RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 FKBP1CQ5VVH2 108 aa15.32■□□□□ 0.04
SYNE2-219ENST00000555323 CDC42EP5Q6NZY7 148 aa15.32■□□□□ 0.04
SYNE2-219ENST00000555323 APPBP2Q92624 585 aa15.32■□□□□ 0.04
SYNE2-219ENST00000555323 CHGBP05060 677 aa15.31■□□□□ 0.04
SYNE2-219ENST00000555323 BTDP43251 543 aa15.31■□□□□ 0.04
SYNE2-219ENST00000555323 SLFNL1Q499Z3 407 aa15.31■□□□□ 0.04
SYNE2-219ENST00000555323 ZMYM1Q5SVZ6 1142 aa15.31■□□□□ 0.04
SYNE2-219ENST00000555323 LDHDQ86WU2 507 aa15.31■□□□□ 0.04
SYNE2-219ENST00000555323 RIOK1Q9BRS2 568 aaKnown RBP15.31■□□□□ 0.04
SYNE2-219ENST00000555323 TDRD3Q9H7E2 651 aaKnown RBP15.31■□□□□ 0.04
SYNE2-219ENST00000555323 ZNF70Q9UC06 446 aaPredicted RBP15.31■□□□□ 0.04
SYNE2-219ENST00000555323 PITPNM2Q9BZ72 1349 aa15.31■□□□□ 0.04
SYNE2-219ENST00000555323 HIP1O00291 1037 aa15.3■□□□□ 0.04
SYNE2-219ENST00000555323 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
SYNE2-219ENST00000555323 POTEIP0CG38 1075 aa15.3■□□□□ 0.04
SYNE2-219ENST00000555323 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
SYNE2-219ENST00000555323 PLCG2P16885 1265 aa15.3■□□□□ 0.04
SYNE2-219ENST00000555323 EAPPQ56P03 285 aaPredicted RBP15.3■□□□□ 0.04
SYNE2-219ENST00000555323 OSBP2Q969R2 916 aa15.3■□□□□ 0.04
SYNE2-219ENST00000555323 IDI2Q9BXS1 227 aa15.3■□□□□ 0.04
SYNE2-219ENST00000555323 PUS7LQ9H0K6 701 aaKnown RBP15.3■□□□□ 0.04
SYNE2-219ENST00000555323 HELLSQ9NRZ9 838 aa15.3■□□□□ 0.04
SYNE2-219ENST00000555323 USP40Q9NVE5 1235 aa15.3■□□□□ 0.04
SYNE2-219ENST00000555323 AATFQ9NY61 560 aaKnown RBP eCLIP15.3■□□□□ 0.04
SYNE2-219ENST00000555323 MYO5AQ9Y4I1 1855 aaKnown RBP15.3■□□□□ 0.04
SYNE2-219ENST00000555323 ASTN2O75129 1339 aaPredicted RBP15.29■□□□□ 0.04
SYNE2-219ENST00000555323 MAGEB6P1A0A0J9YX57 407 aa15.29■□□□□ 0.04
SYNE2-219ENST00000555323 ANGEL2Q5VTE6 544 aaKnown RBP15.29■□□□□ 0.04
SYNE2-219ENST00000555323 NOL10Q9BSC4 688 aaKnown RBP15.29■□□□□ 0.04
SYNE2-219ENST00000555323 MYH2Q9UKX2 1941 aa15.29■□□□□ 0.04
SYNE2-219ENST00000555323 WDHD1O75717 1129 aaPredicted RBP15.28■□□□□ 0.04
SYNE2-219ENST00000555323 TOMM70O94826 608 aa15.28■□□□□ 0.04
SYNE2-219ENST00000555323 DYNLL1P63167 89 aaKnown RBP15.28■□□□□ 0.04
SYNE2-219ENST00000555323 FAM83AQ86UY5 434 aa15.28■□□□□ 0.04
SYNE2-219ENST00000555323 MIGA1Q8NAN2 632 aa15.28■□□□□ 0.04
SYNE2-219ENST00000555323 DCPSQ96C86 337 aaKnown RBP15.28■□□□□ 0.04
SYNE2-219ENST00000555323 MAST2Q6P0Q8 1798 aa15.27■□□□□ 0.04
SYNE2-219ENST00000555323 ADAMTSL1Q8N6G6 1762 aa15.27■□□□□ 0.04
SYNE2-219ENST00000555323 CLRN2A0PK11 232 aa15.27■□□□□ 0.04
SYNE2-219ENST00000555323 CHMLP26374 656 aa15.27■□□□□ 0.04
SYNE2-219ENST00000555323 MCMDC2Q4G0Z9 681 aa15.27■□□□□ 0.04
SYNE2-219ENST00000555323 CHADLQ6NUI6 762 aa15.27■□□□□ 0.04
SYNE2-219ENST00000555323 CDC37L1Q7L3B6 337 aa15.27■□□□□ 0.04
SYNE2-219ENST00000555323 APOBEC3FQ8IUX4 373 aaKnown RBP15.27■□□□□ 0.04
SYNE2-219ENST00000555323 STRBPQ96SI9 672 aaKnown RBP15.27■□□□□ 0.04
SYNE2-219ENST00000555323 GGA3Q9NZ52 723 aa15.27■□□□□ 0.04
SYNE2-219ENST00000555323 CLEC11AQ9Y240 323 aa15.27■□□□□ 0.04
SYNE2-219ENST00000555323 ENTPD3O75355 529 aa15.26■□□□□ 0.03
SYNE2-219ENST00000555323 NMIQ13287 307 aaPredicted RBP15.26■□□□□ 0.03
SYNE2-219ENST00000555323 TNFAIP1Q13829 316 aa15.26■□□□□ 0.03
SYNE2-219ENST00000555323 RBM46Q8TBY0 533 aaKnown RBP15.26■□□□□ 0.03
SYNE2-219ENST00000555323 SH3RF3Q8TEJ3 882 aaPredicted RBP15.26■□□□□ 0.03
SYNE2-219ENST00000555323 AIDAQ96BJ3 306 aa15.26■□□□□ 0.03
SYNE2-219ENST00000555323 FAM227BQ96M60 508 aa15.26■□□□□ 0.03
SYNE2-219ENST00000555323 SEC62Q99442 399 aaKnown RBP15.26■□□□□ 0.03
SYNE2-219ENST00000555323 TMOD2Q9NZR1 351 aa15.26■□□□□ 0.03
SYNE2-219ENST00000555323 FAM198AQ9UFP1 575 aa15.26■□□□□ 0.03
SYNE2-219ENST00000555323 MKRN1Q9UHC7 482 aaKnown RBP15.26■□□□□ 0.03
SYNE2-219ENST00000555323 PPP2R3BQ9Y5P8 575 aa15.26■□□□□ 0.03
SYNE2-219ENST00000555323 A0A0D9SFI3 127 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 M0R2C6 588 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 GPAA1O43292 621 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 MBD4O95243 580 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 ITGBL1O95965 494 aaPredicted RBP15.25■□□□□ 0.03
SYNE2-219ENST00000555323 GNAT2P19087 354 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 TNNI2P48788 182 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 NFIAQ12857 509 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 SULF1Q8IWU6 871 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 TEX11Q8IYF3 940 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 LCORLQ8N3X6 602 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 FAM151AQ8WW52 585 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 DEFB129Q9H1M3 183 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 ARMT1Q9H993 441 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 VEZTQ9HBM0 779 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 DIAPH3Q9NSV4 1193 aa15.25■□□□□ 0.03
SYNE2-219ENST00000555323 TCP10L2B9ZVM9 353 aa15.24■□□□□ 0.03
SYNE2-219ENST00000555323 CACNB3P54284 484 aa15.24■□□□□ 0.03
SYNE2-219ENST00000555323 RASA3Q14644 834 aa15.24■□□□□ 0.03
SYNE2-219ENST00000555323 MAP1SQ66K74 1059 aaPredicted RBP15.24■□□□□ 0.03
SYNE2-219ENST00000555323 CWC27Q6UX04 472 aaKnown RBP15.24■□□□□ 0.03
SYNE2-219ENST00000555323 KRT26Q7Z3Y9 468 aa15.24■□□□□ 0.03
SYNE2-219ENST00000555323 SMC1BQ8NDV3 1235 aa15.24■□□□□ 0.03
SYNE2-219ENST00000555323 CRNKL1Q9BZJ0 848 aaKnown RBP15.24■□□□□ 0.03
SYNE2-219ENST00000555323 DDX4Q9NQI0 724 aaKnown RBP15.24■□□□□ 0.03
SYNE2-219ENST00000555323 ATP8A2Q9NTI2 1148 aa15.24■□□□□ 0.03
SYNE2-219ENST00000555323 CNTNAP1P78357 1384 aa15.24■□□□□ 0.03
SYNE2-219ENST00000555323 RPAP1Q9BWH6 1393 aaPredicted RBP15.24■□□□□ 0.03
SYNE2-219ENST00000555323 MYH7P12883 1935 aa15.23■□□□□ 0.03
SYNE2-219ENST00000555323 PATL2C9JE40 543 aaKnown RBP15.23■□□□□ 0.03
SYNE2-219ENST00000555323 FSTL1Q12841 308 aa15.23■□□□□ 0.03
SYNE2-219ENST00000555323 GIMAP6Q6P9H5 292 aa15.23■□□□□ 0.03
SYNE2-219ENST00000555323 USP48Q86UV5 1035 aa15.23■□□□□ 0.03
SYNE2-219ENST00000555323 TGFBRAP1Q8WUH2 860 aa15.23■□□□□ 0.03
SYNE2-219ENST00000555323 RUFY2Q8WXA3 655 aa15.23■□□□□ 0.03
SYNE2-219ENST00000555323 TEPSINQ96N21 525 aa15.23■□□□□ 0.03
SYNE2-219ENST00000555323 RAD50Q92878 1312 aa15.22■□□□□ 0.03
SYNE2-219ENST00000555323 GSG1L2A8MUP6 293 aa15.22■□□□□ 0.03
SYNE2-219ENST00000555323 PRKAB2O43741 272 aa15.22■□□□□ 0.03
SYNE2-219ENST00000555323 CDC45O75419 566 aa15.22■□□□□ 0.03
SYNE2-219ENST00000555323 MFAP1P55081 439 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms