RNA–Protein interactions for RNA: ENST00000560444.1

PIF1-208, Transcript of PIF1 5'-to-3' DNA helicase, human

TSL 2

Gene PIF1, Length 1,631 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIF1-208	ENST00000560444	SRGN	P10124	158 aa		28	■■■□□ 2.07
PIF1-208	ENST00000560444	STAG1	Q8WVM7	1258 aa		28	■■■□□ 2.07
PIF1-208	ENST00000560444	ANAPC4	Q9UJX5	808 aa		28	■■■□□ 2.07
PIF1-208	ENST00000560444	PPEF1	O14829	653 aa	Predicted RBP	27.99	■■■□□ 2.07
PIF1-208	ENST00000560444	MFSD6	Q6ZSS7	791 aa		27.99	■■■□□ 2.07
PIF1-208	ENST00000560444	ATP6V0A2	Q9Y487	856 aa		27.99	■■■□□ 2.07
PIF1-208	ENST00000560444	DHX16	O60231	1041 aa	Known RBP	27.98	■■■□□ 2.07
PIF1-208	ENST00000560444	IL1R1	P14778	569 aa		27.98	■■■□□ 2.07
PIF1-208	ENST00000560444	MTA3	Q9BTC8	594 aa		27.98	■■■□□ 2.07
PIF1-208	ENST00000560444	ANGEL1	Q9UNK9	670 aa	Known RBP	27.98	■■■□□ 2.07
PIF1-208	ENST00000560444	NSUN7	Q8NE18	718 aa	Known RBP	27.97	■■■□□ 2.07
PIF1-208	ENST00000560444	TBC1D16	Q8TBP0	767 aa		27.97	■■■□□ 2.07
PIF1-208	ENST00000560444	PDGFD	Q9GZP0	370 aa	Predicted RBP	27.97	■■■□□ 2.07
PIF1-208	ENST00000560444	CD209	Q9NNX6	404 aa		27.97	■■■□□ 2.07
PIF1-208	ENST00000560444	QSER1	Q2KHR3	1735 aa		27.96	■■■□□ 2.07
PIF1-208	ENST00000560444	VPS37C	A5D8V6	355 aa	Predicted RBP	27.96	■■■□□ 2.07
PIF1-208	ENST00000560444	PRDX5	P30044	214 aa		27.96	■■■□□ 2.07
PIF1-208	ENST00000560444	GSTO1	P78417	241 aa		27.96	■■■□□ 2.07
PIF1-208	ENST00000560444	CYB5R4	Q7L1T6	521 aa		27.96	■■■□□ 2.07
PIF1-208	ENST00000560444	NEDD4	P46934	1319 aa		27.96	■■■□□ 2.07
PIF1-208	ENST00000560444		B4E1Z4	1266 aa		27.96	■■■□□ 2.07
PIF1-208	ENST00000560444	JAK2	O60674	1132 aa		27.96	■■■□□ 2.07
PIF1-208	ENST00000560444	LDHB	P07195	334 aa	Known RBP	27.96	■■■□□ 2.07
PIF1-208	ENST00000560444	CTDSPL2	Q05D32	466 aa		27.96	■■■□□ 2.07
PIF1-208	ENST00000560444	PPARA	Q07869	468 aa		27.96	■■■□□ 2.07
PIF1-208	ENST00000560444	DZIP1	Q86YF9	867 aa	Known RBP	27.96	■■■□□ 2.07
PIF1-208	ENST00000560444	FAM184A	Q8NB25	1140 aa		27.96	■■■□□ 2.07
PIF1-208	ENST00000560444	TMEM87A	Q8NBN3	555 aa		27.96	■■■□□ 2.07
PIF1-208	ENST00000560444	TIAM2	Q8IVF5	1701 aa		27.95	■■■□□ 2.07
PIF1-208	ENST00000560444	KLF18	A0A0U1RQI7	1052 aa		27.95	■■■□□ 2.06
PIF1-208	ENST00000560444	SH2B2	O14492	632 aa	Predicted RBP	27.95	■■■□□ 2.06
PIF1-208	ENST00000560444	DYNLL1	P63167	89 aa	Known RBP	27.95	■■■□□ 2.06
PIF1-208	ENST00000560444	CCT2	P78371	535 aa	Known RBP	27.95	■■■□□ 2.06
PIF1-208	ENST00000560444	MASTL	Q96GX5	879 aa		27.95	■■■□□ 2.06
PIF1-208	ENST00000560444	CRNKL1	Q9BZJ0	848 aa	Known RBP	27.95	■■■□□ 2.06
PIF1-208	ENST00000560444	GZF1	Q9H116	711 aa	Predicted RBP	27.95	■■■□□ 2.06
PIF1-208	ENST00000560444	POLL	Q9UGP5	575 aa		27.95	■■■□□ 2.06
PIF1-208	ENST00000560444	BRPF3	Q9ULD4	1205 aa		27.95	■■■□□ 2.06
PIF1-208	ENST00000560444	NAP1L2	Q9ULW6	460 aa	Predicted RBP	27.95	■■■□□ 2.06
PIF1-208	ENST00000560444	CTDNEP1	O95476	244 aa		27.94	■■■□□ 2.06
PIF1-208	ENST00000560444	PC	P11498	1178 aa	Known RBP	27.94	■■■□□ 2.06
PIF1-208	ENST00000560444	SLC51A	Q86UW1	340 aa		27.94	■■■□□ 2.06
PIF1-208	ENST00000560444	IGDCC4	Q8TDY8	1250 aa		27.94	■■■□□ 2.06
PIF1-208	ENST00000560444	SDR42E1	Q8WUS8	393 aa		27.94	■■■□□ 2.06
PIF1-208	ENST00000560444	GPHN	Q9NQX3	736 aa	Predicted RBP	27.94	■■■□□ 2.06
PIF1-208	ENST00000560444	MYH13	Q9UKX3	1938 aa		27.94	■■■□□ 2.06
PIF1-208	ENST00000560444	MBD3	O95983	291 aa		27.93	■■■□□ 2.06
PIF1-208	ENST00000560444	LIFR	P42702	1097 aa		27.93	■■■□□ 2.06
PIF1-208	ENST00000560444	CSPP1	Q1MSJ5	1256 aa		27.93	■■■□□ 2.06
PIF1-208	ENST00000560444	ATP8A2	Q9NTI2	1148 aa		27.93	■■■□□ 2.06
PIF1-208	ENST00000560444	PTPDC1	A2A3K4	754 aa		27.92	■■■□□ 2.06
PIF1-208	ENST00000560444	LDHC	P07864	332 aa		27.92	■■■□□ 2.06
PIF1-208	ENST00000560444	SGMS1	Q86VZ5	419 aa		27.92	■■■□□ 2.06
PIF1-208	ENST00000560444	CHAMP1	Q96JM3	812 aa		27.92	■■■□□ 2.06
PIF1-208	ENST00000560444	ZSWIM5	Q9P217	1185 aa		27.92	■■■□□ 2.06
PIF1-208	ENST00000560444	LRRC37A	A6NMS7	1700 aa		27.92	■■■□□ 2.06
PIF1-208	ENST00000560444	TMX4	Q9H1E5	349 aa	Predicted RBP	27.92	■■■□□ 2.06
PIF1-208	ENST00000560444	HPS5	Q9UPZ3	1129 aa		27.92	■■■□□ 2.06
PIF1-208	ENST00000560444	MAST2	Q6P0Q8	1798 aa		27.92	■■■□□ 2.06
PIF1-208	ENST00000560444	ANKRD31	Q8N7Z5	1873 aa		27.91	■■■□□ 2.06
PIF1-208	ENST00000560444	DUOX1	Q9NRD9	1551 aa		27.91	■■■□□ 2.06
PIF1-208	ENST00000560444	GOLGA8B	A8MQT2	603 aa		27.91	■■■□□ 2.06
PIF1-208	ENST00000560444	C6orf229	H3BNL8	230 aa		27.91	■■■□□ 2.06
PIF1-208	ENST00000560444	NCL	P19338	710 aa	Known RBP	27.91	■■■□□ 2.06
PIF1-208	ENST00000560444	CERS3	Q8IU89	383 aa		27.91	■■■□□ 2.06
PIF1-208	ENST00000560444	AATF	Q9NY61	560 aa	Known RBP eCLIP	27.91	■■■□□ 2.06
PIF1-208	ENST00000560444	DTNB	O60941	627 aa		27.9	■■■□□ 2.06
PIF1-208	ENST00000560444	KDM4A	O75164	1064 aa		27.9	■■■□□ 2.06
PIF1-208	ENST00000560444	SART3	Q15020	963 aa	Known RBP	27.9	■■■□□ 2.06
PIF1-208	ENST00000560444	CDC37L1	Q7L3B6	337 aa		27.9	■■■□□ 2.06
PIF1-208	ENST00000560444	TBC1D22A	Q8WUA7	517 aa		27.9	■■■□□ 2.06
PIF1-208	ENST00000560444	DDX11	Q96FC9	970 aa		27.9	■■■□□ 2.06
PIF1-208	ENST00000560444	GPR101	Q96P66	508 aa	Predicted RBP	27.9	■■■□□ 2.06
PIF1-208	ENST00000560444	NCOA5	Q9HCD5	579 aa	Known RBP	27.9	■■■□□ 2.06
PIF1-208	ENST00000560444	ISY1	Q9ULR0	285 aa	Known RBP	27.9	■■■□□ 2.06
PIF1-208	ENST00000560444	TACC3	Q9Y6A5	838 aa		27.9	■■■□□ 2.06
PIF1-208	ENST00000560444	MINDY4B	A8MYZ0	360 aa		27.89	■■■□□ 2.06
PIF1-208	ENST00000560444	TMEM67	Q5HYA8	995 aa		27.89	■■■□□ 2.06
PIF1-208	ENST00000560444	USP48	Q86UV5	1035 aa		27.89	■■■□□ 2.06
PIF1-208	ENST00000560444	TMTC2	Q8N394	836 aa		27.89	■■■□□ 2.06
PIF1-208	ENST00000560444	INCENP	Q9NQS7	918 aa		27.89	■■■□□ 2.06
PIF1-208	ENST00000560444		H3BQV1	296 aa		27.89	■■■□□ 2.05
PIF1-208	ENST00000560444	BAG3	O95817	575 aa		27.89	■■■□□ 2.05
PIF1-208	ENST00000560444	FGR	P09769	529 aa		27.89	■■■□□ 2.05
PIF1-208	ENST00000560444	PPP4C	P60510	307 aa		27.89	■■■□□ 2.05
PIF1-208	ENST00000560444	IFFO2	Q5TF58	517 aa		27.89	■■■□□ 2.05
PIF1-208	ENST00000560444	RGS22	Q8NE09	1264 aa		27.89	■■■□□ 2.05
PIF1-208	ENST00000560444	COA1	Q9GZY4	146 aa		27.89	■■■□□ 2.05
PIF1-208	ENST00000560444	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	27.89	■■■□□ 2.05
PIF1-208	ENST00000560444	LY9	Q9HBG7	655 aa		27.89	■■■□□ 2.05
PIF1-208	ENST00000560444	JAG2	Q9Y219	1238 aa		27.89	■■■□□ 2.05
PIF1-208	ENST00000560444	IFIT3	O14879	490 aa	Known RBP	27.88	■■■□□ 2.05
PIF1-208	ENST00000560444	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	27.88	■■■□□ 2.05
PIF1-208	ENST00000560444	SBK1	Q52WX2	424 aa		27.88	■■■□□ 2.05
PIF1-208	ENST00000560444	CTR9	Q6PD62	1173 aa		27.88	■■■□□ 2.05
PIF1-208	ENST00000560444	FOXD4L3	Q6VB84	417 aa	Predicted RBP	27.88	■■■□□ 2.05
PIF1-208	ENST00000560444	MPND	Q8N594	471 aa		27.88	■■■□□ 2.05
PIF1-208	ENST00000560444	NKX2-3	Q8TAU0	364 aa		27.88	■■■□□ 2.05
PIF1-208	ENST00000560444	GPT2	Q8TD30	523 aa		27.88	■■■□□ 2.05
PIF1-208	ENST00000560444	ESR2	Q92731	530 aa		27.88	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms