RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 DACH1Q9UI36 760 aa15.28■□□□□ 0.04
UBE3B-209ENST00000539584 WDHD1O75717 1129 aaPredicted RBP15.27■□□□□ 0.04
UBE3B-209ENST00000539584 HAND2P61296 217 aa15.27■□□□□ 0.04
UBE3B-209ENST00000539584 IFIT5Q13325 482 aaKnown RBP15.27■□□□□ 0.04
UBE3B-209ENST00000539584 GNL2Q13823 731 aaKnown RBP15.27■□□□□ 0.04
UBE3B-209ENST00000539584 CT47A1Q5JQC4 288 aaPredicted RBP15.27■□□□□ 0.04
UBE3B-209ENST00000539584 SGMS1Q86VZ5 419 aa15.27■□□□□ 0.04
UBE3B-209ENST00000539584 MPHOSPH8Q99549 860 aa15.27■□□□□ 0.04
UBE3B-209ENST00000539584 PUS3Q9BZE2 481 aaKnown RBP15.27■□□□□ 0.04
UBE3B-209ENST00000539584 PUS7LQ9H0K6 701 aaKnown RBP15.27■□□□□ 0.04
UBE3B-209ENST00000539584 TNS3Q68CZ2 1445 aa15.27■□□□□ 0.04
UBE3B-209ENST00000539584 SH2B2O14492 632 aaPredicted RBP15.27■□□□□ 0.03
UBE3B-209ENST00000539584 TOP1P11387 765 aaKnown RBP15.27■□□□□ 0.03
UBE3B-209ENST00000539584 ATF3P18847 181 aa15.27■□□□□ 0.03
UBE3B-209ENST00000539584 LMOD1P29536 600 aaPredicted RBP15.27■□□□□ 0.03
UBE3B-209ENST00000539584 ADD2P35612 726 aa15.27■□□□□ 0.03
UBE3B-209ENST00000539584 KRT40Q6A162 431 aa15.27■□□□□ 0.03
UBE3B-209ENST00000539584 TEX13AQ9BXU3 409 aaPredicted RBP15.27■□□□□ 0.03
UBE3B-209ENST00000539584 HSD3B7Q9H2F3 369 aa15.27■□□□□ 0.03
UBE3B-209ENST00000539584 GPHNQ9NQX3 736 aaPredicted RBP15.27■□□□□ 0.03
UBE3B-209ENST00000539584 DNAI1Q9UI46 699 aa15.27■□□□□ 0.03
UBE3B-209ENST00000539584 KCPQ6ZWJ8 1503 aa15.27■□□□□ 0.03
UBE3B-209ENST00000539584 EFCAB8A8MWE9 144 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 BIN1O00499 593 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 LIFRP42702 1097 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 ZAP70P43403 619 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 ALX1Q15699 326 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 TAF7LQ5H9L4 462 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 SHC4Q6S5L8 630 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 TRIML1Q8N9V2 468 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 ZCRB1Q8TBF4 217 aaKnown RBP15.26■□□□□ 0.03
UBE3B-209ENST00000539584 UBXN4Q92575 508 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 FBXW7Q969H0 707 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 MAP3K14Q99558 947 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 MTA3Q9BTC8 594 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 TNS2Q63HR2 1409 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 C4AP0C0L4 1744 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 C4BP0C0L5 1744 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-209ENST00000539584 CFAP100Q494V2 611 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 APOA5Q6Q788 366 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 KRBA2Q6ZNG9 492 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 ZBTB38Q8NAP3 1195 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-209ENST00000539584 BCL11BQ9C0K0 894 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-209ENST00000539584 ZBTB3Q9H5J0 574 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 CDHR2Q9BYE9 1310 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 PAPPAQ13219 1627 aa15.26■□□□□ 0.03
UBE3B-209ENST00000539584 NID2Q14112 1375 aa15.25■□□□□ 0.03
UBE3B-209ENST00000539584 MROH7-TTC4A0A0A0MT08 1334 aa15.25■□□□□ 0.03
UBE3B-209ENST00000539584 STX10O60499 249 aa15.25■□□□□ 0.03
UBE3B-209ENST00000539584 A1BGP04217 495 aa15.25■□□□□ 0.03
UBE3B-209ENST00000539584 IARSP41252 1262 aaKnown RBP15.25■□□□□ 0.03
UBE3B-209ENST00000539584 ERCC6LQ2NKX8 1250 aa15.25■□□□□ 0.03
UBE3B-209ENST00000539584 KANK3Q6NY19 840 aa15.25■□□□□ 0.03
UBE3B-209ENST00000539584 CNNM3Q8NE01 707 aa15.25■□□□□ 0.03
UBE3B-209ENST00000539584 ZBTB43O43298 467 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 PPFIA3O75145 1194 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 ADRA2BP18089 450 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 MARCKSP29966 332 aaPredicted RBP15.24■□□□□ 0.03
UBE3B-209ENST00000539584 ADORA1P30542 326 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 NT5DC1Q5TFE4 455 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 TRIM65Q6PJ69 517 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 KRI1Q8N9T8 703 aaKnown RBP15.24■□□□□ 0.03
UBE3B-209ENST00000539584 MLKLQ8NB16 471 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 CCDC34Q96HJ3 373 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 KCNH3Q9ULD8 1083 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 RCAN1P53805 252 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 TMCO3Q6UWJ1 677 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 ZNF579Q8NAF0 562 aaKnown RBP15.24■□□□□ 0.03
UBE3B-209ENST00000539584 MNS1Q8NEH6 495 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.24■□□□□ 0.03
UBE3B-209ENST00000539584 CNNM2Q9H8M5 875 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 TBC1D2BQ9UPU7 963 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 RIPOR2Q9Y4F9 1068 aa15.24■□□□□ 0.03
UBE3B-209ENST00000539584 UQCRFS1P1P0C7P4 283 aa15.23■□□□□ 0.03
UBE3B-209ENST00000539584 SAFBQ15424 915 aaKnown RBP eCLIP15.23■□□□□ 0.03
UBE3B-209ENST00000539584 NTRK3Q16288 839 aa15.23■□□□□ 0.03
UBE3B-209ENST00000539584 ARHGAP29Q52LW3 1261 aa15.23■□□□□ 0.03
UBE3B-209ENST00000539584 KIF6Q6ZMV9 814 aa15.23■□□□□ 0.03
UBE3B-209ENST00000539584 REXO1L1PQ8IX06 675 aa15.23■□□□□ 0.03
UBE3B-209ENST00000539584 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.23■□□□□ 0.03
UBE3B-209ENST00000539584 V9GYY5 206 aaPredicted RBP15.23■□□□□ 0.03
UBE3B-209ENST00000539584 WDR17Q8IZU2 1322 aa15.23■□□□□ 0.03
UBE3B-209ENST00000539584 ATP1A3P13637 1013 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 TUBB4BP68371 445 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 SCARF1Q14162 830 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 HSP90AB3PQ58FF7 597 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 RILPL1Q5EBL4 403 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 ENOX1Q8TC92 643 aaKnown RBP15.22■□□□□ 0.03
UBE3B-209ENST00000539584 IGDCC4Q8TDY8 1250 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 ZNF446Q9NWS9 450 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 MYH7P12883 1935 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 SPATA31A3Q5VYP0 1347 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 ZRANB2O95218 330 aaKnown RBP eCLIP15.22■□□□□ 0.03
UBE3B-209ENST00000539584 CLCN6P51797 869 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 SSRP1Q08945 709 aaKnown RBP15.22■□□□□ 0.03
UBE3B-209ENST00000539584 TBX2Q13207 712 aaPredicted RBP15.22■□□□□ 0.03
UBE3B-209ENST00000539584 METTL24Q5JXM2 366 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 SLC9C2Q5TAH2 1124 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 METTL16Q86W50 562 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms