RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 BTDP43251 543 aa25.2■■□□□ 1.62
SCARB1-211ENST00000546215 SLC9C2Q5TAH2 1124 aa25.2■■□□□ 1.62
SCARB1-211ENST00000546215 CDC42EP5Q6NZY7 148 aa25.2■■□□□ 1.62
SCARB1-211ENST00000546215 USP48Q86UV5 1035 aa25.2■■□□□ 1.62
SCARB1-211ENST00000546215 SULF1Q8IWU6 871 aa25.2■■□□□ 1.62
SCARB1-211ENST00000546215 KBTBD3Q8NAB2 608 aa25.2■■□□□ 1.62
SCARB1-211ENST00000546215 PDE6AP16499 860 aa25.19■■□□□ 1.62
SCARB1-211ENST00000546215 CYP7A1P22680 504 aa25.19■■□□□ 1.62
SCARB1-211ENST00000546215 APOBEC3FQ8IUX4 373 aaKnown RBP25.19■■□□□ 1.62
SCARB1-211ENST00000546215 VEZTQ9HBM0 779 aa25.19■■□□□ 1.62
SCARB1-211ENST00000546215 TCRBV5S4A2TA0A5A2 114 aa25.18■■□□□ 1.62
SCARB1-211ENST00000546215 ADM5C9JUS6 153 aa25.18■■□□□ 1.62
SCARB1-211ENST00000546215 DLK2Q6UY11 383 aa25.18■■□□□ 1.62
SCARB1-211ENST00000546215 USP40Q9NVE5 1235 aa25.18■■□□□ 1.62
SCARB1-211ENST00000546215 TRAF5O00463 557 aa25.18■■□□□ 1.62
SCARB1-211ENST00000546215 ADD2P35612 726 aa25.18■■□□□ 1.62
SCARB1-211ENST00000546215 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.18■■□□□ 1.621e-8■■■■□ 21.3
SCARB1-211ENST00000546215 PASKQ96RG2 1323 aa25.17■■□□□ 1.62
SCARB1-211ENST00000546215 ZNF532Q9HCE3 1301 aa25.17■■□□□ 1.62
SCARB1-211ENST00000546215 CACNB3P54284 484 aa25.17■■□□□ 1.62
SCARB1-211ENST00000546215 RHBDL3P58872 404 aa25.17■■□□□ 1.62
SCARB1-211ENST00000546215 PPP4CP60510 307 aa25.17■■□□□ 1.62
SCARB1-211ENST00000546215 C1QTNF8P60827 252 aa25.17■■□□□ 1.62
SCARB1-211ENST00000546215 MYH7P12883 1935 aa25.16■■□□□ 1.62
SCARB1-211ENST00000546215 CHGBP05060 677 aa25.16■■□□□ 1.62
SCARB1-211ENST00000546215 FMR1Q06787 632 aaKnown RBP eCLIP25.16■■□□□ 1.62
SCARB1-211ENST00000546215 SLFNL1Q499Z3 407 aa25.16■■□□□ 1.62
SCARB1-211ENST00000546215 FKBP1CQ5VVH2 108 aa25.16■■□□□ 1.62
SCARB1-211ENST00000546215 AATFQ9NY61 560 aaKnown RBP eCLIP25.16■■□□□ 1.626e-8■■■□□ 16.7
SCARB1-211ENST00000546215 EVI5LQ96CN4 794 aa25.15■■□□□ 1.62
SCARB1-211ENST00000546215 DEFB129Q9H1M3 183 aa25.15■■□□□ 1.62
SCARB1-211ENST00000546215 TMOD2Q9NZR1 351 aa25.15■■□□□ 1.62
SCARB1-211ENST00000546215 TCP10L2B9ZVM9 353 aa25.14■■□□□ 1.62
SCARB1-211ENST00000546215 BAG3O95817 575 aa25.14■■□□□ 1.62
SCARB1-211ENST00000546215 UBE3CQ15386 1083 aa25.14■■□□□ 1.62
SCARB1-211ENST00000546215 ZSCAN25Q6NSZ9 544 aa25.14■■□□□ 1.62
SCARB1-211ENST00000546215 NFIAQ12857 509 aa25.14■■□□□ 1.61
SCARB1-211ENST00000546215 TNFAIP1Q13829 316 aa25.14■■□□□ 1.61
SCARB1-211ENST00000546215 RASA3Q14644 834 aa25.14■■□□□ 1.61
SCARB1-211ENST00000546215 SKAP1Q86WV1 359 aa25.14■■□□□ 1.61
SCARB1-211ENST00000546215 MIGA1Q8NAN2 632 aa25.14■■□□□ 1.61
SCARB1-211ENST00000546215 NOL10Q9BSC4 688 aaKnown RBP25.14■■□□□ 1.61
SCARB1-211ENST00000546215 WDHD1O75717 1129 aaPredicted RBP25.13■■□□□ 1.61
SCARB1-211ENST00000546215 PRAMEF18Q5VWM3 479 aa25.13■■□□□ 1.61
SCARB1-211ENST00000546215 FSD1Q9BTV5 496 aa25.13■■□□□ 1.61
SCARB1-211ENST00000546215 IDI2Q9BXS1 227 aa25.13■■□□□ 1.61
SCARB1-211ENST00000546215 CNTNAP1P78357 1384 aa25.12■■□□□ 1.61
SCARB1-211ENST00000546215 TRIM6-TRIM34B2RNG4 842 aa25.12■■□□□ 1.61
SCARB1-211ENST00000546215 DYNLL1P63167 89 aaKnown RBP25.12■■□□□ 1.61
SCARB1-211ENST00000546215 FAM83AQ86UY5 434 aa25.12■■□□□ 1.61
SCARB1-211ENST00000546215 SH3RF3Q8TEJ3 882 aaPredicted RBP25.12■■□□□ 1.61
SCARB1-211ENST00000546215 FAM198AQ9UFP1 575 aa25.12■■□□□ 1.61
SCARB1-211ENST00000546215 PPP2R3BQ9Y5P8 575 aa25.12■■□□□ 1.61
SCARB1-211ENST00000546215 RFX7Q2KHR2 1363 aa25.12■■□□□ 1.61
SCARB1-211ENST00000546215 RNF113AO15541 343 aaKnown RBP25.11■■□□□ 1.61
SCARB1-211ENST00000546215 PLCG2P16885 1265 aa25.11■■□□□ 1.61
SCARB1-211ENST00000546215 TNNI2P48788 182 aa25.11■■□□□ 1.61
SCARB1-211ENST00000546215 TTC22Q5TAA0 569 aa25.11■■□□□ 1.61
SCARB1-211ENST00000546215 CDCA5Q96FF9 252 aa25.11■■□□□ 1.61
SCARB1-211ENST00000546215 RIOK1Q9BRS2 568 aaKnown RBP25.11■■□□□ 1.61
SCARB1-211ENST00000546215 ZFYP08048 801 aaPredicted RBP25.1■■□□□ 1.61
SCARB1-211ENST00000546215 GSPT1P15170 499 aaKnown RBP25.1■■□□□ 1.61
SCARB1-211ENST00000546215 CERS3Q8IU89 383 aa25.1■■□□□ 1.61
SCARB1-211ENST00000546215 LRRFIP1Q32MZ4 808 aaKnown RBP25.1■■□□□ 1.61
SCARB1-211ENST00000546215 CST9Q5W186 159 aa25.1■■□□□ 1.61
SCARB1-211ENST00000546215 RILPL2Q969X0 211 aa25.1■■□□□ 1.61
SCARB1-211ENST00000546215 TMEM39BQ9GZU3 492 aa25.1■■□□□ 1.61
SCARB1-211ENST00000546215 DDX4Q9NQI0 724 aaKnown RBP25.1■■□□□ 1.61
SCARB1-211ENST00000546215 TRPM7Q96QT4 1865 aa25.09■■□□□ 1.61
SCARB1-211ENST00000546215 MAGEB6P1A0A0J9YX57 407 aa25.09■■□□□ 1.61
SCARB1-211ENST00000546215 RGS3P49796 1198 aa25.09■■□□□ 1.61
SCARB1-211ENST00000546215 TCP10Q12799 353 aa25.09■■□□□ 1.61
SCARB1-211ENST00000546215 TEX11Q8IYF3 940 aa25.09■■□□□ 1.61
SCARB1-211ENST00000546215 FAM151AQ8WW52 585 aa25.09■■□□□ 1.61
SCARB1-211ENST00000546215 TEPSINQ96N21 525 aa25.09■■□□□ 1.61
SCARB1-211ENST00000546215 NPM3O75607 178 aaKnown RBP25.08■■□□□ 1.61
SCARB1-211ENST00000546215 TICAM2Q86XR7 235 aa25.08■■□□□ 1.61
SCARB1-211ENST00000546215 ZFPM1Q8IX07 1006 aa25.08■■□□□ 1.61
SCARB1-211ENST00000546215 PUS7LQ9H0K6 701 aaKnown RBP25.08■■□□□ 1.61
SCARB1-211ENST00000546215 ENTPD3O75355 529 aa25.07■■□□□ 1.6
SCARB1-211ENST00000546215 CELF2O95319 508 aaKnown RBP25.07■■□□□ 1.6
SCARB1-211ENST00000546215 APLP1P51693 650 aa25.07■■□□□ 1.6
SCARB1-211ENST00000546215 CDAN1Q8IWY9 1227 aa25.07■■□□□ 1.6
SCARB1-211ENST00000546215 APPBP2Q92624 585 aa25.07■■□□□ 1.6
SCARB1-211ENST00000546215 OSBP2Q969R2 916 aa25.07■■□□□ 1.6
SCARB1-211ENST00000546215 CDK5RAP2Q96SN8 1893 aa25.06■■□□□ 1.6
SCARB1-211ENST00000546215 PICALMQ13492 652 aa25.06■■□□□ 1.6
SCARB1-211ENST00000546215 NBPF12Q5TAG4 269 aaPredicted RBP25.06■■□□□ 1.6
SCARB1-211ENST00000546215 LCORLQ8N3X6 602 aa25.06■■□□□ 1.6
SCARB1-211ENST00000546215 TGFBRAP1Q8WUH2 860 aa25.06■■□□□ 1.6
SCARB1-211ENST00000546215 ZNF408Q9H9D4 720 aa25.06■■□□□ 1.6
SCARB1-211ENST00000546215 AK9Q5TCS8 1911 aa25.05■■□□□ 1.6
SCARB1-211ENST00000546215 MBD4O95243 580 aa25.05■■□□□ 1.6
SCARB1-211ENST00000546215 SDSP20132 328 aa25.05■■□□□ 1.6
SCARB1-211ENST00000546215 ZMYM1Q5SVZ6 1142 aa25.05■■□□□ 1.6
SCARB1-211ENST00000546215 ARMT1Q9H993 441 aa25.05■■□□□ 1.6
SCARB1-211ENST00000546215 FOCADQ5VW36 1801 aa25.04■■□□□ 1.6
SCARB1-211ENST00000546215 RPAP1Q9BWH6 1393 aaPredicted RBP25.04■■□□□ 1.6
SCARB1-211ENST00000546215 TMEM88BA6NKF7 163 aa25.04■■□□□ 1.6
SCARB1-211ENST00000546215 HSPA6P17066 643 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms