RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 POGZQ7Z3K3 1410 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 MYOM2P54296 1465 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 VIRMAQ69YN4 1812 aaKnown RBP12.38□□□□□ -0.43
PALB2-206ENST00000568219 hCG_1642624A0A1W2PR95 340 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 STX10O60499 249 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 TRIM21P19474 475 aaKnown RBP12.38□□□□□ -0.43
PALB2-206ENST00000568219 CMA1P23946 247 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 UBXN1Q04323 297 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 SPA17Q15506 151 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 FOXR1Q6PIV2 292 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 SND1Q7KZF4 910 aaKnown RBP eCLIP12.38□□□□□ -0.43
PALB2-206ENST00000568219 SCLT1Q96NL6 688 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 TANGO6Q9C0B7 1094 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 PARP3Q9Y6F1 533 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 CAPN7Q9Y6W3 813 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 TCHHQ07283 1943 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 ATP8B1O43520 1251 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 TFRCP02786 760 aaKnown RBP12.37□□□□□ -0.43
PALB2-206ENST00000568219 VSTM4Q8IW00 320 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 RIN2Q8WYP3 895 aaPredicted RBP12.37□□□□□ -0.43
PALB2-206ENST00000568219 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.37□□□□□ -0.43
PALB2-206ENST00000568219 SALL3Q9BXA9 1300 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 ARHGEF40Q8TER5 1519 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 GOLGA6L7A0A1B0GV03 622 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 CASP14P31944 242 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 CCDC96Q2M329 555 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 KBTBD3Q8NAB2 608 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 PLIN2Q99541 437 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 CABP5Q9NP86 173 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 TAB2Q9NYJ8 693 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 B4E1Z4 1266 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 FOXN1O15353 648 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 HSPD1P10809 573 aaKnown RBP12.37□□□□□ -0.43
PALB2-206ENST00000568219 POSTNQ15063 836 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 KCTD16Q68DU8 428 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 BANK1Q8NDB2 785 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 BRMS1Q9HCU9 246 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 AMOTL2Q9Y2J4 779 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 GOLGA6BA6NDN3 693 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 MARCH6O60337 910 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 MAGEA9P43362 315 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 NAPBQ9H115 298 aa12.37□□□□□ -0.43
PALB2-206ENST00000568219 LAMC1P11047 1609 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 FLT4P35916 1363 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 MYO5CQ9NQX4 1742 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 H3BQF6 201 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 RNF113AO15541 343 aaKnown RBP12.36□□□□□ -0.43
PALB2-206ENST00000568219 MCM3P25205 808 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 GSPT2Q8IYD1 628 aaKnown RBP12.36□□□□□ -0.43
PALB2-206ENST00000568219 ADCY9O60503 1353 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 HOXC9P31274 260 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 HPDP32754 393 aaPredicted RBP12.36□□□□□ -0.43
PALB2-206ENST00000568219 PAFAH1B1P43034 410 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 RBL2Q08999 1139 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 FAM69CQ0P6D2 419 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 GNL3LQ9NVN8 582 aaKnown RBP12.36□□□□□ -0.43
PALB2-206ENST00000568219 CARMIL3Q8ND23 1372 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 A0A0G2JLW4 131 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 CASP1P29466 404 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 NF2P35240 595 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 GNGT1P63211 74 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 METTL24Q5JXM2 366 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 IQCEQ6IPM2 695 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 TAX1BP1Q86VP1 789 aa12.36□□□□□ -0.43
PALB2-206ENST00000568219 MAP3K4Q9Y6R4 1608 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 A0A1W2PQ27 194 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 A0A1W2PQ64 194 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 A0A1W2PQD8 194 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 FRMD3A2A2Y4 597 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 SLC9C2Q5TAH2 1124 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 JPH2Q9BR39 696 aaPredicted RBP12.35□□□□□ -0.43
PALB2-206ENST00000568219 BTBD18B2RXH4 712 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 HSF2BPO75031 334 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 ZPR1O75312 459 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 ATP5JP18859 108 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 VSNL1P62760 191 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 ATP2B2Q01814 1243 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 CNGA4Q8IV77 575 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 MYO6Q9UM54 1294 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 VWA3AA6NCI4 1184 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 MYO1BO43795 1136 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 SRGAP2O75044 1071 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 IDEP14735 1019 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 NFATC2IPQ8NCF5 419 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 CCDC47Q96A33 483 aaKnown RBP12.35□□□□□ -0.43
PALB2-206ENST00000568219 FUT8Q9BYC5 575 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 BLZF1Q9H2G9 400 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 CTNND2Q9UQB3 1225 aa12.35□□□□□ -0.43
PALB2-206ENST00000568219 ATP7AQ04656 1500 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 STOX1Q6ZVD7 989 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 ANKRD18AQ8IVF6 992 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 DIS3L2Q8IYB7 885 aaKnown RBP12.34□□□□□ -0.43
PALB2-206ENST00000568219 FAM71BQ8TC56 605 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 CEP131Q9UPN4 1083 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 ANKRD24Q8TF21 1146 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 CCDC114Q96M63 670 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 LUC7L2Q9Y383 392 aaKnown RBP12.34□□□□□ -0.43
PALB2-206ENST00000568219 ABCA6Q8N139 1617 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 IKBKBO14920 756 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 AKR1B10O60218 316 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms