582242 EDARADDQ8WWZ3 215 aa11.68□□□□□ -0.54
CDH8-207ENST00000582242 NKD1Q969G9 470 aa11.68□□□□□ -0.54
CDH8-207ENST00000582242 GAL3ST3Q96A11 431 aa11.68□□□□□ -0.54
CDH8-207ENST00000582242 MPP2Q14168 576 aa11.67□□□□□ -0.54
CDH8-207ENST00000582242 DIEXFQ68CQ4 756 aaKnown RBP11.67□□□□□ -0.54
CDH8-207ENST00000582242 CBX8Q9HC52 389 aa11.67□□□□□ -0.54
CDH8-207ENST00000582242 PRDM6Q9NQX0 595 aa11.67□□□□□ -0.54
CDH8-207ENST00000582242 LAMC3Q9Y6N6 1575 aa11.67□□□□□ -0.54
CDH8-207ENST00000582242 SHISA8B8ZZ34 492 aa11.66□□□□□ -0.54
CDH8-207ENST00000582242 M0R082 166 aa11.66□□□□□ -0.54
CDH8-207ENST00000582242 MSTNO14793 375 aa11.66□□□□□ -0.54
CDH8-207ENST00000582242 CILPO75339 1184 aa11.66□□□□□ -0.54
CDH8-207ENST00000582242 SSBP05455 408 aaKnown RBP eCLIP11.66□□□□□ -0.54
CDH8-207ENST00000582242 GSTP1P09211 210 aaKnown RBP11.66□□□□□ -0.54
CDH8-207ENST00000582242 C19orf57Q0VDD7 668 aa11.66□□□□□ -0.54
CDH8-207ENST00000582242 SEPT6Q14141 434 aa11.66□□□□□ -0.54
CDH8-207ENST00000582242 SOGA3Q5TF21 947 aa11.66□□□□□ -0.54
CDH8-207ENST00000582242 FAM117BQ6P1L5 589 aa11.66□□□□□ -0.54
CDH8-207ENST00000582242 CHSY3Q70JA7 882 aa11.66□□□□□ -0.54
CDH8-207ENST00000582242 ZNF417Q8TAU3 575 aa11.66□□□□□ -0.54
CDH8-207ENST00000582242 GRIN3AQ8TCU5 1115 aa11.66□□□□□ -0.54
CDH8-207ENST00000582242 ZNF587Q96SQ5 575 aaPredicted RBP11.66□□□□□ -0.54
CDH8-207ENST00000582242 LNPKQ9C0E8 428 aa11.66□□□□□ -0.54
CDH8-207ENST00000582242 OSGEPQ9NPF4 335 aa11.66□□□□□ -0.54
CDH8-207ENST00000582242 EFCAB5A4FU69 1503 aa11.65□□□□□ -0.54
CDH8-207ENST00000582242 ABCA10Q8WWZ4 1543 aa11.65□□□□□ -0.54
CDH8-207ENST00000582242 CFAP43Q8NDM7 1665 aa11.65□□□□□ -0.54
CDH8-207ENST00000582242 TRIM37O94972 964 aa11.65□□□□□ -0.54
CDH8-207ENST00000582242 ARL4DP49703 201 aa11.65□□□□□ -0.54
CDH8-207ENST00000582242 HGSNATQ68CP4 663 aa11.65□□□□□ -0.54
CDH8-207ENST00000582242 GALNT6Q8NCL4 622 aa11.65□□□□□ -0.54
CDH8-207ENST00000582242 JARID2Q92833 1246 aaPredicted RBP11.65□□□□□ -0.54
CDH8-207ENST00000582242 NRSN2Q9GZP1 204 aa11.65□□□□□ -0.54
CDH8-207ENST00000582242 CACNA2D2Q9NY47 1150 aa11.65□□□□□ -0.54
CDH8-207ENST00000582242 FHAD1B1AJZ9 1412 aa11.65□□□□□ -0.54
CDH8-207ENST00000582242 TIAM1Q13009 1591 aa11.65□□□□□ -0.54
CDH8-207ENST00000582242 CARMIL1Q5VZK9 1371 aa11.65□□□□□ -0.55
CDH8-207ENST00000582242 LINC01387J3KSC0 135 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms