RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 COL6A3P12111 3177 aa5.66□□□□□ -1.5
TSG101-205ENST00000540555 LOC105371045A0A1W2PR82 267 aa5.66□□□□□ -1.5
TSG101-205ENST00000540555 PTCD1O75127 700 aaKnown RBP5.66□□□□□ -1.5
TSG101-205ENST00000540555 PDIA4P13667 645 aaKnown RBP5.66□□□□□ -1.5
TSG101-205ENST00000540555 TATP17735 454 aaPredicted RBP5.66□□□□□ -1.5
TSG101-205ENST00000540555 NAA30Q147X3 362 aaPredicted RBP5.66□□□□□ -1.5
TSG101-205ENST00000540555 RTN1Q16799 776 aa5.66□□□□□ -1.5
TSG101-205ENST00000540555 HABP4Q5JVS0 413 aaKnown RBP5.66□□□□□ -1.5
TSG101-205ENST00000540555 RIPOR1Q6ZS17 1223 aa5.66□□□□□ -1.5
TSG101-205ENST00000540555 TRIM22Q8IYM9 498 aa5.66□□□□□ -1.5
TSG101-205ENST00000540555 NANOS1Q8WY41 292 aaKnown RBP5.66□□□□□ -1.5
TSG101-205ENST00000540555 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.66□□□□□ -1.5
TSG101-205ENST00000540555 GPC6Q9Y625 555 aaPredicted RBP5.66□□□□□ -1.5
TSG101-205ENST00000540555 KIF13BQ9NQT8 1826 aa5.66□□□□□ -1.5
TSG101-205ENST00000540555 NFAT5O94916 1531 aa5.65□□□□□ -1.5
TSG101-205ENST00000540555 ZBTB7CA1YPR0 619 aa5.65□□□□□ -1.5
TSG101-205ENST00000540555 MMP10P09238 476 aa5.65□□□□□ -1.5
TSG101-205ENST00000540555 KCNMA1Q12791 1236 aa5.65□□□□□ -1.5
TSG101-205ENST00000540555 DALRD3Q5D0E6 543 aaKnown RBP5.65□□□□□ -1.5
TSG101-205ENST00000540555 ARSJQ5FYB0 599 aaPredicted RBP5.65□□□□□ -1.5
TSG101-205ENST00000540555 FAM26DQ5JW98 314 aa5.65□□□□□ -1.5
TSG101-205ENST00000540555 C16orf46Q6P387 395 aa5.65□□□□□ -1.5
TSG101-205ENST00000540555 SMIM5Q71RC9 77 aa5.65□□□□□ -1.5
TSG101-205ENST00000540555 NLRP8Q86W28 1048 aa5.65□□□□□ -1.5
TSG101-205ENST00000540555 VWA5B2Q8N398 1253 aa5.65□□□□□ -1.5
TSG101-205ENST00000540555 ZNF280CQ8ND82 737 aa5.65□□□□□ -1.5
TSG101-205ENST00000540555 RHPN1Q8TCX5 695 aa5.65□□□□□ -1.5
TSG101-205ENST00000540555 VTI1AQ96AJ9 217 aa5.65□□□□□ -1.5
TSG101-205ENST00000540555 ZNF837Q96EG3 531 aaPredicted RBP5.65□□□□□ -1.5
TSG101-205ENST00000540555 GMCL1Q96IK5 515 aa5.65□□□□□ -1.5
TSG101-205ENST00000540555 PIM2Q9P1W9 311 aa5.65□□□□□ -1.5
TSG101-205ENST00000540555 PITPNM2Q9BZ72 1349 aa5.65□□□□□ -1.51
TSG101-205ENST00000540555 THSD7BQ9C0I4 1608 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 H7C1W4 665 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 DLL1O00548 723 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 TNFRSF10BO14763 440 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 LMNB1P20700 586 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 ARID4AP29374 1257 aaPredicted RBP5.64□□□□□ -1.51
TSG101-205ENST00000540555 FXR1P51114 621 aaKnown RBP eCLIP5.64□□□□□ -1.51
TSG101-205ENST00000540555 DGKZQ13574 1117 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 LBRQ14739 615 aaKnown RBP5.64□□□□□ -1.51
TSG101-205ENST00000540555 B4GALNT3Q6L9W6 998 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 BICDL1Q6ZP65 573 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 PGBD3Q8N328 593 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 KCTD17Q8N5Z5 321 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 GPR161Q8N6U8 529 aaKnown RBP5.64□□□□□ -1.51
TSG101-205ENST00000540555 HSH2DQ96JZ2 352 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 SUSD3Q96L08 255 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 ZCCHC2Q9C0B9 1178 aaKnown RBP5.64□□□□□ -1.51
TSG101-205ENST00000540555 NUCKS1Q9H1E3 243 aaKnown RBP5.64□□□□□ -1.51
TSG101-205ENST00000540555 KLK14Q9P0G3 267 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 HCN2Q9UL51 889 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 TOGARAM1Q9Y4F4 1720 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 ERBB4Q15303 1308 aa5.64□□□□□ -1.51
TSG101-205ENST00000540555 WDR33Q9C0J8 1336 aaKnown RBP5.64□□□□□ -1.51
TSG101-205ENST00000540555 CA12O43570 354 aa5.63□□□□□ -1.51
TSG101-205ENST00000540555 DEFB115Q30KQ5 88 aa5.63□□□□□ -1.51
TSG101-205ENST00000540555 C11orf91Q3C1V1 193 aa5.63□□□□□ -1.51
TSG101-205ENST00000540555 EFHC2Q5JST6 749 aa5.63□□□□□ -1.51
TSG101-205ENST00000540555 LRRC69Q6ZNQ3 347 aa5.63□□□□□ -1.51
TSG101-205ENST00000540555 NLGN1Q8N2Q7 840 aa5.63□□□□□ -1.51
TSG101-205ENST00000540555 DDX54Q8TDD1 881 aaKnown RBP5.63□□□□□ -1.51
TSG101-205ENST00000540555 GTF3C2Q8WUA4 911 aaPredicted RBP5.63□□□□□ -1.51
TSG101-205ENST00000540555 SYTL4Q96C24 671 aaPredicted RBP5.63□□□□□ -1.51
TSG101-205ENST00000540555 NDFIP2Q9NV92 336 aa5.63□□□□□ -1.51
TSG101-205ENST00000540555 CCDC87Q9NVE4 849 aa5.63□□□□□ -1.51
TSG101-205ENST00000540555 NLRP2Q9NX02 1062 aa5.63□□□□□ -1.51
TSG101-205ENST00000540555 DMGDHQ9UI17 866 aaKnown RBP5.63□□□□□ -1.51
TSG101-205ENST00000540555 GNEQ9Y223 722 aaKnown RBP5.63□□□□□ -1.51
TSG101-205ENST00000540555 DNMT3AQ9Y6K1 912 aaPredicted RBP5.63□□□□□ -1.51
TSG101-205ENST00000540555 PALLDQ8WX93 1383 aa5.63□□□□□ -1.51
TSG101-205ENST00000540555 RANBP2P49792 3224 aaKnown RBP5.63□□□□□ -1.51
TSG101-205ENST00000540555 VIRMAQ69YN4 1812 aaKnown RBP5.62□□□□□ -1.51
TSG101-205ENST00000540555 BNIP3LO60238 219 aa5.62□□□□□ -1.51
TSG101-205ENST00000540555 SERPINB4P48594 390 aa5.62□□□□□ -1.51
TSG101-205ENST00000540555 ECM1Q16610 540 aa5.62□□□□□ -1.51
TSG101-205ENST00000540555 SAMD5Q5TGI4 173 aa5.62□□□□□ -1.51
TSG101-205ENST00000540555 SV2AQ7L0J3 742 aa5.62□□□□□ -1.51
TSG101-205ENST00000540555 LDHDQ86WU2 507 aa5.62□□□□□ -1.51
TSG101-205ENST00000540555 HELQQ8TDG4 1101 aa5.62□□□□□ -1.51
TSG101-205ENST00000540555 GTPBP3Q969Y2 492 aaKnown RBP5.62□□□□□ -1.51
TSG101-205ENST00000540555 C5P01031 1676 aa5.62□□□□□ -1.51
TSG101-205ENST00000540555 CDC14CA4D256 554 aa5.61□□□□□ -1.51
TSG101-205ENST00000540555 ZBTB39O15060 712 aa5.61□□□□□ -1.51
TSG101-205ENST00000540555 C4BP0C0L5 1744 aa5.61□□□□□ -1.51
TSG101-205ENST00000540555 BRCA1P38398 1863 aaKnown RBP5.61□□□□□ -1.51
TSG101-205ENST00000540555 RASSF7Q02833 373 aa5.61□□□□□ -1.51
TSG101-205ENST00000540555 KCNA1Q09470 495 aa5.61□□□□□ -1.51
TSG101-205ENST00000540555 MTMR3Q13615 1198 aa5.61□□□□□ -1.51
TSG101-205ENST00000540555 ETFBKMTQ8IXQ9 262 aa5.61□□□□□ -1.51
TSG101-205ENST00000540555 TTC21AQ8NDW8 1320 aa5.61□□□□□ -1.51
TSG101-205ENST00000540555 ANKRD24Q8TF21 1146 aa5.61□□□□□ -1.51
TSG101-205ENST00000540555 IFT43Q96FT9 208 aa5.61□□□□□ -1.51
TSG101-205ENST00000540555 ANKIB1Q9P2G1 1089 aa5.61□□□□□ -1.51
TSG101-205ENST00000540555 PCDHGC4Q9Y5F7 938 aa5.61□□□□□ -1.51
TSG101-205ENST00000540555 ARFGEF1Q9Y6D6 1849 aa5.61□□□□□ -1.51
TSG101-205ENST00000540555 LTBP1Q14766 1721 aa5.6□□□□□ -1.51
TSG101-205ENST00000540555 USP31Q70CQ4 1352 aa5.6□□□□□ -1.51
TSG101-205ENST00000540555 TTC21BQ7Z4L5 1316 aa5.6□□□□□ -1.51
TSG101-205ENST00000540555 TGFBR3LH3BV60 316 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms