RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 MCM5P33992 734 aa15.02■□□□□ -0
CACNB3-223ENST00000552480 TGFB2P61812 414 aa15.02■□□□□ -0
CACNB3-223ENST00000552480 GTF2IP78347 998 aa15.02■□□□□ -0
CACNB3-223ENST00000552480 TRDNQ13061 729 aa15.02■□□□□ -0
CACNB3-223ENST00000552480 RAB3GAP1Q15042 981 aa15.02■□□□□ -0
CACNB3-223ENST00000552480 ME3Q16798 604 aa15.02■□□□□ -0
CACNB3-223ENST00000552480 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
CACNB3-223ENST00000552480 SLF2Q8IX21 1173 aa15.02■□□□□ -0
CACNB3-223ENST00000552480 SDR42E1Q8WUS8 393 aa15.02■□□□□ -0
CACNB3-223ENST00000552480 LARP6Q9BRS8 491 aaKnown RBP15.02■□□□□ -0
CACNB3-223ENST00000552480 NOL10Q9BSC4 688 aaKnown RBP15.02■□□□□ -0
CACNB3-223ENST00000552480 AATFQ9NY61 560 aaKnown RBP eCLIP15.02■□□□□ -0
CACNB3-223ENST00000552480 ZNF219Q9P2Y4 722 aaPredicted RBP15.02■□□□□ -0
CACNB3-223ENST00000552480 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.02■□□□□ -0
CACNB3-223ENST00000552480 CHD4Q14839 1912 aa15.02□□□□□ -0.01
CACNB3-223ENST00000552480 LAMB1P07942 1786 aa15.01□□□□□ -0.01
CACNB3-223ENST00000552480 BAG3O95817 575 aa15.01□□□□□ -0.01
CACNB3-223ENST00000552480 KCNA3P22001 575 aa15.01□□□□□ -0.01
CACNB3-223ENST00000552480 PPP4CP60510 307 aa15.01□□□□□ -0.01
CACNB3-223ENST00000552480 NUCB2P80303 420 aa15.01□□□□□ -0.01
CACNB3-223ENST00000552480 FGD1P98174 961 aa15.01□□□□□ -0.01
CACNB3-223ENST00000552480 R3HDM1Q15032 1099 aaKnown RBP15.01□□□□□ -0.01
CACNB3-223ENST00000552480 DOK7Q18PE1 504 aa15.01□□□□□ -0.01
CACNB3-223ENST00000552480 PODNQ7Z5L7 613 aa15.01□□□□□ -0.01
CACNB3-223ENST00000552480 STAG1Q8WVM7 1258 aa15.01□□□□□ -0.01
CACNB3-223ENST00000552480 CNNM2Q9H8M5 875 aa15.01□□□□□ -0.01
CACNB3-223ENST00000552480 ATP8A2Q9NTI2 1148 aa15.01□□□□□ -0.01
CACNB3-223ENST00000552480 ANAPC4Q9UJX5 808 aa15.01□□□□□ -0.01
CACNB3-223ENST00000552480 ATF5Q9Y2D1 282 aaPredicted RBP15.01□□□□□ -0.01
CACNB3-223ENST00000552480 NEDD4P46934 1319 aa15□□□□□ -0.01
CACNB3-223ENST00000552480 PRC1O43663 620 aa15□□□□□ -0.01
CACNB3-223ENST00000552480 ANTXR2P58335 489 aa15□□□□□ -0.01
CACNB3-223ENST00000552480 CTDSPL2Q05D32 466 aa15□□□□□ -0.01
CACNB3-223ENST00000552480 PPARAQ07869 468 aa15□□□□□ -0.01
CACNB3-223ENST00000552480 DIXDC1Q155Q3 683 aa15□□□□□ -0.01
CACNB3-223ENST00000552480 NFKBIBQ15653 356 aa15□□□□□ -0.01
CACNB3-223ENST00000552480 CCDC93Q567U6 631 aa15□□□□□ -0.01
CACNB3-223ENST00000552480 AKNAD1Q5T1N1 836 aa15□□□□□ -0.01
CACNB3-223ENST00000552480 CCDC83Q8IWF9 413 aa15□□□□□ -0.01
CACNB3-223ENST00000552480 BRF1Q92994 677 aa15□□□□□ -0.01
CACNB3-223ENST00000552480 FAM163AQ96GL9 167 aaPredicted RBP15□□□□□ -0.01
CACNB3-223ENST00000552480 LRRC2Q9BYS8 371 aa15□□□□□ -0.01
CACNB3-223ENST00000552480 RNF41Q9H4P4 317 aaPredicted RBP15□□□□□ -0.01
CACNB3-223ENST00000552480 MYH2Q9UKX2 1941 aa15□□□□□ -0.01
CACNB3-223ENST00000552480 ZNF646O15015 1829 aaPredicted RBP14.99□□□□□ -0.01
CACNB3-223ENST00000552480 GAKO14976 1311 aa14.99□□□□□ -0.01
CACNB3-223ENST00000552480 C21orf2O43822 256 aa14.99□□□□□ -0.01
CACNB3-223ENST00000552480 FKBP1AP62942 108 aaKnown RBP14.99□□□□□ -0.01
CACNB3-223ENST00000552480 KIAA2012Q0VF49 1180 aa14.99□□□□□ -0.01
CACNB3-223ENST00000552480 ST3GAL1Q11201 340 aa14.99□□□□□ -0.01
CACNB3-223ENST00000552480 RTKN2Q8IZC4 609 aa14.99□□□□□ -0.01
CACNB3-223ENST00000552480 FBXW7Q969H0 707 aa14.99□□□□□ -0.01
CACNB3-223ENST00000552480 ANP32EQ9BTT0 268 aa14.99□□□□□ -0.01
CACNB3-223ENST00000552480 KRT23Q9C075 422 aa14.99□□□□□ -0.01
CACNB3-223ENST00000552480 DCP1AQ9NPI6 582 aaPredicted RBP14.99□□□□□ -0.01
CACNB3-223ENST00000552480 SMC3Q9UQE7 1217 aa14.99□□□□□ -0.01
CACNB3-223ENST00000552480 GPR75-ASB3A0A0A6YYF3 556 aa14.98□□□□□ -0.01
CACNB3-223ENST00000552480 ECE2O60344 883 aa14.98□□□□□ -0.01
CACNB3-223ENST00000552480 PLCG2P16885 1265 aa14.98□□□□□ -0.01
CACNB3-223ENST00000552480 BTDP43251 543 aa14.98□□□□□ -0.01
CACNB3-223ENST00000552480 SBK1Q52WX2 424 aa14.98□□□□□ -0.01
CACNB3-223ENST00000552480 SOGA3Q5TF21 947 aa14.98□□□□□ -0.01
CACNB3-223ENST00000552480 CTR9Q6PD62 1173 aa14.98□□□□□ -0.01
CACNB3-223ENST00000552480 MFSD6Q6ZSS7 791 aa14.98□□□□□ -0.01
CACNB3-223ENST00000552480 CHST3Q7LGC8 479 aa14.98□□□□□ -0.01
CACNB3-223ENST00000552480 NECAB1Q8N987 351 aa14.98□□□□□ -0.01
CACNB3-223ENST00000552480 GTF3C6Q969F1 213 aa14.98□□□□□ -0.01
CACNB3-223ENST00000552480 PSMD1Q99460 953 aa14.98□□□□□ -0.01
CACNB3-223ENST00000552480 DBNDD1Q9H9R9 158 aa14.98□□□□□ -0.01
CACNB3-223ENST00000552480 ARPP21Q9UBL0 812 aaPredicted RBP14.98□□□□□ -0.01
CACNB3-223ENST00000552480 NAV1Q8NEY1 1877 aa14.97□□□□□ -0.01
CACNB3-223ENST00000552480 B4E1Z4 1266 aa14.97□□□□□ -0.01
CACNB3-223ENST00000552480 PFKFB2O60825 505 aa14.97□□□□□ -0.01
CACNB3-223ENST00000552480 PCP11498 1178 aaKnown RBP14.97□□□□□ -0.01
CACNB3-223ENST00000552480 EVCP57679 992 aa14.97□□□□□ -0.01
CACNB3-223ENST00000552480 APOBRQ0VD83 1088 aa14.97□□□□□ -0.01
CACNB3-223ENST00000552480 AOC3Q16853 763 aa14.97□□□□□ -0.01
CACNB3-223ENST00000552480 CERS5Q8N5B7 392 aa14.97□□□□□ -0.01
CACNB3-223ENST00000552480 SH3RF3Q8TEJ3 882 aaPredicted RBP14.97□□□□□ -0.01
CACNB3-223ENST00000552480 TNPO1Q92973 898 aaKnown RBP14.97□□□□□ -0.01
CACNB3-223ENST00000552480 ZNF274Q96GC6 653 aaPredicted RBP14.97□□□□□ -0.01
CACNB3-223ENST00000552480 TMEM87BQ96K49 555 aa14.97□□□□□ -0.01
CACNB3-223ENST00000552480 SGIP1Q9BQI5 828 aa14.97□□□□□ -0.01
CACNB3-223ENST00000552480 PIM2Q9P1W9 311 aa14.97□□□□□ -0.01
CACNB3-223ENST00000552480 TACC3Q9Y6A5 838 aa14.97□□□□□ -0.01
CACNB3-223ENST00000552480 MINDY4BA8MYZ0 360 aa14.96□□□□□ -0.01
CACNB3-223ENST00000552480 USP5P45974 858 aa14.96□□□□□ -0.01
CACNB3-223ENST00000552480 STK3Q13188 491 aa14.96□□□□□ -0.01
CACNB3-223ENST00000552480 NBR1Q14596 966 aa14.96□□□□□ -0.01
CACNB3-223ENST00000552480 DDX60LQ5H9U9 1706 aaKnown RBP14.96□□□□□ -0.01
CACNB3-223ENST00000552480 STRIP1Q5VSL9 837 aa14.96□□□□□ -0.01
CACNB3-223ENST00000552480 CYB5R4Q7L1T6 521 aa14.96□□□□□ -0.01
CACNB3-223ENST00000552480 CHMP4CQ96CF2 233 aa14.96□□□□□ -0.01
CACNB3-223ENST00000552480 MTA3Q9BTC8 594 aa14.96□□□□□ -0.01
CACNB3-223ENST00000552480 VPS33BQ9H267 617 aa14.96□□□□□ -0.01
CACNB3-223ENST00000552480 MKRN1Q9UHC7 482 aaKnown RBP14.96□□□□□ -0.01
CACNB3-223ENST00000552480 DAGLAQ9Y4D2 1042 aa14.96□□□□□ -0.01
CACNB3-223ENST00000552480 BAZ2AQ9UIF9 1905 aaKnown RBP14.96□□□□□ -0.02
CACNB3-223ENST00000552480 BRCA1P38398 1863 aaKnown RBP14.95□□□□□ -0.02
CACNB3-223ENST00000552480 USP17L12C9JPN9 530 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms