RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 TTLL13PA6NNM8 815 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 PRC1O43663 620 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 GIGYF1O75420 1035 aaPredicted RBP9.45□□□□□ -0.9
TCF4-246ENST00000570287 EIF3JO75822 258 aaKnown RBP9.45□□□□□ -0.9
TCF4-246ENST00000570287 MS4A3Q96HJ5 214 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 ESYT1Q9BSJ8 1104 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
TCF4-246ENST00000570287 ERBB3P21860 1342 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 DCCP43146 1447 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 FAM221BA6H8Z2 402 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 SURF6O75683 361 aaKnown RBP9.45□□□□□ -0.9
TCF4-246ENST00000570287 ALDH1L1O75891 902 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 EHHADHQ08426 723 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 LRRC41Q15345 812 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 SULF1Q8IWU6 871 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 TPCN2Q8NHX9 752 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 KIF1BPQ96EK5 621 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 FEZ1Q99689 392 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 EPAS1Q99814 870 aa9.45□□□□□ -0.9
TCF4-246ENST00000570287 METTL5Q9NRN9 209 aaKnown RBP9.45□□□□□ -0.9
TCF4-246ENST00000570287 RGPD5Q99666 1765 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 ABCC6O95255 1503 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 TTC36A6NLP5 189 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 SRGAP3O43295 1099 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 EPB41L2O43491 1005 aaKnown RBP9.44□□□□□ -0.9
TCF4-246ENST00000570287 NBPF7P0C2Y1 421 aaPredicted RBP9.44□□□□□ -0.9
TCF4-246ENST00000570287 MPSTP25325 297 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 CHMLP26374 656 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 USP5P45974 858 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 TSHZ3Q63HK5 1081 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 MRFAP1L1Q96HT8 127 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 KIF3AQ9Y496 699 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 AK9Q5TCS8 1911 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 PLEKHG2Q9H7P9 1386 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 TRIM6-TRIM34B2RNG4 842 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 CTIFO43310 598 aaKnown RBP9.44□□□□□ -0.9
TCF4-246ENST00000570287 IGHA2P01877 340 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 MTX1Q13505 466 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 COL19A1Q14993 1142 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 MCTP1Q6DN14 999 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 RHPN1Q8TCX5 695 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 SRPK1Q96SB4 655 aaKnown RBP9.44□□□□□ -0.9
TCF4-246ENST00000570287 TMEM121BQ9BXQ6 578 aaPredicted RBP9.44□□□□□ -0.9
TCF4-246ENST00000570287 BRINP2Q9C0B6 783 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 HYPKQ9NX55 129 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 MRVI1Q9Y6F6 885 aa9.44□□□□□ -0.9
TCF4-246ENST00000570287 ATF3P18847 181 aa9.43□□□□□ -0.9
TCF4-246ENST00000570287 SYCP2LQ5T4T6 812 aa9.43□□□□□ -0.9
TCF4-246ENST00000570287 KSR2Q6VAB6 950 aa9.43□□□□□ -0.9
TCF4-246ENST00000570287 JARID2Q92833 1246 aaPredicted RBP9.43□□□□□ -0.9
TCF4-246ENST00000570287 RILPL2Q969X0 211 aa9.43□□□□□ -0.9
TCF4-246ENST00000570287 IL17RAQ96F46 866 aa9.43□□□□□ -0.9
TCF4-246ENST00000570287 BCL2L12Q9HB09 334 aa9.43□□□□□ -0.9
TCF4-246ENST00000570287 NEUROD4Q9HD90 331 aa9.43□□□□□ -0.9
TCF4-246ENST00000570287 FANCLQ9NW38 375 aa9.43□□□□□ -0.9
TCF4-246ENST00000570287 SMAPO00193 183 aa9.43□□□□□ -0.9
TCF4-246ENST00000570287 PRPF40AO75400 957 aaKnown RBP9.43□□□□□ -0.9
TCF4-246ENST00000570287 BDNFP23560 247 aa9.43□□□□□ -0.9
TCF4-246ENST00000570287 USP48Q86UV5 1035 aa9.43□□□□□ -0.9
TCF4-246ENST00000570287 IL1RAPL2Q9NP60 686 aa9.43□□□□□ -0.9
TCF4-246ENST00000570287 TMEM63CQ9P1W3 806 aa9.43□□□□□ -0.9
TCF4-246ENST00000570287 BOLA1Q9Y3E2 137 aa9.43□□□□□ -0.9
TCF4-246ENST00000570287 ANXA1P04083 346 aa9.42□□□□□ -0.9
TCF4-246ENST00000570287 MCM2P49736 904 aa9.42□□□□□ -0.9
TCF4-246ENST00000570287 GABPB1Q06547 395 aaPredicted RBP9.42□□□□□ -0.9
TCF4-246ENST00000570287 SERINC3Q13530 473 aa9.42□□□□□ -0.9
TCF4-246ENST00000570287 NOLC1Q14978 699 aaKnown RBP eCLIP9.42□□□□□ -0.9
TCF4-246ENST00000570287 KRBA2Q6ZNG9 492 aa9.42□□□□□ -0.9
TCF4-246ENST00000570287 RAPGEF4Q8WZA2 1011 aa9.42□□□□□ -0.9
TCF4-246ENST00000570287 SRA1Q9HD15 236 aaKnown RBP9.42□□□□□ -0.9
TCF4-246ENST00000570287 FERMT3Q86UX7 667 aa9.42□□□□□ -0.9
TCF4-246ENST00000570287 JAMLQ86YT9 394 aa9.42□□□□□ -0.9
TCF4-246ENST00000570287 NKX2-3Q8TAU0 364 aa9.42□□□□□ -0.9
TCF4-246ENST00000570287 MTA3Q9BTC8 594 aa9.42□□□□□ -0.9
TCF4-246ENST00000570287 DNAAF2Q9NVR5 837 aaKnown RBP9.42□□□□□ -0.9
TCF4-246ENST00000570287 MAP3K2Q9Y2U5 619 aa9.42□□□□□ -0.9
TCF4-246ENST00000570287 SCN11AQ9UI33 1791 aa9.42□□□□□ -0.9
TCF4-246ENST00000570287 TMEM94Q12767 1356 aa9.42□□□□□ -0.9
TCF4-246ENST00000570287 USP42Q9H9J4 1324 aaKnown RBP9.42□□□□□ -0.9
TCF4-246ENST00000570287 ENPP3O14638 875 aa9.42□□□□□ -0.9
TCF4-246ENST00000570287 DDX21Q9NR30 783 aaKnown RBP eCLIP9.42□□□□□ -0.9
TCF4-246ENST00000570287 ZBBXA8MT70 800 aa9.41□□□□□ -0.9
TCF4-246ENST00000570287 DDX58O95786 925 aaKnown RBP9.41□□□□□ -0.9
TCF4-246ENST00000570287 TATP17735 454 aaPredicted RBP9.41□□□□□ -0.9
TCF4-246ENST00000570287 GYS2P54840 703 aa9.41□□□□□ -0.9
TCF4-246ENST00000570287 RNF135Q8IUD6 432 aa9.41□□□□□ -0.9
TCF4-246ENST00000570287 PDCL2Q8N4E4 241 aa9.41□□□□□ -0.9
TCF4-246ENST00000570287 PI4K2BQ8TCG2 481 aa9.41□□□□□ -0.9
TCF4-246ENST00000570287 C9orf78Q9NZ63 289 aaPredicted RBP9.41□□□□□ -0.9
TCF4-246ENST00000570287 COL18A1P39060 1754 aa9.41□□□□□ -0.9
TCF4-246ENST00000570287 NPHP3Q7Z494 1330 aa9.41□□□□□ -0.9
TCF4-246ENST00000570287 CRYBG1Q9Y4K1 1723 aa9.41□□□□□ -0.9
TCF4-246ENST00000570287 PRKAR2AP13861 404 aaKnown RBP9.41□□□□□ -0.9
TCF4-246ENST00000570287 ATF4P18848 351 aaPredicted RBP9.41□□□□□ -0.9
TCF4-246ENST00000570287 DSC3Q14574 896 aa9.41□□□□□ -0.9
TCF4-246ENST00000570287 SYCP1Q15431 976 aa9.41□□□□□ -0.9
TCF4-246ENST00000570287 PROSER3Q2NL68 480 aa9.41□□□□□ -0.9
TCF4-246ENST00000570287 UNC5CLQ8IV45 518 aa9.41□□□□□ -0.9
TCF4-246ENST00000570287 ZNF408Q9H9D4 720 aa9.41□□□□□ -0.9
TCF4-246ENST00000570287 CYLDQ9NQC7 956 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms