RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 TPTE2Q6XPS3 522 aa18.7■□□□□ 0.58
USP43-204ENST00000573955 MB21D2Q8IYB1 491 aaPredicted RBP18.7■□□□□ 0.58
USP43-204ENST00000573955 NSUN7Q8NE18 718 aaKnown RBP18.7■□□□□ 0.58
USP43-204ENST00000573955 H3BQV1 296 aa18.69■□□□□ 0.58
USP43-204ENST00000573955 ANTXR2P58335 489 aa18.69■□□□□ 0.58
USP43-204ENST00000573955 IFFO2Q5TF58 517 aa18.69■□□□□ 0.58
USP43-204ENST00000573955 AGXT2Q9BYV1 514 aa18.69■□□□□ 0.58
USP43-204ENST00000573955 TFIP11Q9UBB9 837 aaKnown RBP18.69■□□□□ 0.58
USP43-204ENST00000573955 LCORLQ8N3X6 602 aa18.69■□□□□ 0.58
USP43-204ENST00000573955 TAOK2Q9UL54 1235 aa18.69■□□□□ 0.58
USP43-204ENST00000573955 SPDYE4A6NLX3 237 aa18.68■□□□□ 0.58
USP43-204ENST00000573955 MMP14P50281 582 aa18.68■□□□□ 0.58
USP43-204ENST00000573955 RPS8P62241 208 aaKnown RBP18.68■□□□□ 0.58
USP43-204ENST00000573955 RBM6P78332 1123 aaKnown RBP18.68■□□□□ 0.58
USP43-204ENST00000573955 SLC10A5Q5PT55 438 aa18.68■□□□□ 0.58
USP43-204ENST00000573955 EPB41L4AQ9HCS5 686 aaPredicted RBP18.68■□□□□ 0.58
USP43-204ENST00000573955 RGS17Q9UGC6 210 aaPredicted RBP18.68■□□□□ 0.58
USP43-204ENST00000573955 CASZ1Q86V15 1759 aa18.68■□□□□ 0.58
USP43-204ENST00000573955 KLF18A0A0U1RQI7 1052 aa18.68■□□□□ 0.58
USP43-204ENST00000573955 CTDSPL2Q05D32 466 aa18.68■□□□□ 0.58
USP43-204ENST00000573955 TRDNQ13061 729 aa18.68■□□□□ 0.58
USP43-204ENST00000573955 POTEAQ6S8J7 498 aa18.68■□□□□ 0.58
USP43-204ENST00000573955 TMEM87AQ8NBN3 555 aa18.68■□□□□ 0.58
USP43-204ENST00000573955 TFCP2L1Q9NZI6 479 aa18.68■□□□□ 0.58
USP43-204ENST00000573955 RAI14Q9P0K7 980 aa18.68■□□□□ 0.58
USP43-204ENST00000573955 B4E1Z4 1266 aa18.67■□□□□ 0.58
USP43-204ENST00000573955 GUCY1B3Q02153 619 aa18.67■□□□□ 0.58
USP43-204ENST00000573955 NAPBQ9H115 298 aa18.67■□□□□ 0.58
USP43-204ENST00000573955 RBSNQ9H1K0 784 aa18.67■□□□□ 0.58
USP43-204ENST00000573955 TAF1LQ8IZX4 1826 aa18.67■□□□□ 0.58
USP43-204ENST00000573955 APBA3O96018 575 aa18.67■□□□□ 0.58
USP43-204ENST00000573955 CAVIN4Q5BKX8 364 aa18.67■□□□□ 0.58
USP43-204ENST00000573955 ADGRA1Q86SQ6 560 aa18.67■□□□□ 0.58
USP43-204ENST00000573955 JAG2Q9Y219 1238 aa18.67■□□□□ 0.58
USP43-204ENST00000573955 CCDC66A2RUB6 948 aa18.66■□□□□ 0.58
USP43-204ENST00000573955 GOLGA8BA8MQT2 603 aa18.66■□□□□ 0.58
USP43-204ENST00000573955 CLGNO14967 610 aa18.66■□□□□ 0.58
USP43-204ENST00000573955 CYB5R4Q7L1T6 521 aa18.66■□□□□ 0.58
USP43-204ENST00000573955 IFNL3Q8IZI9 196 aa18.66■□□□□ 0.58
USP43-204ENST00000573955 SMARCC2Q8TAQ2 1214 aa18.66■□□□□ 0.58
USP43-204ENST00000573955 NEDD4P46934 1319 aa18.66■□□□□ 0.58
USP43-204ENST00000573955 CYP7A1P22680 504 aa18.66■□□□□ 0.58
USP43-204ENST00000573955 UBE2HP62256 183 aa18.66■□□□□ 0.58
USP43-204ENST00000573955 KRT85P78386 507 aa18.66■□□□□ 0.58
USP43-204ENST00000573955 UBE4AQ14139 1066 aa18.66■□□□□ 0.58
USP43-204ENST00000573955 NFIXQ14938 502 aa18.66■□□□□ 0.58
USP43-204ENST00000573955 SLC4A4Q9Y6R1 1079 aa18.66■□□□□ 0.58
USP43-204ENST00000573955 COL1A1P02452 1464 aaPredicted RBP18.65■□□□□ 0.58
USP43-204ENST00000573955 PATL2C9JE40 543 aaKnown RBP18.65■□□□□ 0.58
USP43-204ENST00000573955 RXRAP19793 462 aa18.65■□□□□ 0.58
USP43-204ENST00000573955 TXNRD1Q16881 649 aa18.65■□□□□ 0.58
USP43-204ENST00000573955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.65■□□□□ 0.58
USP43-204ENST00000573955 TTC6Q86TZ1 520 aa18.65■□□□□ 0.58
USP43-204ENST00000573955 ZNF274Q96GC6 653 aaPredicted RBP18.65■□□□□ 0.58
USP43-204ENST00000573955 FAM84BQ96KN1 310 aaPredicted RBP18.65■□□□□ 0.58
USP43-204ENST00000573955 GNL3LQ9NVN8 582 aaKnown RBP18.65■□□□□ 0.58
USP43-204ENST00000573955 C4BP0C0L5 1744 aa18.65■□□□□ 0.58
USP43-204ENST00000573955 RXRBP28702 533 aa18.65■□□□□ 0.58
USP43-204ENST00000573955 TDO2P48775 406 aa18.65■□□□□ 0.58
USP43-204ENST00000573955 ZNF772Q68DY9 489 aaPredicted RBP18.65■□□□□ 0.58
USP43-204ENST00000573955 LRSAM1Q6UWE0 723 aa18.65■□□□□ 0.58
USP43-204ENST00000573955 RNF214Q8ND24 703 aa18.65■□□□□ 0.58
USP43-204ENST00000573955 GSG1L2A8MUP6 293 aa18.64■□□□□ 0.57
USP43-204ENST00000573955 CNPY4Q8N129 248 aa18.64■□□□□ 0.57
USP43-204ENST00000573955 SYAP1Q96A49 352 aaPredicted RBP18.64■□□□□ 0.57
USP43-204ENST00000573955 SENP2Q9HC62 589 aa18.64■□□□□ 0.57
USP43-204ENST00000573955 TOMM22Q9NS69 142 aa18.64■□□□□ 0.57
USP43-204ENST00000573955 LY75O60449 1722 aa18.64■□□□□ 0.57
USP43-204ENST00000573955 ZNF804BA4D1E1 1349 aa18.64■□□□□ 0.57
USP43-204ENST00000573955 CEBPZQ03701 1054 aaKnown RBP18.64■□□□□ 0.57
USP43-204ENST00000573955 RRP12Q5JTH9 1297 aaKnown RBP18.64■□□□□ 0.57
USP43-204ENST00000573955 SDR42E1Q8WUS8 393 aa18.64■□□□□ 0.57
USP43-204ENST00000573955 LLPHQ9BRT6 129 aaKnown RBP18.64■□□□□ 0.57
USP43-204ENST00000573955 HMGN5P82970 282 aaKnown RBP18.63■□□□□ 0.57
USP43-204ENST00000573955 CHAF1AQ13111 956 aaPredicted RBP18.63■□□□□ 0.57
USP43-204ENST00000573955 PRIMPOLQ96LW4 560 aa18.63■□□□□ 0.57
USP43-204ENST00000573955 TIGD1Q96MW7 591 aa18.63■□□□□ 0.57
USP43-204ENST00000573955 DOCK2Q92608 1830 aa18.63■□□□□ 0.57
USP43-204ENST00000573955 KDM4AO75164 1064 aa18.63■□□□□ 0.57
USP43-204ENST00000573955 ZNF827Q17R98 1081 aa18.63■□□□□ 0.57
USP43-204ENST00000573955 CCDC144CPQ8IYA2 1237 aa18.63■□□□□ 0.57
USP43-204ENST00000573955 TSC1Q92574 1164 aa18.63■□□□□ 0.57
USP43-204ENST00000573955 TACC3Q9Y6A5 838 aa18.63■□□□□ 0.57
USP43-204ENST00000573955 OTUD7BQ6GQQ9 843 aa18.62■□□□□ 0.57
USP43-204ENST00000573955 CNBD1Q8NA66 436 aa18.62■□□□□ 0.57
USP43-204ENST00000573955 PDLIM2Q96JY6 352 aa18.62■□□□□ 0.57
USP43-204ENST00000573955 KCNG1Q9UIX4 513 aa18.62■□□□□ 0.57
USP43-204ENST00000573955 HPS5Q9UPZ3 1129 aa18.62■□□□□ 0.57
USP43-204ENST00000573955 C4AP0C0L4 1744 aa18.62■□□□□ 0.57
USP43-204ENST00000573955 TM4SF1P30408 202 aa18.62■□□□□ 0.57
USP43-204ENST00000573955 RESTQ13127 1097 aa18.62■□□□□ 0.57
USP43-204ENST00000573955 TXNRD3Q86VQ6 643 aa18.62■□□□□ 0.57
USP43-204ENST00000573955 PDCL2Q8N4E4 241 aa18.62■□□□□ 0.57
USP43-204ENST00000573955 GTF2F1P35269 517 aaKnown RBP eCLIP18.61■□□□□ 0.57
USP43-204ENST00000573955 SPATA32Q96LK8 384 aa18.61■□□□□ 0.57
USP43-204ENST00000573955 A0A1B0GUL6 1792 aa18.61■□□□□ 0.57
USP43-204ENST00000573955 SMIM22K7EJ46 135 aa18.61■□□□□ 0.57
USP43-204ENST00000573955 FDPSP14324 419 aaKnown RBP18.61■□□□□ 0.57
USP43-204ENST00000573955 DYNLL1P63167 89 aaKnown RBP18.61■□□□□ 0.57
USP43-204ENST00000573955 ZKSCAN3Q9BRR0 538 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms