RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 CCNJLQ8IV13 435 aa6.83□□□□□ -1.32
CBX5-203ENST00000547872 MAP4K3Q8IVH8 894 aa6.83□□□□□ -1.32
CBX5-203ENST00000547872 EPS8L3Q8TE67 593 aaKnown RBP6.83□□□□□ -1.32
CBX5-203ENST00000547872 FBF1Q8TES7 1133 aa6.83□□□□□ -1.32
CBX5-203ENST00000547872 NACC1Q96RE7 527 aa6.83□□□□□ -1.32
CBX5-203ENST00000547872 TRAK1Q9UPV9 953 aa6.83□□□□□ -1.32
CBX5-203ENST00000547872 LRRIQ1Q96JM4 1722 aa6.83□□□□□ -1.32
CBX5-203ENST00000547872 SYCP2Q9BX26 1530 aa6.82□□□□□ -1.32
CBX5-203ENST00000547872 METTL12A8MUP2 240 aa6.82□□□□□ -1.32
CBX5-203ENST00000547872 LDHBP07195 334 aaKnown RBP6.82□□□□□ -1.32
CBX5-203ENST00000547872 ERCC3P19447 782 aa6.82□□□□□ -1.32
CBX5-203ENST00000547872 FGD1P98174 961 aa6.82□□□□□ -1.32
CBX5-203ENST00000547872 COL19A1Q14993 1142 aa6.82□□□□□ -1.32
CBX5-203ENST00000547872 EAPPQ56P03 285 aaPredicted RBP6.82□□□□□ -1.32
CBX5-203ENST00000547872 ADAMTSL4Q6UY14 1074 aa6.82□□□□□ -1.32
CBX5-203ENST00000547872 DNAJC14Q6Y2X3 702 aaPredicted RBP6.82□□□□□ -1.32
CBX5-203ENST00000547872 FBXO11Q86XK2 927 aa6.82□□□□□ -1.32
CBX5-203ENST00000547872 PPP4R2Q9NY27 417 aa6.82□□□□□ -1.32
CBX5-203ENST00000547872 SOX13Q9UN79 622 aa6.82□□□□□ -1.32
CBX5-203ENST00000547872 CLIP1P30622 1438 aa6.82□□□□□ -1.32
CBX5-203ENST00000547872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.82□□□□□ -1.32
CBX5-203ENST00000547872 IQGAP1P46940 1657 aa6.81□□□□□ -1.32
CBX5-203ENST00000547872 MLH3Q9UHC1 1453 aa6.81□□□□□ -1.32
CBX5-203ENST00000547872 A0A096LPE4 126 aa6.81□□□□□ -1.32
CBX5-203ENST00000547872 A0A1W2PPZ6 126 aa6.81□□□□□ -1.32
CBX5-203ENST00000547872 ARL4DP49703 201 aa6.81□□□□□ -1.32
CBX5-203ENST00000547872 GRIK4Q16099 956 aa6.81□□□□□ -1.32
CBX5-203ENST00000547872 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.81□□□□□ -1.32
CBX5-203ENST00000547872 PI16Q6UXB8 463 aa6.81□□□□□ -1.32
CBX5-203ENST00000547872 NPAS4Q8IUM7 802 aa6.81□□□□□ -1.32
CBX5-203ENST00000547872 TCF12Q99081 682 aa6.81□□□□□ -1.32
CBX5-203ENST00000547872 WWC3Q9ULE0 1092 aa6.81□□□□□ -1.32
CBX5-203ENST00000547872 SAMD9LQ8IVG5 1584 aa6.81□□□□□ -1.32
CBX5-203ENST00000547872 A2ML1A8K2U0 1454 aa6.8□□□□□ -1.32
CBX5-203ENST00000547872 KRBA1A5PL33 1030 aa6.8□□□□□ -1.32
CBX5-203ENST00000547872 FSCN2O14926 492 aa6.8□□□□□ -1.32
CBX5-203ENST00000547872 SYNMO15061 1565 aa6.8□□□□□ -1.32
CBX5-203ENST00000547872 DEAF1O75398 565 aaPredicted RBP6.8□□□□□ -1.32
CBX5-203ENST00000547872 GRIA4P48058 902 aa6.8□□□□□ -1.32
CBX5-203ENST00000547872 IKBKEQ14164 716 aa6.8□□□□□ -1.32
CBX5-203ENST00000547872 GRM2Q14416 872 aa6.8□□□□□ -1.32
CBX5-203ENST00000547872 SETDB1Q15047 1291 aa6.8□□□□□ -1.32
CBX5-203ENST00000547872 CDC42BPAQ5VT25 1732 aa6.8□□□□□ -1.32
CBX5-203ENST00000547872 SLC7A3Q8WY07 619 aa6.8□□□□□ -1.32
CBX5-203ENST00000547872 WNT8BQ93098 351 aa6.8□□□□□ -1.32
CBX5-203ENST00000547872 SETDB2Q96T68 719 aa6.8□□□□□ -1.32
CBX5-203ENST00000547872 CARD10Q9BWT7 1032 aa6.8□□□□□ -1.32
CBX5-203ENST00000547872 SEC31BQ9NQW1 1179 aa6.8□□□□□ -1.32
CBX5-203ENST00000547872 NPHP4O75161 1426 aaPredicted RBP6.79□□□□□ -1.32
CBX5-203ENST00000547872 TROQ12816 1431 aaPredicted RBP6.79□□□□□ -1.32
CBX5-203ENST00000547872 PRPF40AO75400 957 aaKnown RBP6.79□□□□□ -1.32
CBX5-203ENST00000547872 SPRED3Q2MJR0 410 aa6.79□□□□□ -1.32
CBX5-203ENST00000547872 PRPF40BQ6NWY9 871 aaKnown RBP6.79□□□□□ -1.32
CBX5-203ENST00000547872 KLHL23Q8NBE8 558 aa6.79□□□□□ -1.32
CBX5-203ENST00000547872 BCO2Q9BYV7 579 aa6.79□□□□□ -1.32
CBX5-203ENST00000547872 ABCB6Q9NP58 842 aa6.79□□□□□ -1.32
CBX5-203ENST00000547872 USP21Q9UK80 565 aa6.79□□□□□ -1.32
CBX5-203ENST00000547872 SPG7Q9UQ90 795 aa6.79□□□□□ -1.32
CBX5-203ENST00000547872 ATP7AQ04656 1500 aa6.79□□□□□ -1.32
CBX5-203ENST00000547872 LRRC7Q96NW7 1537 aa6.79□□□□□ -1.32
CBX5-203ENST00000547872 ROBO1Q9Y6N7 1651 aa6.78□□□□□ -1.32
CBX5-203ENST00000547872 TMEM238LA0A1B0GVL6 79 aa6.78□□□□□ -1.32
CBX5-203ENST00000547872 C9orf172C9J069 976 aa6.78□□□□□ -1.32
CBX5-203ENST00000547872 MFAP1P55081 439 aaKnown RBP6.78□□□□□ -1.32
CBX5-203ENST00000547872 IGF2-ASQ6U949 168 aa6.78□□□□□ -1.32
CBX5-203ENST00000547872 SHISA2Q6UWI4 295 aa6.78□□□□□ -1.32
CBX5-203ENST00000547872 VN1R5Q7Z5H4 357 aa6.78□□□□□ -1.32
CBX5-203ENST00000547872 CLEC4MQ9H2X3 399 aaPredicted RBP6.78□□□□□ -1.32
CBX5-203ENST00000547872 SPAG9O60271 1321 aaKnown RBP6.77□□□□□ -1.32
CBX5-203ENST00000547872 DLL1O00548 723 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 ITPKAP23677 461 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 CD68P34810 354 aaPredicted RBP6.77□□□□□ -1.33
CBX5-203ENST00000547872 CHRNA4P43681 627 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 FCGRTP55899 365 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 NRG1Q02297 640 aaPredicted RBP6.77□□□□□ -1.33
CBX5-203ENST00000547872 PCDH1Q08174 1060 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 C19orf57Q0VDD7 668 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 PLA2G4EQ3MJ16 856 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 MEX3CQ5U5Q3 659 aaKnown RBP6.77□□□□□ -1.33
CBX5-203ENST00000547872 NXPE4Q6UWF7 544 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 DTHD1Q6ZMT9 781 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 GALNT11Q8NCW6 608 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 LENG1Q96BZ8 264 aaPredicted RBP6.77□□□□□ -1.33
CBX5-203ENST00000547872 OSGEPQ9NPF4 335 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 TNRQ92752 1358 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 A2MP01023 1474 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 PLXNC1O60486 1568 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 UGGT1Q9NYU2 1555 aa6.77□□□□□ -1.33
CBX5-203ENST00000547872 INO80Q9ULG1 1556 aaPredicted RBP6.77□□□□□ -1.33
CBX5-203ENST00000547872 PHLPP1O60346 1717 aa6.76□□□□□ -1.33
CBX5-203ENST00000547872 C1QTNF9BB2RNN3 333 aa6.76□□□□□ -1.33
CBX5-203ENST00000547872 SOX1O00570 391 aaPredicted RBP6.76□□□□□ -1.33
CBX5-203ENST00000547872 GIPC1O14908 333 aa6.76□□□□□ -1.33
CBX5-203ENST00000547872 ESRRAP11474 423 aaPredicted RBP6.76□□□□□ -1.33
CBX5-203ENST00000547872 SELPP16109 830 aa6.76□□□□□ -1.33
CBX5-203ENST00000547872 HNRNPMP52272 730 aaKnown RBP eCLIP6.76□□□□□ -1.33
CBX5-203ENST00000547872 PTPN12Q05209 780 aaKnown RBP6.76□□□□□ -1.33
CBX5-203ENST00000547872 SUZ12Q15022 739 aaKnown RBP6.76□□□□□ -1.33
CBX5-203ENST00000547872 CD163Q86VB7 1156 aa6.76□□□□□ -1.33
CBX5-203ENST00000547872 ANKLE2Q86XL3 938 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms