RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 NOS2P35228 1153 aa7.82□□□□□ -1.16
CDH13-211ENST00000568770 NCAPD2Q15021 1401 aa7.82□□□□□ -1.16
CDH13-211ENST00000568770 C2orf49Q9BVC5 232 aaPredicted RBP7.82□□□□□ -1.16
CDH13-211ENST00000568770 RNF181Q9P0P0 153 aa7.82□□□□□ -1.16
CDH13-211ENST00000568770 PIM2Q9P1W9 311 aa7.82□□□□□ -1.16
CDH13-211ENST00000568770 KDRP35968 1356 aa7.82□□□□□ -1.16
CDH13-211ENST00000568770 DICER1Q9UPY3 1922 aaKnown RBP7.82□□□□□ -1.16
CDH13-211ENST00000568770 EML1O00423 815 aa7.81□□□□□ -1.16
CDH13-211ENST00000568770 PDIA4P13667 645 aaKnown RBP7.81□□□□□ -1.16
CDH13-211ENST00000568770 RFC4P35249 363 aa7.81□□□□□ -1.16
CDH13-211ENST00000568770 TEAD4Q15561 434 aa7.81□□□□□ -1.16
CDH13-211ENST00000568770 DALRD3Q5D0E6 543 aaKnown RBP7.81□□□□□ -1.16
CDH13-211ENST00000568770 SMC1BQ8NDV3 1235 aa7.81□□□□□ -1.16
CDH13-211ENST00000568770 DCAF5Q96JK2 942 aa7.81□□□□□ -1.16
CDH13-211ENST00000568770 MKNK1Q9BUB5 465 aa7.81□□□□□ -1.16
CDH13-211ENST00000568770 NIFKQ9BYG3 293 aaKnown RBP7.81□□□□□ -1.16
CDH13-211ENST00000568770 SENP2Q9HC62 589 aa7.81□□□□□ -1.16
CDH13-211ENST00000568770 HCN4Q9Y3Q4 1203 aa7.81□□□□□ -1.16
CDH13-211ENST00000568770 TJP1Q07157 1748 aa7.81□□□□□ -1.16
CDH13-211ENST00000568770 ADAMTS7Q9UKP4 1686 aa7.8□□□□□ -1.16
CDH13-211ENST00000568770 PPM1GO15355 546 aaPredicted RBP7.8□□□□□ -1.16
CDH13-211ENST00000568770 HSPA1AP0DMV8 641 aaKnown RBP7.8□□□□□ -1.16
CDH13-211ENST00000568770 HSPA1BP0DMV9 641 aaKnown RBP7.8□□□□□ -1.16
CDH13-211ENST00000568770 PHKG2P15735 406 aa7.8□□□□□ -1.16
CDH13-211ENST00000568770 TXLNAP40222 546 aa7.8□□□□□ -1.16
CDH13-211ENST00000568770 PLA2G4AP47712 749 aa7.8□□□□□ -1.16
CDH13-211ENST00000568770 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.8□□□□□ -1.16
CDH13-211ENST00000568770 GNASQ5JWF2 1037 aa7.8□□□□□ -1.16
CDH13-211ENST00000568770 TAS1R3Q7RTX0 852 aa7.8□□□□□ -1.16
CDH13-211ENST00000568770 IFNL2Q8IZJ0 200 aa7.8□□□□□ -1.16
CDH13-211ENST00000568770 TONSLQ96HA7 1378 aa7.8□□□□□ -1.16
CDH13-211ENST00000568770 CNTNAP4Q9C0A0 1308 aa7.79□□□□□ -1.16
CDH13-211ENST00000568770 CACNA1SQ13698 1873 aa7.79□□□□□ -1.16
CDH13-211ENST00000568770 SERTM1A2A2V5 107 aa7.79□□□□□ -1.16
CDH13-211ENST00000568770 RPS6KA4O75676 772 aa7.79□□□□□ -1.16
CDH13-211ENST00000568770 CHRNA5P30532 468 aa7.79□□□□□ -1.16
CDH13-211ENST00000568770 PSMA6P60900 246 aaKnown RBP7.79□□□□□ -1.16
CDH13-211ENST00000568770 PTSQ03393 145 aa7.79□□□□□ -1.16
CDH13-211ENST00000568770 C7orf43Q8WVR3 580 aa7.79□□□□□ -1.16
CDH13-211ENST00000568770 KIFC2Q96AC6 838 aa7.79□□□□□ -1.16
CDH13-211ENST00000568770 SEPT3Q9UH03 358 aa7.79□□□□□ -1.16
CDH13-211ENST00000568770 SCN11AQ9UI33 1791 aa7.79□□□□□ -1.16
CDH13-211ENST00000568770 NRXN2Q9P2S2 1712 aa7.78□□□□□ -1.16
CDH13-211ENST00000568770 GTF2E1P29083 439 aaPredicted RBP7.78□□□□□ -1.16
CDH13-211ENST00000568770 RASSF7Q02833 373 aa7.78□□□□□ -1.16
CDH13-211ENST00000568770 STAG2Q8N3U4 1231 aa7.78□□□□□ -1.16
CDH13-211ENST00000568770 AIDAQ96BJ3 306 aa7.78□□□□□ -1.16
CDH13-211ENST00000568770 TIMMDC1Q9NPL8 285 aa7.78□□□□□ -1.16
CDH13-211ENST00000568770 SRP68Q9UHB9 627 aaKnown RBP7.78□□□□□ -1.16
CDH13-211ENST00000568770 ZNF232Q9UNY5 417 aa7.78□□□□□ -1.16
CDH13-211ENST00000568770 KDM6AO15550 1401 aaPredicted RBP7.78□□□□□ -1.16
CDH13-211ENST00000568770 WASHC2AQ641Q2 1341 aa7.78□□□□□ -1.16
CDH13-211ENST00000568770 FER1L6Q2WGJ9 1857 aa7.77□□□□□ -1.17
CDH13-211ENST00000568770 SLC35F4A4IF30 521 aa7.77□□□□□ -1.17
CDH13-211ENST00000568770 ERVV-2B6SEH9 535 aa7.77□□□□□ -1.17
CDH13-211ENST00000568770 VEGFAP15692 232 aaPredicted RBP7.77□□□□□ -1.17
CDH13-211ENST00000568770 DDR1Q08345 913 aa7.77□□□□□ -1.17
CDH13-211ENST00000568770 PDE4CQ08493 712 aa7.77□□□□□ -1.17
CDH13-211ENST00000568770 NAA30Q147X3 362 aaPredicted RBP7.77□□□□□ -1.17
CDH13-211ENST00000568770 WDR44Q5JSH3 913 aa7.77□□□□□ -1.17
CDH13-211ENST00000568770 C1orf216Q8TAB5 229 aa7.77□□□□□ -1.17
CDH13-211ENST00000568770 SAP130Q9H0E3 1048 aa7.77□□□□□ -1.17
CDH13-211ENST00000568770 USP42Q9H9J4 1324 aaKnown RBP7.77□□□□□ -1.17
CDH13-211ENST00000568770 GLTPD2A6NH11 291 aa7.76□□□□□ -1.17
CDH13-211ENST00000568770 BRD1O95696 1058 aa7.76□□□□□ -1.17
CDH13-211ENST00000568770 MSX1P28360 303 aa7.76□□□□□ -1.17
CDH13-211ENST00000568770 CRKLP46109 303 aaKnown RBP7.76□□□□□ -1.17
CDH13-211ENST00000568770 ANKRD31Q8N7Z5 1873 aa7.76□□□□□ -1.17
CDH13-211ENST00000568770 POLRMTO00411 1230 aaKnown RBP7.75□□□□□ -1.17
CDH13-211ENST00000568770 PTCD1O75127 700 aaKnown RBP7.75□□□□□ -1.17
CDH13-211ENST00000568770 ATP4AP20648 1035 aa7.75□□□□□ -1.17
CDH13-211ENST00000568770 LMNB1P20700 586 aa7.75□□□□□ -1.17
CDH13-211ENST00000568770 HIRAP54198 1017 aaPredicted RBP7.75□□□□□ -1.17
CDH13-211ENST00000568770 ALDH16A1Q8IZ83 802 aa7.75□□□□□ -1.17
CDH13-211ENST00000568770 PHACTR1Q9C0D0 580 aa7.75□□□□□ -1.17
CDH13-211ENST00000568770 CUEDC1Q9NWM3 386 aaPredicted RBP7.75□□□□□ -1.17
CDH13-211ENST00000568770 LRFN2Q9ULH4 789 aa7.75□□□□□ -1.17
CDH13-211ENST00000568770 TNRC18O15417 2968 aaPredicted RBP7.74□□□□□ -1.17
CDH13-211ENST00000568770 THBS1P07996 1170 aa7.74□□□□□ -1.17
CDH13-211ENST00000568770 HSP90AB1P08238 724 aaKnown RBP7.74□□□□□ -1.17
CDH13-211ENST00000568770 TM4SF1P30408 202 aa7.74□□□□□ -1.17
CDH13-211ENST00000568770 CABP4P57796 275 aa7.74□□□□□ -1.17
CDH13-211ENST00000568770 EIF4A2Q14240 407 aaKnown RBP7.74□□□□□ -1.17
CDH13-211ENST00000568770 COX20Q5RI15 118 aa7.74□□□□□ -1.17
CDH13-211ENST00000568770 ZNF787Q6DD87 383 aa7.74□□□□□ -1.17
CDH13-211ENST00000568770 AEBP1Q8IUX7 1158 aa7.74□□□□□ -1.17
CDH13-211ENST00000568770 CCDC155Q8N6L0 562 aa7.74□□□□□ -1.17
CDH13-211ENST00000568770 GAS2L1Q99501 681 aaPredicted RBP7.74□□□□□ -1.17
CDH13-211ENST00000568770 GPAMQ9HCL2 828 aa7.74□□□□□ -1.17
CDH13-211ENST00000568770 POLKQ9UBT6 870 aa7.74□□□□□ -1.17
CDH13-211ENST00000568770 DYRK1BQ9Y463 629 aa7.74□□□□□ -1.17
CDH13-211ENST00000568770 COL11A2P13942 1736 aaPredicted RBP7.74□□□□□ -1.17
CDH13-211ENST00000568770 SCN4AP35499 1836 aa7.73□□□□□ -1.17
CDH13-211ENST00000568770 SERPINB4P48594 390 aa7.73□□□□□ -1.17
CDH13-211ENST00000568770 FAM26DQ5JW98 314 aa7.73□□□□□ -1.17
CDH13-211ENST00000568770 USPL1Q5W0Q7 1092 aa7.73□□□□□ -1.17
CDH13-211ENST00000568770 INTS5Q6P9B9 1019 aaKnown RBP7.73□□□□□ -1.17
CDH13-211ENST00000568770 RUBCNLQ9H714 662 aa7.73□□□□□ -1.17
CDH13-211ENST00000568770 ARFGEF2Q9Y6D5 1785 aa7.72□□□□□ -1.17
CDH13-211ENST00000568770 A0A1B0GTH6 734 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms