RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 AK9Q5TCS8 1911 aa16.34■□□□□ 0.21
CDH1-204ENST00000562118 THSD7BQ9C0I4 1608 aa16.34■□□□□ 0.21
CDH1-204ENST00000562118 SIPA1L1O43166 1804 aa16.33■□□□□ 0.21
CDH1-204ENST00000562118 OTOFQ9HC10 1997 aa16.33■□□□□ 0.21
CDH1-204ENST00000562118 ADM5C9JUS6 153 aa16.33■□□□□ 0.2
CDH1-204ENST00000562118 HSPA6P17066 643 aa16.33■□□□□ 0.2
CDH1-204ENST00000562118 APLP1P51693 650 aa16.33■□□□□ 0.2
CDH1-204ENST00000562118 CST9Q5W186 159 aa16.33■□□□□ 0.2
CDH1-204ENST00000562118 CDC42EP5Q6NZY7 148 aa16.33■□□□□ 0.2
CDH1-204ENST00000562118 TICAM2Q86XR7 235 aa16.33■□□□□ 0.2
CDH1-204ENST00000562118 PLEKHM2Q8IWE5 1019 aa16.33■□□□□ 0.2
CDH1-204ENST00000562118 SULF1Q8IWU6 871 aa16.33■□□□□ 0.2
CDH1-204ENST00000562118 EDC3Q96F86 508 aaKnown RBP16.33■□□□□ 0.2
CDH1-204ENST00000562118 TDRD3Q9H7E2 651 aaKnown RBP16.33■□□□□ 0.2
CDH1-204ENST00000562118 GOLIM4O00461 696 aa16.32■□□□□ 0.2
CDH1-204ENST00000562118 TRAF5O00463 557 aa16.32■□□□□ 0.2
CDH1-204ENST00000562118 ERC2O15083 957 aa16.32■□□□□ 0.2
CDH1-204ENST00000562118 LDHCP07864 332 aa16.32■□□□□ 0.2
CDH1-204ENST00000562118 PDE4AP27815 886 aa16.32■□□□□ 0.2
CDH1-204ENST00000562118 MAP3K12Q12852 859 aa16.32■□□□□ 0.2
CDH1-204ENST00000562118 TSHZ3Q63HK5 1081 aa16.32■□□□□ 0.2
CDH1-204ENST00000562118 NAA16Q6N069 864 aaPredicted RBP16.32■□□□□ 0.2
CDH1-204ENST00000562118 USP48Q86UV5 1035 aa16.32■□□□□ 0.2
CDH1-204ENST00000562118 TEPSINQ96N21 525 aa16.32■□□□□ 0.2
CDH1-204ENST00000562118 RAI14Q9P0K7 980 aa16.32■□□□□ 0.2
CDH1-204ENST00000562118 ATRNL1Q5VV63 1379 aa16.31■□□□□ 0.2
CDH1-204ENST00000562118 CLRN2A0PK11 232 aa16.31■□□□□ 0.2
CDH1-204ENST00000562118 WDHD1O75717 1129 aaPredicted RBP16.31■□□□□ 0.2
CDH1-204ENST00000562118 PDE6AP16499 860 aa16.31■□□□□ 0.2
CDH1-204ENST00000562118 BTDP43251 543 aa16.31■□□□□ 0.2
CDH1-204ENST00000562118 RBM5P52756 815 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDH1-204ENST00000562118 FMR1Q06787 632 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDH1-204ENST00000562118 TNFAIP1Q13829 316 aa16.31■□□□□ 0.2
CDH1-204ENST00000562118 CENPQQ7L2Z9 268 aaPredicted RBP16.31■□□□□ 0.2
CDH1-204ENST00000562118 KBTBD3Q8NAB2 608 aa16.31■□□□□ 0.2
CDH1-204ENST00000562118 CDCA5Q96FF9 252 aa16.31■□□□□ 0.2
CDH1-204ENST00000562118 DNAJC2Q99543 621 aaKnown RBP16.31■□□□□ 0.2
CDH1-204ENST00000562118 DEFB129Q9H1M3 183 aa16.31■□□□□ 0.2
CDH1-204ENST00000562118 CREBZFQ9NS37 354 aa16.31■□□□□ 0.2
CDH1-204ENST00000562118 ADD2P35612 726 aa16.3■□□□□ 0.2
CDH1-204ENST00000562118 UBE3CQ15386 1083 aa16.3■□□□□ 0.2
CDH1-204ENST00000562118 B4GALNT3Q6L9W6 998 aa16.3■□□□□ 0.2
CDH1-204ENST00000562118 DLK2Q6UY11 383 aa16.3■□□□□ 0.2
CDH1-204ENST00000562118 CERS3Q8IU89 383 aa16.3■□□□□ 0.2
CDH1-204ENST00000562118 RIOK1Q9BRS2 568 aaKnown RBP16.3■□□□□ 0.2
CDH1-204ENST00000562118 FAM198AQ9UFP1 575 aa16.3■□□□□ 0.2
CDH1-204ENST00000562118 NAV1Q8NEY1 1877 aa16.3■□□□□ 0.2
CDH1-204ENST00000562118 IDH1O75874 414 aaKnown RBP16.29■□□□□ 0.2
CDH1-204ENST00000562118 NFIAQ12857 509 aa16.29■□□□□ 0.2
CDH1-204ENST00000562118 RASA3Q14644 834 aa16.29■□□□□ 0.2
CDH1-204ENST00000562118 MAGEB6Q8N7X4 407 aa16.29■□□□□ 0.2
CDH1-204ENST00000562118 ZBTB47Q9UFB7 747 aaPredicted RBP16.29■□□□□ 0.2
CDH1-204ENST00000562118 MYH1P12882 1939 aa16.29■□□□□ 0.2
CDH1-204ENST00000562118 TMEM88BA6NKF7 163 aa16.28■□□□□ 0.2
CDH1-204ENST00000562118 ENTPD3O75355 529 aa16.28■□□□□ 0.2
CDH1-204ENST00000562118 NEFLP07196 543 aa16.28■□□□□ 0.2
CDH1-204ENST00000562118 FKBP1BP68106 108 aa16.28■□□□□ 0.2
CDH1-204ENST00000562118 MAP3K11Q16584 847 aa16.28■□□□□ 0.2
CDH1-204ENST00000562118 SLC9C2Q5TAH2 1124 aa16.28■□□□□ 0.2
CDH1-204ENST00000562118 FAM151AQ8WW52 585 aa16.28■□□□□ 0.2
CDH1-204ENST00000562118 HHIPL1Q96JK4 782 aa16.28■□□□□ 0.2
CDH1-204ENST00000562118 USP40Q9NVE5 1235 aa16.28■□□□□ 0.2
CDH1-204ENST00000562118 ZNF532Q9HCE3 1301 aa16.27■□□□□ 0.2
CDH1-204ENST00000562118 PCNTO95613 3336 aa16.27■□□□□ 0.2
CDH1-204ENST00000562118 PLCG2P16885 1265 aa16.27■□□□□ 0.2
CDH1-204ENST00000562118 CYP7A1P22680 504 aa16.27■□□□□ 0.2
CDH1-204ENST00000562118 CACNB3P54284 484 aa16.27■□□□□ 0.2
CDH1-204ENST00000562118 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.27■□□□□ 0.2
CDH1-204ENST00000562118 VEZTQ9HBM0 779 aa16.27■□□□□ 0.2
CDH1-204ENST00000562118 DDX4Q9NQI0 724 aaKnown RBP16.27■□□□□ 0.2
CDH1-204ENST00000562118 MKRN1Q9UHC7 482 aaKnown RBP16.27■□□□□ 0.2
CDH1-204ENST00000562118 SCAF8Q9UPN6 1271 aaKnown RBP16.27■□□□□ 0.2
CDH1-204ENST00000562118 TLL2Q9Y6L7 1015 aa16.27■□□□□ 0.2
CDH1-204ENST00000562118 RASSF10A6NK89 507 aa16.26■□□□□ 0.19
CDH1-204ENST00000562118 CELF2O95319 508 aaKnown RBP16.26■□□□□ 0.19
CDH1-204ENST00000562118 BAG3O95817 575 aa16.26■□□□□ 0.19
CDH1-204ENST00000562118 TNNI2P48788 182 aa16.26■□□□□ 0.19
CDH1-204ENST00000562118 MAP3K10Q02779 954 aa16.26■□□□□ 0.19
CDH1-204ENST00000562118 SAPCD2Q86UD0 394 aa16.26■□□□□ 0.19
CDH1-204ENST00000562118 CDAN1Q8IWY9 1227 aa16.26■□□□□ 0.19
CDH1-204ENST00000562118 AATFQ9NY61 560 aaKnown RBP eCLIP16.26■□□□□ 0.19
CDH1-204ENST00000562118 TMOD2Q9NZR1 351 aa16.26■□□□□ 0.19
CDH1-204ENST00000562118 UNCXA6NJT0 531 aa16.25■□□□□ 0.19
CDH1-204ENST00000562118 TCP10L2B9ZVM9 353 aa16.25■□□□□ 0.19
CDH1-204ENST00000562118 CHGBP05060 677 aa16.25■□□□□ 0.19
CDH1-204ENST00000562118 ZFYP08048 801 aaPredicted RBP16.25■□□□□ 0.19
CDH1-204ENST00000562118 ZSCAN25Q6NSZ9 544 aa16.25■□□□□ 0.19
CDH1-204ENST00000562118 SH3BP5LQ7L8J4 393 aa16.25■□□□□ 0.19
CDH1-204ENST00000562118 SH3RF3Q8TEJ3 882 aaPredicted RBP16.25■□□□□ 0.19
CDH1-204ENST00000562118 EVI5LQ96CN4 794 aa16.25■□□□□ 0.19
CDH1-204ENST00000562118 TMEM39BQ9GZU3 492 aa16.25■□□□□ 0.19
CDH1-204ENST00000562118 RGS3P49796 1198 aa16.24■□□□□ 0.19
CDH1-204ENST00000562118 NBPF12Q5TAG4 269 aaPredicted RBP16.24■□□□□ 0.19
CDH1-204ENST00000562118 METTL16Q86W50 562 aaKnown RBP16.24■□□□□ 0.19
CDH1-204ENST00000562118 OSBPL5Q9H0X9 879 aaPredicted RBP16.24■□□□□ 0.19
CDH1-204ENST00000562118 GBA2Q9HCG7 927 aaPredicted RBP16.24■□□□□ 0.19
CDH1-204ENST00000562118 FLT1P17948 1338 aa16.23■□□□□ 0.19
CDH1-204ENST00000562118 RNF113AO15541 343 aaKnown RBP16.23■□□□□ 0.19
CDH1-204ENST00000562118 GSPT1P15170 499 aaKnown RBP16.23■□□□□ 0.19
CDH1-204ENST00000562118 DYNLL1P63167 89 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms