RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 IFNKQ9P0W0 207 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 C4AP0C0L4 1744 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 C4BP0C0L5 1744 aa13.89□□□□□ -0.19
CPNE8-203ENST00000538596 ZMYM6O95789 1325 aa13.88□□□□□ -0.19
CPNE8-203ENST00000538596 SMC2O95347 1197 aa13.88□□□□□ -0.19
CPNE8-203ENST00000538596 U2AF2P26368 475 aaKnown RBP eCLIP13.88□□□□□ -0.19
CPNE8-203ENST00000538596 RBM6P78332 1123 aaKnown RBP13.88□□□□□ -0.19
CPNE8-203ENST00000538596 CTDSPL2Q05D32 466 aa13.88□□□□□ -0.19
CPNE8-203ENST00000538596 KRT40Q6A162 431 aa13.88□□□□□ -0.19
CPNE8-203ENST00000538596 APOA5Q6Q788 366 aa13.88□□□□□ -0.19
CPNE8-203ENST00000538596 CLIC6Q96NY7 704 aa13.88□□□□□ -0.19
CPNE8-203ENST00000538596 TACC3Q9Y6A5 838 aa13.88□□□□□ -0.19
CPNE8-203ENST00000538596 DDX60Q8IY21 1712 aaKnown RBP13.88□□□□□ -0.19
CPNE8-203ENST00000538596 CDHR2Q9BYE9 1310 aa13.87□□□□□ -0.19
CPNE8-203ENST00000538596 RANBP6O60518 1105 aaKnown RBP13.87□□□□□ -0.19
CPNE8-203ENST00000538596 CYP19A1P11511 503 aaPredicted RBP13.87□□□□□ -0.19
CPNE8-203ENST00000538596 TEX13AQ9BXU3 409 aaPredicted RBP13.87□□□□□ -0.19
CPNE8-203ENST00000538596 UBN2Q6ZU65 1347 aa13.87□□□□□ -0.19
CPNE8-203ENST00000538596 TCRBV5S4A2TA0A5A2 114 aa13.87□□□□□ -0.19
CPNE8-203ENST00000538596 CMA1P23946 247 aa13.87□□□□□ -0.19
CPNE8-203ENST00000538596 SLC39A14Q15043 492 aa13.87□□□□□ -0.19
CPNE8-203ENST00000538596 PTPN21Q16825 1174 aa13.87□□□□□ -0.19
CPNE8-203ENST00000538596 NFXL1Q6ZNB6 911 aa13.87□□□□□ -0.19
CPNE8-203ENST00000538596 CCDC112Q8NEF3 446 aa13.87□□□□□ -0.19
CPNE8-203ENST00000538596 AIDAQ96BJ3 306 aa13.87□□□□□ -0.19
CPNE8-203ENST00000538596 ATP1A3P13637 1013 aa13.86□□□□□ -0.19
CPNE8-203ENST00000538596 LMOD1P29536 600 aaPredicted RBP13.86□□□□□ -0.19
CPNE8-203ENST00000538596 NCAPHQ15003 741 aa13.86□□□□□ -0.19
CPNE8-203ENST00000538596 SHC4Q6S5L8 630 aa13.86□□□□□ -0.19
CPNE8-203ENST00000538596 TMC6Q7Z403 805 aa13.86□□□□□ -0.19
CPNE8-203ENST00000538596 IGDCC4Q8TDY8 1250 aa13.86□□□□□ -0.19
CPNE8-203ENST00000538596 STRBPQ96SI9 672 aaKnown RBP13.86□□□□□ -0.19
CPNE8-203ENST00000538596 EPB41L4AQ9HCS5 686 aaPredicted RBP13.86□□□□□ -0.19
CPNE8-203ENST00000538596 FAM217BQ9NTX9 383 aaPredicted RBP13.86□□□□□ -0.19
CPNE8-203ENST00000538596 BTG4Q9NY30 223 aa13.86□□□□□ -0.19
CPNE8-203ENST00000538596 ABCC12Q96J65 1359 aa13.86□□□□□ -0.19
CPNE8-203ENST00000538596 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.86□□□□□ -0.19
CPNE8-203ENST00000538596 GNL2Q13823 731 aaKnown RBP13.86□□□□□ -0.19
CPNE8-203ENST00000538596 UBE3CQ15386 1083 aa13.86□□□□□ -0.19
CPNE8-203ENST00000538596 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.86□□□□□ -0.19
CPNE8-203ENST00000538596 V9GYY5 206 aaPredicted RBP13.86□□□□□ -0.19
CPNE8-203ENST00000538596 ZBTB43O43298 467 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 NLRP12P59046 1061 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 TTF1Q15361 905 aaPredicted RBP13.85□□□□□ -0.19
CPNE8-203ENST00000538596 PTPN14Q15678 1187 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 NTRK3Q16288 839 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 SPECC1Q5M775 1068 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 ARMCX5Q6P1M9 558 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 NYAP1Q6ZVC0 841 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 CCAR2Q8N163 923 aaKnown RBP13.85□□□□□ -0.19
CPNE8-203ENST00000538596 MAGEB6Q8N7X4 407 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 ZKSCAN3Q9BRR0 538 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 ARMT1Q9H993 441 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 LY9Q9HBG7 655 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 WDR19Q8NEZ3 1342 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 PRKAB2O43741 272 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 NEMFO60524 1076 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 MBD4O95243 580 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 SYKP43405 635 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 PNOCQ13519 176 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 TMEM67Q5HYA8 995 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 CCDC82Q8N4S0 544 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 ZSWIM5Q9P217 1185 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 PAXBP1Q9Y5B6 917 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 GOLGA8AA7E2F4 631 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 GUCY1A2P33402 732 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 RASGRF1Q13972 1273 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 PTPAQ15257 358 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 CMTR1Q8N1G2 835 aaKnown RBP13.85□□□□□ -0.19
CPNE8-203ENST00000538596 SEC31BQ9NQW1 1179 aa13.85□□□□□ -0.19
CPNE8-203ENST00000538596 PDE8AO60658 829 aa13.84□□□□□ -0.19
CPNE8-203ENST00000538596 ARID4AP29374 1257 aaPredicted RBP13.84□□□□□ -0.19
CPNE8-203ENST00000538596 IARSP41252 1262 aaKnown RBP13.84□□□□□ -0.19
CPNE8-203ENST00000538596 RRP12Q5JTH9 1297 aaKnown RBP13.84□□□□□ -0.19
CPNE8-203ENST00000538596 DZIP3Q86Y13 1208 aaKnown RBP13.84□□□□□ -0.19
CPNE8-203ENST00000538596 ZNF512BQ96KM6 892 aaPredicted RBP13.84□□□□□ -0.19
CPNE8-203ENST00000538596 MAP3K14Q99558 947 aa13.84□□□□□ -0.19
CPNE8-203ENST00000538596 SLC26A6Q9BXS9 759 aa13.84□□□□□ -0.19
CPNE8-203ENST00000538596 HSD3B7Q9H2F3 369 aa13.84□□□□□ -0.19
CPNE8-203ENST00000538596 ITGB4P16144 1822 aa13.84□□□□□ -0.19
CPNE8-203ENST00000538596 MYH3P11055 1940 aa13.84□□□□□ -0.19
CPNE8-203ENST00000538596 A0A0G2JS52 829 aa13.84□□□□□ -0.19
CPNE8-203ENST00000538596 IFNL3Q8IZI9 196 aa13.84□□□□□ -0.19
CPNE8-203ENST00000538596 SPATA5Q8NB90 893 aa13.84□□□□□ -0.19
CPNE8-203ENST00000538596 ATRNO75882 1429 aa13.84□□□□□ -0.19
CPNE8-203ENST00000538596 ABCA3Q99758 1704 aa13.83□□□□□ -0.2
CPNE8-203ENST00000538596 FOXN1O15353 648 aa13.83□□□□□ -0.2
CPNE8-203ENST00000538596 PUM3Q15397 648 aaKnown RBP13.83□□□□□ -0.2
CPNE8-203ENST00000538596 BPIFA3Q9BQP9 254 aa13.83□□□□□ -0.2
CPNE8-203ENST00000538596 OSBPL5Q9H0X9 879 aaPredicted RBP13.83□□□□□ -0.2
CPNE8-203ENST00000538596 TOMM22Q9NS69 142 aa13.83□□□□□ -0.2
CPNE8-203ENST00000538596 IFIT3O14879 490 aaKnown RBP13.83□□□□□ -0.2
CPNE8-203ENST00000538596 FGFR2P21802 821 aa13.83□□□□□ -0.2
CPNE8-203ENST00000538596 E4F1Q66K89 784 aaPredicted RBP13.83□□□□□ -0.2
CPNE8-203ENST00000538596 LPIN2Q92539 896 aa13.83□□□□□ -0.2
CPNE8-203ENST00000538596 DPF2Q92785 391 aa13.83□□□□□ -0.2
CPNE8-203ENST00000538596 NAPBQ9H115 298 aa13.83□□□□□ -0.2
CPNE8-203ENST00000538596 ZNF215Q9UL58 517 aaPredicted RBP13.83□□□□□ -0.2
CPNE8-203ENST00000538596 HPSEQ9Y251 543 aa13.83□□□□□ -0.2
CPNE8-203ENST00000538596 NUP98P52948 1817 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms