RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 PAPPAQ13219 1627 aa17.92■□□□□ 0.46
GTF3C1-205ENST00000564747 COL5A2P05997 1499 aaPredicted RBP17.92■□□□□ 0.46
GTF3C1-205ENST00000564747 SYKP43405 635 aa17.91■□□□□ 0.46
GTF3C1-205ENST00000564747 SYTL4Q96C24 671 aaPredicted RBP17.91■□□□□ 0.46
GTF3C1-205ENST00000564747 ZNF532Q9HCE3 1301 aa17.91■□□□□ 0.46
GTF3C1-205ENST00000564747 SHC4Q6S5L8 630 aa17.91■□□□□ 0.46
GTF3C1-205ENST00000564747 GIGYF2Q6Y7W6 1299 aaKnown RBP17.91■□□□□ 0.46
GTF3C1-205ENST00000564747 KCND1Q9NSA2 647 aa17.91■□□□□ 0.46
GTF3C1-205ENST00000564747 AKAP11Q9UKA4 1901 aa17.91■□□□□ 0.46
GTF3C1-205ENST00000564747 UBE2Q2LH0YL09 131 aa17.91■□□□□ 0.46
GTF3C1-205ENST00000564747 ATP1A3P13637 1013 aa17.91■□□□□ 0.46
GTF3C1-205ENST00000564747 NLRP10Q86W26 655 aa17.91■□□□□ 0.46
GTF3C1-205ENST00000564747 KIF18AQ8NI77 898 aa17.91■□□□□ 0.46
GTF3C1-205ENST00000564747 PIGBQ92521 554 aa17.91■□□□□ 0.46
GTF3C1-205ENST00000564747 MYL10Q9BUA6 226 aa17.91■□□□□ 0.46
GTF3C1-205ENST00000564747 CGNQ9P2M7 1197 aaKnown RBP17.91■□□□□ 0.46
GTF3C1-205ENST00000564747 PHKA1P46020 1223 aa17.9■□□□□ 0.46
GTF3C1-205ENST00000564747 VGLL2Q8N8G2 317 aa17.9■□□□□ 0.46
GTF3C1-205ENST00000564747 CLIC6Q96NY7 704 aa17.9■□□□□ 0.46
GTF3C1-205ENST00000564747 HSD3B7Q9H2F3 369 aa17.9■□□□□ 0.46
GTF3C1-205ENST00000564747 WWC3Q9ULE0 1092 aa17.9■□□□□ 0.46
GTF3C1-205ENST00000564747 MYH7P12883 1935 aa17.9■□□□□ 0.46
GTF3C1-205ENST00000564747 MAP3K15Q6ZN16 1313 aa17.9■□□□□ 0.46
GTF3C1-205ENST00000564747 C4AP0C0L4 1744 aa17.9■□□□□ 0.46
GTF3C1-205ENST00000564747 C4BP0C0L5 1744 aa17.9■□□□□ 0.46
GTF3C1-205ENST00000564747 DDX60Q8IY21 1712 aaKnown RBP17.9■□□□□ 0.46
GTF3C1-205ENST00000564747 ANKRD18BA2A2Z9 1011 aa17.9■□□□□ 0.46
GTF3C1-205ENST00000564747 GNL2Q13823 731 aaKnown RBP17.9■□□□□ 0.46
GTF3C1-205ENST00000564747 PTPAQ15257 358 aa17.9■□□□□ 0.46
GTF3C1-205ENST00000564747 SFPQP23246 707 aaKnown RBP eCLIP17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 CTSWP56202 376 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 TPM4P67936 248 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 FANCCQ00597 558 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 PNOCQ13519 176 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 IGDCC4Q8TDY8 1250 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 HPSEQ9Y251 543 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 CDKL5O76039 1030 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 PDE6AP16499 860 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 TTF1Q15361 905 aaPredicted RBP17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 UBE3CQ15386 1083 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 NTRK3Q16288 839 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 CCDC102BQ68D86 513 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 CCDC150Q8NCX0 1101 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 TIGD1Q96MW7 591 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 MAP3K14Q99558 947 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 OGFRQ9NZT2 677 aa17.89■□□□□ 0.45
GTF3C1-205ENST00000564747 MYO5AQ9Y4I1 1855 aaKnown RBP17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 RANBP6O60518 1105 aaKnown RBP17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 PDE8BO95263 885 aa17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 STARD3NLO95772 234 aa17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 EVA1CP58658 441 aa17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 NFXL1Q6ZNB6 911 aa17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 HELBQ8NG08 1087 aaPredicted RBP17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 ZNF512BQ96KM6 892 aaPredicted RBP17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 PPP1R13BQ96KQ4 1090 aa17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 FAM217BQ9NTX9 383 aaPredicted RBP17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 TUBE1Q9UJT0 475 aa17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 CDHR2Q9BYE9 1310 aa17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 IRS4O14654 1257 aaPredicted RBP17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 ZBTB43O43298 467 aa17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 PPP6R2O75170 966 aa17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 TEX13AQ9BXU3 409 aaPredicted RBP17.88■□□□□ 0.45
GTF3C1-205ENST00000564747 IKBKBO14920 756 aa17.87■□□□□ 0.45
GTF3C1-205ENST00000564747 IARSP41252 1262 aaKnown RBP17.87■□□□□ 0.45
GTF3C1-205ENST00000564747 CPLX2Q6PUV4 134 aaKnown RBP17.87■□□□□ 0.45
GTF3C1-205ENST00000564747 STRBPQ96SI9 672 aaKnown RBP17.87■□□□□ 0.45
GTF3C1-205ENST00000564747 LY9Q9HBG7 655 aa17.87■□□□□ 0.45
GTF3C1-205ENST00000564747 TCRBV5S4A2TA0A5A2 114 aa17.87■□□□□ 0.45
GTF3C1-205ENST00000564747 DPF2Q92785 391 aa17.87■□□□□ 0.45
GTF3C1-205ENST00000564747 TRMT112Q9UI30 125 aaKnown RBP17.87■□□□□ 0.45
GTF3C1-205ENST00000564747 LONRF3Q496Y0 759 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 TMEM67Q5HYA8 995 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 AIDAQ96BJ3 306 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 TMEM87BQ96K49 555 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 SHANK3Q9BYB0 1731 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 UBN2Q6ZU65 1347 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 GOLGA8AA7E2F4 631 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 CTDSPL2Q05D32 466 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 KMT5BQ4FZB7 885 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 RESP18Q5W5W9 173 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 SYT10Q6XYQ8 523 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 FOXP4Q8IVH2 680 aaPredicted RBP17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 JMYQ8N9B5 988 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 ZSWIM5Q9P217 1185 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 DDX41Q9UJV9 622 aaKnown RBP17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 TBC1D2BQ9UPU7 963 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 ATRNO75882 1429 aa17.86■□□□□ 0.45
GTF3C1-205ENST00000564747 IGSF3O75054 1194 aa17.85■□□□□ 0.45
GTF3C1-205ENST00000564747 ELF2Q15723 593 aa17.85■□□□□ 0.45
GTF3C1-205ENST00000564747 PTPN21Q16825 1174 aa17.85■□□□□ 0.45
GTF3C1-205ENST00000564747 RGS22Q8NE09 1264 aa17.85■□□□□ 0.45
GTF3C1-205ENST00000564747 ERO1AQ96HE7 468 aa17.85■□□□□ 0.45
GTF3C1-205ENST00000564747 TACC3Q9Y6A5 838 aa17.85■□□□□ 0.45
GTF3C1-205ENST00000564747 KIF2AO00139 706 aaPredicted RBP17.85■□□□□ 0.45
GTF3C1-205ENST00000564747 SNAP23O00161 211 aa17.85■□□□□ 0.45
GTF3C1-205ENST00000564747 NPHP1O15259 732 aa17.85■□□□□ 0.45
GTF3C1-205ENST00000564747 SLU7O95391 586 aaKnown RBP17.85■□□□□ 0.45
GTF3C1-205ENST00000564747 UBASH3AP57075 661 aa17.85■□□□□ 0.45
GTF3C1-205ENST00000564747 METTL16Q86W50 562 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms