RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ZC3H12CQ9C0D7 883 aaKnown RBP19.97■□□□□ 0.79
COPS3-212ENST00000539941 HAND2P61296 217 aa19.97■□□□□ 0.79
COPS3-212ENST00000539941 COL9A3Q14050 684 aaPredicted RBP19.97■□□□□ 0.79
COPS3-212ENST00000539941 SLX4Q8IY92 1834 aa19.96■□□□□ 0.79
COPS3-212ENST00000539941 TIAM2Q8IVF5 1701 aa19.96■□□□□ 0.79
COPS3-212ENST00000539941 TRDNQ13061 729 aa19.96■□□□□ 0.79
COPS3-212ENST00000539941 Q6ZUG5 572 aa19.96■□□□□ 0.79
COPS3-212ENST00000539941 RALYLQ86SE5 291 aaKnown RBP19.96■□□□□ 0.79
COPS3-212ENST00000539941 CERS3Q8IU89 383 aa19.96■□□□□ 0.79
COPS3-212ENST00000539941 TPCN1Q9ULQ1 816 aa19.96■□□□□ 0.79
COPS3-212ENST00000539941 PRKAB2O43741 272 aa19.95■□□□□ 0.78
COPS3-212ENST00000539941 LDHCP07864 332 aa19.95■□□□□ 0.78
COPS3-212ENST00000539941 CHRNA5P30532 468 aa19.95■□□□□ 0.78
COPS3-212ENST00000539941 TDO2P48775 406 aa19.95■□□□□ 0.78
COPS3-212ENST00000539941 ME3Q16798 604 aa19.95■□□□□ 0.78
COPS3-212ENST00000539941 GRIPAP1Q4V328 841 aa19.95■□□□□ 0.78
COPS3-212ENST00000539941 MB21D2Q8IYB1 491 aaPredicted RBP19.95■□□□□ 0.78
COPS3-212ENST00000539941 TCEANC2Q96MN5 208 aa19.95■□□□□ 0.78
COPS3-212ENST00000539941 KIF13BQ9NQT8 1826 aa19.95■□□□□ 0.78
COPS3-212ENST00000539941 YBX3P16989 372 aaKnown RBP eCLIP19.94■□□□□ 0.784e-7■■■□□ 18.9
COPS3-212ENST00000539941 MCM5P33992 734 aa19.94■□□□□ 0.78
COPS3-212ENST00000539941 FGD1P98174 961 aa19.94■□□□□ 0.78
COPS3-212ENST00000539941 RTFDC1Q9BY42 306 aaPredicted RBP19.94■□□□□ 0.78
COPS3-212ENST00000539941 NBPF3Q9H094 633 aa19.94■□□□□ 0.78
COPS3-212ENST00000539941 SUGT1Q9Y2Z0 365 aa19.94■□□□□ 0.78
COPS3-212ENST00000539941 LARGE1O95461 756 aa19.94■□□□□ 0.78
COPS3-212ENST00000539941 C7orf43Q8WVR3 580 aa19.94■□□□□ 0.78
COPS3-212ENST00000539941 CRNKL1Q9BZJ0 848 aaKnown RBP19.94■□□□□ 0.78
COPS3-212ENST00000539941 JAG2Q9Y219 1238 aa19.94■□□□□ 0.78
COPS3-212ENST00000539941 CHD4Q14839 1912 aa19.93■□□□□ 0.78
COPS3-212ENST00000539941 OLFM4Q6UX06 510 aa19.93■□□□□ 0.78
COPS3-212ENST00000539941 TBC1D10CQ8IV04 446 aa19.93■□□□□ 0.78
COPS3-212ENST00000539941 SLF2Q8IX21 1173 aa19.93■□□□□ 0.78
COPS3-212ENST00000539941 LARP6Q9BRS8 491 aaKnown RBP19.93■□□□□ 0.78
COPS3-212ENST00000539941 CNNM2Q9H8M5 875 aa19.93■□□□□ 0.78
COPS3-212ENST00000539941 RIMBP2O15034 1052 aa19.92■□□□□ 0.78
COPS3-212ENST00000539941 DYNLL1P63167 89 aaKnown RBP19.92■□□□□ 0.78
COPS3-212ENST00000539941 CHMP4CQ96CF2 233 aa19.92■□□□□ 0.78
COPS3-212ENST00000539941 ANAPC4Q9UJX5 808 aa19.92■□□□□ 0.78
COPS3-212ENST00000539941 SNED1Q8TER0 1413 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 BAG3O95817 575 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 PPP4CP60510 307 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 MFSD14BQ5SR56 506 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 CCDC83Q8IWF9 413 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 SUPT20HQ8NEM7 779 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 STAG1Q8WVM7 1258 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 TNPO1Q92973 898 aaKnown RBP19.91■□□□□ 0.78
COPS3-212ENST00000539941 BRF1Q92994 677 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 RNF41Q9H4P4 317 aaPredicted RBP19.91■□□□□ 0.78
COPS3-212ENST00000539941 ATP8A2Q9NTI2 1148 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 AATFQ9NY61 560 aaKnown RBP eCLIP19.91■□□□□ 0.78
COPS3-212ENST00000539941 SMC3Q9UQE7 1217 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 PRC1O43663 620 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 EVCP57679 992 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 AKNAD1Q5T1N1 836 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 PODNQ7Z5L7 613 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 SDR42E1Q8WUS8 393 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 FAM163AQ96GL9 167 aaPredicted RBP19.91■□□□□ 0.78
COPS3-212ENST00000539941 NOL10Q9BSC4 688 aaKnown RBP19.91■□□□□ 0.78
COPS3-212ENST00000539941 KRT23Q9C075 422 aa19.91■□□□□ 0.78
COPS3-212ENST00000539941 MROH7-TTC4A0A0A0MT08 1334 aa19.9■□□□□ 0.78
COPS3-212ENST00000539941 PCP11498 1178 aaKnown RBP19.9■□□□□ 0.78
COPS3-212ENST00000539941 PDIA4P13667 645 aaKnown RBP19.9■□□□□ 0.78
COPS3-212ENST00000539941 PPARAQ07869 468 aa19.9■□□□□ 0.78
COPS3-212ENST00000539941 CLEC17AQ6ZS10 378 aa19.9■□□□□ 0.78
COPS3-212ENST00000539941 TTLL6Q8N841 843 aa19.9■□□□□ 0.78
COPS3-212ENST00000539941 GTF3C6Q969F1 213 aa19.9■□□□□ 0.78
COPS3-212ENST00000539941 GBP4Q96PP9 640 aa19.9■□□□□ 0.78
COPS3-212ENST00000539941 MYH2Q9UKX2 1941 aa19.89■□□□□ 0.78
COPS3-212ENST00000539941 G3V3G9 751 aa19.89■□□□□ 0.77
COPS3-212ENST00000539941 GTF2IP78347 998 aa19.89■□□□□ 0.77
COPS3-212ENST00000539941 ST3GAL1Q11201 340 aa19.89■□□□□ 0.77
COPS3-212ENST00000539941 DCAF8Q5TAQ9 597 aa19.89■□□□□ 0.77
COPS3-212ENST00000539941 MFSD6Q6ZSS7 791 aa19.89■□□□□ 0.77
COPS3-212ENST00000539941 ZNF274Q96GC6 653 aaPredicted RBP19.89■□□□□ 0.77
COPS3-212ENST00000539941 LRRC2Q9BYS8 371 aa19.89■□□□□ 0.77
COPS3-212ENST00000539941 GRIN3BO60391 1043 aa19.88■□□□□ 0.77
COPS3-212ENST00000539941 PFKFB2O60825 505 aa19.88■□□□□ 0.77
COPS3-212ENST00000539941 ANTXR2P58335 489 aa19.88■□□□□ 0.77
COPS3-212ENST00000539941 GRIK5Q16478 980 aa19.88■□□□□ 0.77
COPS3-212ENST00000539941 TMEM87BQ96K49 555 aa19.88■□□□□ 0.77
COPS3-212ENST00000539941 MTA3Q9BTC8 594 aa19.88■□□□□ 0.77
COPS3-212ENST00000539941 PLCG2P16885 1265 aa19.87■□□□□ 0.77
COPS3-212ENST00000539941 NECAB1Q8N987 351 aa19.87■□□□□ 0.77
COPS3-212ENST00000539941 DCP1AQ9NPI6 582 aaPredicted RBP19.87■□□□□ 0.77
COPS3-212ENST00000539941 GAKO14976 1311 aa19.87■□□□□ 0.77
COPS3-212ENST00000539941 NEDD4P46934 1319 aa19.87■□□□□ 0.77
COPS3-212ENST00000539941 GPR75-ASB3A0A0A6YYF3 556 aa19.87■□□□□ 0.77
COPS3-212ENST00000539941 TGFB2P61812 414 aa19.87■□□□□ 0.77
COPS3-212ENST00000539941 FKBP1AP62942 108 aaKnown RBP19.87■□□□□ 0.77
COPS3-212ENST00000539941 CTDSPL2Q05D32 466 aa19.87■□□□□ 0.77
COPS3-212ENST00000539941 DIXDC1Q155Q3 683 aa19.87■□□□□ 0.77
COPS3-212ENST00000539941 SBK1Q52WX2 424 aa19.87■□□□□ 0.77
COPS3-212ENST00000539941 LLPHQ9BRT6 129 aaKnown RBP19.87■□□□□ 0.77
COPS3-212ENST00000539941 ARPP21Q9UBL0 812 aaPredicted RBP19.87■□□□□ 0.77
COPS3-212ENST00000539941 LAMB1P07942 1786 aa19.86■□□□□ 0.77
COPS3-212ENST00000539941 BRD1O95696 1058 aa19.86■□□□□ 0.77
COPS3-212ENST00000539941 MCM4P33991 863 aa19.86■□□□□ 0.77
COPS3-212ENST00000539941 APOBRQ0VD83 1088 aa19.86■□□□□ 0.77
COPS3-212ENST00000539941 DOK7Q18PE1 504 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms