RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 PPP2R3BQ9Y5P8 575 aa11.7□□□□□ -0.54
RABGGTA-221ENST00000561055 NDUFB9Q9Y6M9 179 aa11.7□□□□□ -0.54
RABGGTA-221ENST00000561055 GOLIM4O00461 696 aa11.69□□□□□ -0.54
RABGGTA-221ENST00000561055 NPM3O75607 178 aaKnown RBP11.69□□□□□ -0.54
RABGGTA-221ENST00000561055 TNFAIP1Q13829 316 aa11.69□□□□□ -0.54
RABGGTA-221ENST00000561055 NAA16Q6N069 864 aaPredicted RBP11.69□□□□□ -0.54
RABGGTA-221ENST00000561055 CDC42EP5Q6NZY7 148 aa11.69□□□□□ -0.54
RABGGTA-221ENST00000561055 USP48Q86UV5 1035 aa11.69□□□□□ -0.54
RABGGTA-221ENST00000561055 FAM83AQ86UY5 434 aa11.69□□□□□ -0.54
RABGGTA-221ENST00000561055 CERS3Q8IU89 383 aa11.69□□□□□ -0.54
RABGGTA-221ENST00000561055 EDC3Q96F86 508 aaKnown RBP11.69□□□□□ -0.54
RABGGTA-221ENST00000561055 DNAJC2Q99543 621 aaKnown RBP11.69□□□□□ -0.54
RABGGTA-221ENST00000561055 IDI2Q9BXS1 227 aa11.69□□□□□ -0.54
RABGGTA-221ENST00000561055 BCL11AQ9H165 835 aa11.69□□□□□ -0.54
RABGGTA-221ENST00000561055 LAMB1P07942 1786 aa11.69□□□□□ -0.54
RABGGTA-221ENST00000561055 RFX7Q2KHR2 1363 aa11.68□□□□□ -0.54
RABGGTA-221ENST00000561055 BAZ2AQ9UIF9 1905 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-221ENST00000561055 TCRBV5S4A2TA0A5A2 114 aa11.68□□□□□ -0.54
RABGGTA-221ENST00000561055 IDH1O75874 414 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-221ENST00000561055 RHBDL3P58872 404 aa11.68□□□□□ -0.54
RABGGTA-221ENST00000561055 TSHZ3Q63HK5 1081 aa11.68□□□□□ -0.54
RABGGTA-221ENST00000561055 KBTBD3Q8NAB2 608 aa11.68□□□□□ -0.54
RABGGTA-221ENST00000561055 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.68□□□□□ -0.54
RABGGTA-221ENST00000561055 DEFB129Q9H1M3 183 aa11.68□□□□□ -0.54
RABGGTA-221ENST00000561055 PAPPA2Q9BXP8 1791 aa11.68□□□□□ -0.54
RABGGTA-221ENST00000561055 RPAP1Q9BWH6 1393 aaPredicted RBP11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 SIPA1L1O43166 1804 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 DDX60LQ5H9U9 1706 aaKnown RBP11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 MYH8P13535 1937 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 CLRN2A0PK11 232 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 ADM5C9JUS6 153 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 BAG3O95817 575 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 PDE6AP16499 860 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 HSPA6P17066 643 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 PDE4AP27815 886 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 ADD2P35612 726 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 BTDP43251 543 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 TNNI2P48788 182 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 APLP1P51693 650 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 UBE3CQ15386 1083 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 SLC9C2Q5TAH2 1124 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 CST9Q5W186 159 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 ZSCAN25Q6NSZ9 544 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 ADGRA1Q86SQ6 560 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 MAGEB6Q8N7X4 407 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 CDCA5Q96FF9 252 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 CCDC136Q96JN2 1154 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 USP40Q9NVE5 1235 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 PPP4R2Q9NY27 417 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 TMOD2Q9NZR1 351 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 NAV1Q8NEY1 1877 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 CNTNAP1P78357 1384 aa11.67□□□□□ -0.54
RABGGTA-221ENST00000561055 COL2A1P02458 1487 aaPredicted RBP11.66□□□□□ -0.54
RABGGTA-221ENST00000561055 TRAF5O00463 557 aa11.66□□□□□ -0.54
RABGGTA-221ENST00000561055 ENTPD3O75355 529 aa11.66□□□□□ -0.54
RABGGTA-221ENST00000561055 WDHD1O75717 1129 aaPredicted RBP11.66□□□□□ -0.54
RABGGTA-221ENST00000561055 ZFYP08048 801 aaPredicted RBP11.66□□□□□ -0.54
RABGGTA-221ENST00000561055 PLCG2P16885 1265 aa11.66□□□□□ -0.54
RABGGTA-221ENST00000561055 CYP7A1P22680 504 aa11.66□□□□□ -0.54
RABGGTA-221ENST00000561055 RASA3Q14644 834 aa11.66□□□□□ -0.54
RABGGTA-221ENST00000561055 FAM151AQ8WW52 585 aa11.66□□□□□ -0.54
RABGGTA-221ENST00000561055 EVI5LQ96CN4 794 aa11.66□□□□□ -0.54
RABGGTA-221ENST00000561055 TEPSINQ96N21 525 aa11.66□□□□□ -0.54
RABGGTA-221ENST00000561055 OTOFQ9HC10 1997 aa11.66□□□□□ -0.54
RABGGTA-221ENST00000561055 ZNF532Q9HCE3 1301 aa11.65□□□□□ -0.54
RABGGTA-221ENST00000561055 TMEM88BA6NKF7 163 aa11.65□□□□□ -0.54
RABGGTA-221ENST00000561055 FKBP1BP68106 108 aa11.65□□□□□ -0.54
RABGGTA-221ENST00000561055 FMR1Q06787 632 aaKnown RBP eCLIP11.65□□□□□ -0.54
RABGGTA-221ENST00000561055 LRRFIP1Q32MZ4 808 aaKnown RBP11.65□□□□□ -0.54
RABGGTA-221ENST00000561055 RIOK1Q9BRS2 568 aaKnown RBP11.65□□□□□ -0.54
RABGGTA-221ENST00000561055 NOL10Q9BSC4 688 aaKnown RBP11.65□□□□□ -0.54
RABGGTA-221ENST00000561055 VEZTQ9HBM0 779 aa11.65□□□□□ -0.54
RABGGTA-221ENST00000561055 CREBZFQ9NS37 354 aa11.65□□□□□ -0.54
RABGGTA-221ENST00000561055 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
RABGGTA-221ENST00000561055 ATAD5Q96QE3 1844 aa11.65□□□□□ -0.55
RABGGTA-221ENST00000561055 TCP10L2B9ZVM9 353 aa11.64□□□□□ -0.55
RABGGTA-221ENST00000561055 CACNB3P54284 484 aa11.64□□□□□ -0.55
RABGGTA-221ENST00000561055 NFIAQ12857 509 aa11.64□□□□□ -0.55
RABGGTA-221ENST00000561055 MAP3K11Q16584 847 aa11.64□□□□□ -0.55
RABGGTA-221ENST00000561055 SUPT20HL1Q3ZLR7 823 aa11.64□□□□□ -0.55
RABGGTA-221ENST00000561055 DLK2Q6UY11 383 aa11.64□□□□□ -0.55
RABGGTA-221ENST00000561055 SH3RF3Q8TEJ3 882 aaPredicted RBP11.64□□□□□ -0.55
RABGGTA-221ENST00000561055 HHIPL1Q96JK4 782 aa11.64□□□□□ -0.55
RABGGTA-221ENST00000561055 AATFQ9NY61 560 aaKnown RBP eCLIP11.64□□□□□ -0.55
RABGGTA-221ENST00000561055 SCAF8Q9UPN6 1271 aaKnown RBP11.64□□□□□ -0.55
RABGGTA-221ENST00000561055 ATRNL1Q5VV63 1379 aa11.64□□□□□ -0.55
RABGGTA-221ENST00000561055 SSC5DA1L4H1 1573 aa11.63□□□□□ -0.55
RABGGTA-221ENST00000561055 UNCXA6NJT0 531 aa11.63□□□□□ -0.55
RABGGTA-221ENST00000561055 RNF113AO15541 343 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-221ENST00000561055 CELF2O95319 508 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-221ENST00000561055 RGS3P49796 1198 aa11.63□□□□□ -0.55
RABGGTA-221ENST00000561055 MAP3K10Q02779 954 aa11.63□□□□□ -0.55
RABGGTA-221ENST00000561055 NBPF12Q5TAG4 269 aaPredicted RBP11.63□□□□□ -0.55
RABGGTA-221ENST00000561055 APPBP2Q92624 585 aa11.63□□□□□ -0.55
RABGGTA-221ENST00000561055 HOOK2Q96ED9 719 aa11.63□□□□□ -0.55
RABGGTA-221ENST00000561055 TMEM39BQ9GZU3 492 aa11.63□□□□□ -0.55
RABGGTA-221ENST00000561055 DDX4Q9NQI0 724 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-221ENST00000561055 MKRN1Q9UHC7 482 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-221ENST00000561055 MAGEB6P1A0A0J9YX57 407 aa11.62□□□□□ -0.55
RABGGTA-221ENST00000561055 NF2P35240 595 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms