RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 RNF41Q9H4P4 317 aaPredicted RBP20.23■□□□□ 0.83
HDDC3-206ENST00000561036 ATP8A2Q9NTI2 1148 aa20.23■□□□□ 0.83
HDDC3-206ENST00000561036 PRC1O43663 620 aa20.22■□□□□ 0.83
HDDC3-206ENST00000561036 PFKFB2O60825 505 aa20.22■□□□□ 0.83
HDDC3-206ENST00000561036 BAG3O95817 575 aa20.22■□□□□ 0.83
HDDC3-206ENST00000561036 CHRNA5P30532 468 aa20.22■□□□□ 0.83
HDDC3-206ENST00000561036 MCM4P33991 863 aa20.22■□□□□ 0.83
HDDC3-206ENST00000561036 DYNLL1P63167 89 aaKnown RBP20.22■□□□□ 0.83
HDDC3-206ENST00000561036 AKNAD1Q5T1N1 836 aa20.22■□□□□ 0.83
HDDC3-206ENST00000561036 STAG1Q8WVM7 1258 aa20.22■□□□□ 0.83
HDDC3-206ENST00000561036 C7orf43Q8WVR3 580 aa20.22■□□□□ 0.83
HDDC3-206ENST00000561036 BRF1Q92994 677 aa20.22■□□□□ 0.83
HDDC3-206ENST00000561036 KRT23Q9C075 422 aa20.22■□□□□ 0.83
HDDC3-206ENST00000561036 PDGFDQ9GZP0 370 aaPredicted RBP20.22■□□□□ 0.83
HDDC3-206ENST00000561036 PCP11498 1178 aaKnown RBP20.21■□□□□ 0.83
HDDC3-206ENST00000561036 PTMSP20962 102 aa20.21■□□□□ 0.83
HDDC3-206ENST00000561036 GTF3C6Q969F1 213 aa20.21■□□□□ 0.83
HDDC3-206ENST00000561036 FAM163AQ96GL9 167 aaPredicted RBP20.21■□□□□ 0.83
HDDC3-206ENST00000561036 LLPHQ9BRT6 129 aaKnown RBP20.21■□□□□ 0.83
HDDC3-206ENST00000561036 NOL10Q9BSC4 688 aaKnown RBP20.21■□□□□ 0.83
HDDC3-206ENST00000561036 MTA3Q9BTC8 594 aa20.21■□□□□ 0.83
HDDC3-206ENST00000561036 DLEC1Q9Y238 1755 aa20.21■□□□□ 0.83
HDDC3-206ENST00000561036 RIMBP2O15034 1052 aa20.2■□□□□ 0.82
HDDC3-206ENST00000561036 BRD1O95696 1058 aa20.2■□□□□ 0.82
HDDC3-206ENST00000561036 ST3GAL1Q11201 340 aa20.2■□□□□ 0.82
HDDC3-206ENST00000561036 MFSD14BQ5SR56 506 aa20.2■□□□□ 0.82
HDDC3-206ENST00000561036 MFSD6Q6ZSS7 791 aa20.2■□□□□ 0.82
HDDC3-206ENST00000561036 NECAB1Q8N987 351 aa20.2■□□□□ 0.82
HDDC3-206ENST00000561036 SUPT20HQ8NEM7 779 aa20.2■□□□□ 0.82
HDDC3-206ENST00000561036 TMEM87BQ96K49 555 aa20.2■□□□□ 0.82
HDDC3-206ENST00000561036 AATFQ9NY61 560 aaKnown RBP eCLIP20.2■□□□□ 0.82
HDDC3-206ENST00000561036 JAG2Q9Y219 1238 aa20.2■□□□□ 0.82
HDDC3-206ENST00000561036 MROH7-TTC4A0A0A0MT08 1334 aa20.2■□□□□ 0.82
HDDC3-206ENST00000561036 SLX4Q8IY92 1834 aa20.2■□□□□ 0.82
HDDC3-206ENST00000561036 DDX11L8A8MPP1 907 aa20.19■□□□□ 0.82
HDDC3-206ENST00000561036 ANTXR2P58335 489 aa20.19■□□□□ 0.82
HDDC3-206ENST00000561036 PPARAQ07869 468 aa20.19■□□□□ 0.82
HDDC3-206ENST00000561036 OLFM4Q6UX06 510 aa20.19■□□□□ 0.82
HDDC3-206ENST00000561036 PODNQ7Z5L7 613 aa20.19■□□□□ 0.82
HDDC3-206ENST00000561036 SDR42E1Q8WUS8 393 aa20.19■□□□□ 0.82
HDDC3-206ENST00000561036 LRRC2Q9BYS8 371 aa20.19■□□□□ 0.82
HDDC3-206ENST00000561036 ZDHHC9Q9Y397 364 aa20.19■□□□□ 0.82
HDDC3-206ENST00000561036 WDR33Q9C0J8 1336 aaKnown RBP20.19■□□□□ 0.82
HDDC3-206ENST00000561036 PLCG2P16885 1265 aa20.18■□□□□ 0.82
HDDC3-206ENST00000561036 PDCP20941 246 aa20.18■□□□□ 0.82
HDDC3-206ENST00000561036 NT5C2P49902 561 aa20.18■□□□□ 0.82
HDDC3-206ENST00000561036 SBK1Q52WX2 424 aa20.18■□□□□ 0.82
HDDC3-206ENST00000561036 KIF13BQ9NQT8 1826 aa20.18■□□□□ 0.82
HDDC3-206ENST00000561036 GPR75-ASB3A0A0A6YYF3 556 aa20.17■□□□□ 0.82
HDDC3-206ENST00000561036 G3V3G9 751 aa20.17■□□□□ 0.82
HDDC3-206ENST00000561036 GJB2P29033 226 aa20.17■□□□□ 0.82
HDDC3-206ENST00000561036 FKBP1AP62942 108 aaKnown RBP20.17■□□□□ 0.82
HDDC3-206ENST00000561036 GTF2IP78347 998 aa20.17■□□□□ 0.82
HDDC3-206ENST00000561036 CTDSPL2Q05D32 466 aa20.17■□□□□ 0.82
HDDC3-206ENST00000561036 APOBRQ0VD83 1088 aa20.17■□□□□ 0.82
HDDC3-206ENST00000561036 GRIK5Q16478 980 aa20.17■□□□□ 0.82
HDDC3-206ENST00000561036 DCAF8Q5TAQ9 597 aa20.17■□□□□ 0.82
HDDC3-206ENST00000561036 TTLL6Q8N841 843 aa20.17■□□□□ 0.82
HDDC3-206ENST00000561036 DCP1AQ9NPI6 582 aaPredicted RBP20.17■□□□□ 0.82
HDDC3-206ENST00000561036 ARPP21Q9UBL0 812 aaPredicted RBP20.17■□□□□ 0.82
HDDC3-206ENST00000561036 ANGEL1Q9UNK9 670 aaKnown RBP20.17■□□□□ 0.82
HDDC3-206ENST00000561036 NEDD4P46934 1319 aa20.17■□□□□ 0.82
HDDC3-206ENST00000561036 CHD4Q14839 1912 aa20.17■□□□□ 0.82
HDDC3-206ENST00000561036 SNED1Q8TER0 1413 aa20.17■□□□□ 0.82
HDDC3-206ENST00000561036 B4E1Z4 1266 aa20.16■□□□□ 0.82
HDDC3-206ENST00000561036 FGRP09769 529 aa20.16■□□□□ 0.82
HDDC3-206ENST00000561036 PDIA3P30101 505 aaKnown RBP20.16■□□□□ 0.82
HDDC3-206ENST00000561036 PKP1Q13835 747 aa20.16■□□□□ 0.82
HDDC3-206ENST00000561036 CHST3Q7LGC8 479 aa20.16■□□□□ 0.82
HDDC3-206ENST00000561036 MTFR1LQ9H019 292 aa20.16■□□□□ 0.82
HDDC3-206ENST00000561036 GAKO14976 1311 aa20.16■□□□□ 0.82
HDDC3-206ENST00000561036 MINDY4BA8MYZ0 360 aa20.15■□□□□ 0.82
HDDC3-206ENST00000561036 GOLGA6L22H0YM25 854 aa20.15■□□□□ 0.82
HDDC3-206ENST00000561036 SH2B2O14492 632 aaPredicted RBP20.15■□□□□ 0.82
HDDC3-206ENST00000561036 BAG4O95429 457 aaKnown RBP20.15■□□□□ 0.82
HDDC3-206ENST00000561036 SLC3A2P08195 630 aaKnown RBP20.15■□□□□ 0.82
HDDC3-206ENST00000561036 POLD1P28340 1107 aa20.15■□□□□ 0.82
HDDC3-206ENST00000561036 TGFB2P61812 414 aa20.15■□□□□ 0.82
HDDC3-206ENST00000561036 CTR9Q6PD62 1173 aa20.15■□□□□ 0.82
HDDC3-206ENST00000561036 CYB5R4Q7L1T6 521 aa20.15■□□□□ 0.82
HDDC3-206ENST00000561036 RTKN2Q8IZC4 609 aa20.15■□□□□ 0.82
HDDC3-206ENST00000561036 STX6O43752 255 aa20.14■□□□□ 0.81
HDDC3-206ENST00000561036 DHX16O60231 1041 aaKnown RBP20.14■□□□□ 0.81
HDDC3-206ENST00000561036 SYT1P21579 422 aa20.14■□□□□ 0.81
HDDC3-206ENST00000561036 LIFRP42702 1097 aa20.14■□□□□ 0.81
HDDC3-206ENST00000561036 SCRN1Q12765 414 aa20.14■□□□□ 0.81
HDDC3-206ENST00000561036 STK3Q13188 491 aa20.14■□□□□ 0.81
HDDC3-206ENST00000561036 SART3Q15020 963 aaKnown RBP20.14■□□□□ 0.81
HDDC3-206ENST00000561036 DIXDC1Q155Q3 683 aa20.14■□□□□ 0.81
HDDC3-206ENST00000561036 DOK7Q18PE1 504 aa20.14■□□□□ 0.81
HDDC3-206ENST00000561036 SMARCC2Q8TAQ2 1214 aa20.14■□□□□ 0.81
HDDC3-206ENST00000561036 MKRN1Q9UHC7 482 aaKnown RBP20.14■□□□□ 0.81
HDDC3-206ENST00000561036 MYH2Q9UKX2 1941 aa20.14■□□□□ 0.81
HDDC3-206ENST00000561036 USP17L12C9JPN9 530 aa20.13■□□□□ 0.81
HDDC3-206ENST00000561036 USP17L21D6R901 530 aa20.13■□□□□ 0.81
HDDC3-206ENST00000561036 KDM4AO75164 1064 aa20.13■□□□□ 0.81
HDDC3-206ENST00000561036 HMGN5P82970 282 aaKnown RBP20.13■□□□□ 0.81
HDDC3-206ENST00000561036 KIAA2012Q0VF49 1180 aa20.13■□□□□ 0.81
HDDC3-206ENST00000561036 CCDC93Q567U6 631 aa20.13■□□□□ 0.81
HDDC3-206ENST00000561036 SOGA3Q5TF21 947 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms