RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CYP19A1P11511 503 aaPredicted RBP16.6■□□□□ 0.25
USP44-203ENST00000537435 CPLX2Q6PUV4 134 aaKnown RBP16.6■□□□□ 0.25
USP44-203ENST00000537435 CCDC112Q8NEF3 446 aa16.6■□□□□ 0.25
USP44-203ENST00000537435 ZNF592Q92610 1267 aa16.6■□□□□ 0.25
USP44-203ENST00000537435 C4AP0C0L4 1744 aa16.59■□□□□ 0.25
USP44-203ENST00000537435 C4BP0C0L5 1744 aa16.59■□□□□ 0.25
USP44-203ENST00000537435 TCRBV5S4A2TA0A5A2 114 aa16.59■□□□□ 0.25
USP44-203ENST00000537435 UQCRFS1P1P0C7P4 283 aa16.59■□□□□ 0.25
USP44-203ENST00000537435 GSDMDP57764 484 aa16.59■□□□□ 0.25
USP44-203ENST00000537435 NCBP1Q09161 790 aaKnown RBP16.59■□□□□ 0.25
USP44-203ENST00000537435 AIDAQ96BJ3 306 aa16.59■□□□□ 0.25
USP44-203ENST00000537435 TMEM87BQ96K49 555 aa16.59■□□□□ 0.25
USP44-203ENST00000537435 STRBPQ96SI9 672 aaKnown RBP16.59■□□□□ 0.25
USP44-203ENST00000537435 SMC2O95347 1197 aa16.59■□□□□ 0.25
USP44-203ENST00000537435 NFXL1Q6ZNB6 911 aa16.59■□□□□ 0.25
USP44-203ENST00000537435 HELBQ8NG08 1087 aaPredicted RBP16.59■□□□□ 0.25
USP44-203ENST00000537435 IGDCC4Q8TDY8 1250 aa16.59■□□□□ 0.25
USP44-203ENST00000537435 XPO4Q9C0E2 1151 aaKnown RBP16.59■□□□□ 0.25
USP44-203ENST00000537435 OSBPL5Q9H0X9 879 aaPredicted RBP16.59■□□□□ 0.25
USP44-203ENST00000537435 IFNKQ9P0W0 207 aa16.59■□□□□ 0.25
USP44-203ENST00000537435 ZBTB43O43298 467 aa16.58■□□□□ 0.25
USP44-203ENST00000537435 GNL2Q13823 731 aaKnown RBP16.58■□□□□ 0.25
USP44-203ENST00000537435 PTPN14Q15678 1187 aa16.58■□□□□ 0.25
USP44-203ENST00000537435 INCENPQ9NQS7 918 aa16.58■□□□□ 0.25
USP44-203ENST00000537435 TRMT1Q9NXH9 659 aaKnown RBP16.58■□□□□ 0.25
USP44-203ENST00000537435 GOLGA8AA7E2F4 631 aa16.58■□□□□ 0.24
USP44-203ENST00000537435 SYKP43405 635 aa16.58■□□□□ 0.24
USP44-203ENST00000537435 PUM3Q15397 648 aaKnown RBP16.58■□□□□ 0.24
USP44-203ENST00000537435 NYAP1Q6ZVC0 841 aa16.58■□□□□ 0.24
USP44-203ENST00000537435 LPIN2Q92539 896 aa16.58■□□□□ 0.24
USP44-203ENST00000537435 MYL10Q9BUA6 226 aa16.58■□□□□ 0.24
USP44-203ENST00000537435 LY9Q9HBG7 655 aa16.58■□□□□ 0.24
USP44-203ENST00000537435 IMPACTQ9P2X3 320 aa16.58■□□□□ 0.24
USP44-203ENST00000537435 ABCA3Q99758 1704 aa16.57■□□□□ 0.24
USP44-203ENST00000537435 PPP6R2O75170 966 aa16.57■□□□□ 0.24
USP44-203ENST00000537435 IARSP41252 1262 aaKnown RBP16.57■□□□□ 0.24
USP44-203ENST00000537435 TPM4P67936 248 aa16.57■□□□□ 0.24
USP44-203ENST00000537435 NCAPHQ15003 741 aa16.57■□□□□ 0.24
USP44-203ENST00000537435 SYCP1Q15431 976 aa16.57■□□□□ 0.24
USP44-203ENST00000537435 NTRK3Q16288 839 aa16.57■□□□□ 0.24
USP44-203ENST00000537435 TMEM67Q5HYA8 995 aa16.57■□□□□ 0.24
USP44-203ENST00000537435 ISM2Q6H9L7 571 aa16.57■□□□□ 0.24
USP44-203ENST00000537435 UBN2Q6ZU65 1347 aa16.57■□□□□ 0.24
USP44-203ENST00000537435 RANBP6O60518 1105 aaKnown RBP16.57■□□□□ 0.24
USP44-203ENST00000537435 FGFR2P21802 821 aa16.57■□□□□ 0.24
USP44-203ENST00000537435 PTPAQ15257 358 aa16.57■□□□□ 0.24
USP44-203ENST00000537435 SHC4Q6S5L8 630 aa16.57■□□□□ 0.24
USP44-203ENST00000537435 CCAR2Q8N163 923 aaKnown RBP16.57■□□□□ 0.24
USP44-203ENST00000537435 TIGD1Q96MW7 591 aa16.57■□□□□ 0.24
USP44-203ENST00000537435 EPB41L4AQ9HCS5 686 aaPredicted RBP16.57■□□□□ 0.24
USP44-203ENST00000537435 FAM217BQ9NTX9 383 aaPredicted RBP16.57■□□□□ 0.24
USP44-203ENST00000537435 ALX1Q15699 326 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 TMC6Q7Z403 805 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 SGMS1Q86VZ5 419 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 DZIP3Q86Y13 1208 aaKnown RBP16.56■□□□□ 0.24
USP44-203ENST00000537435 SMAP1Q8IYB5 467 aaPredicted RBP16.56■□□□□ 0.24
USP44-203ENST00000537435 JMYQ8N9B5 988 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 NAPBQ9H115 298 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 BTG4Q9NY30 223 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 HPSEQ9Y251 543 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 PATL2C9JE40 543 aaKnown RBP16.56■□□□□ 0.24
USP44-203ENST00000537435 CBX1P83916 185 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 CTDSPL2Q05D32 466 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 TRIM29Q14134 588 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 IFNL3Q8IZI9 196 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 MAGEB6Q8N7X4 407 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 SPATA5Q8NB90 893 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 MAP3K14Q99558 947 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 MROH5Q6ZUA9 1318 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 LRP6O75581 1613 aa16.56■□□□□ 0.24
USP44-203ENST00000537435 UBE2Q2LH0YL09 131 aa16.55■□□□□ 0.24
USP44-203ENST00000537435 SNAP23O00161 211 aa16.55■□□□□ 0.24
USP44-203ENST00000537435 BCL9O00512 1426 aa16.55■□□□□ 0.24
USP44-203ENST00000537435 MBD4O95243 580 aa16.55■□□□□ 0.24
USP44-203ENST00000537435 NAA30Q147X3 362 aaPredicted RBP16.55■□□□□ 0.24
USP44-203ENST00000537435 SYTL4Q96C24 671 aaPredicted RBP16.55■□□□□ 0.24
USP44-203ENST00000537435 CLIC6Q96NY7 704 aa16.55■□□□□ 0.24
USP44-203ENST00000537435 ZSWIM5Q9P217 1185 aa16.55■□□□□ 0.24
USP44-203ENST00000537435 TUBE1Q9UJT0 475 aa16.55■□□□□ 0.24
USP44-203ENST00000537435 ERVV-1B6SEH8 477 aa16.55■□□□□ 0.24
USP44-203ENST00000537435 IFIT3O14879 490 aaKnown RBP16.55■□□□□ 0.24
USP44-203ENST00000537435 U2AF2P26368 475 aaKnown RBP eCLIP16.55■□□□□ 0.24
USP44-203ENST00000537435 KCND1Q9NSA2 647 aa16.55■□□□□ 0.24
USP44-203ENST00000537435 SLC12A7Q9Y666 1083 aa16.55■□□□□ 0.24
USP44-203ENST00000537435 SLC5A1P13866 664 aa16.54■□□□□ 0.24
USP44-203ENST00000537435 LMOD1P29536 600 aaPredicted RBP16.54■□□□□ 0.24
USP44-203ENST00000537435 LIFRP42702 1097 aa16.54■□□□□ 0.24
USP44-203ENST00000537435 MAP3K12Q12852 859 aa16.54■□□□□ 0.24
USP44-203ENST00000537435 RASGRF1Q13972 1273 aa16.54■□□□□ 0.24
USP44-203ENST00000537435 ARMCX5Q6P1M9 558 aa16.54■□□□□ 0.24
USP44-203ENST00000537435 ZNF34Q8IZ26 560 aa16.54■□□□□ 0.24
USP44-203ENST00000537435 CCDC150Q8NCX0 1101 aa16.54■□□□□ 0.24
USP44-203ENST00000537435 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.54■□□□□ 0.24
USP44-203ENST00000537435 SLC26A6Q9BXS9 759 aa16.54■□□□□ 0.24
USP44-203ENST00000537435 ARMT1Q9H993 441 aa16.54■□□□□ 0.24
USP44-203ENST00000537435 TACC3Q9Y6A5 838 aa16.54■□□□□ 0.24
USP44-203ENST00000537435 MYO5AQ9Y4I1 1855 aaKnown RBP16.54■□□□□ 0.24
USP44-203ENST00000537435 IKBKBO14920 756 aa16.54■□□□□ 0.24
USP44-203ENST00000537435 SSRP1Q08945 709 aaKnown RBP16.54■□□□□ 0.24
USP44-203ENST00000537435 PRDM10Q9NQV6 1147 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms