RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 NMIQ13287 307 aaPredicted RBP4.57□□□□□ -1.68
SOX6-217ENST00000533870 TMEM266Q2M3C6 531 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 CEP85LQ5SZL2 805 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 SOGA3Q5TF21 947 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 EIF1ADQ8N9N8 165 aaKnown RBP4.57□□□□□ -1.68
SOX6-217ENST00000533870 THUMPD2Q9BTF0 503 aaKnown RBP4.57□□□□□ -1.68
SOX6-217ENST00000533870 FUCA2Q9BTY2 467 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 STRN4Q9NRL3 753 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 ABCA8O94911 1581 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 CCDC194A0A1B0GVG4 234 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 H7C1D1 291 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 SLC27A2O14975 620 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 SMARCA5O60264 1052 aaPredicted RBP4.57□□□□□ -1.68
SOX6-217ENST00000533870 LDHCP07864 332 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 SNRPA1P09661 255 aaKnown RBP4.57□□□□□ -1.68
SOX6-217ENST00000533870 EIF3BP55884 814 aaKnown RBP4.57□□□□□ -1.68
SOX6-217ENST00000533870 CETN1Q12798 172 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 NECTIN1Q15223 517 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 TPRNQ4KMQ1 711 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 NBPF10Q6P3W6 841 aaKnown RBP4.57□□□□□ -1.68
SOX6-217ENST00000533870 LMNTD2Q8IXW0 634 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 ESR2Q92731 530 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 PHACTR3Q96KR7 559 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 NUP88Q99567 741 aaPredicted RBP4.57□□□□□ -1.68
SOX6-217ENST00000533870 SELENOOQ9BVL4 669 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 XPO4Q9C0E2 1151 aaKnown RBP4.57□□□□□ -1.68
SOX6-217ENST00000533870 HYOU1Q9Y4L1 999 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 hCG_1984214I3L0E3 225 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 EYA2O00167 538 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 UBA7P41226 1012 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 LIFRP42702 1097 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 DNM2P50570 870 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 LACTBP83111 547 aaPredicted RBP4.57□□□□□ -1.68
SOX6-217ENST00000533870 ZNF713Q8N859 430 aaPredicted RBP4.57□□□□□ -1.68
SOX6-217ENST00000533870 LINC00301Q8NCQ3 95 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 ADAM21Q9UKJ8 722 aa4.57□□□□□ -1.68
SOX6-217ENST00000533870 NCAPD2Q15021 1401 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 PTPRUQ92729 1446 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 SEPT2Q15019 361 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 CCDC40Q4G0X9 1142 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 TTC39AQ5SRH9 613 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 IGSF22Q8N9C0 903 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 FBF1Q8TES7 1133 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 APPBP2Q92624 585 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 RUNDC3BQ96NL0 473 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 SAMD15Q9P1V8 674 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 ATP10DQ9P241 1426 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 LMOD1P29536 600 aaPredicted RBP4.56□□□□□ -1.68
SOX6-217ENST00000533870 MCM6Q14566 821 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 ATP2B3Q16720 1220 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 MSANTD4Q8NCY6 345 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 WHAMMQ8TF30 809 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 FEZ2Q9UHY8 353 aaPredicted RBP4.56□□□□□ -1.68
SOX6-217ENST00000533870 SAR1BQ9Y6B6 198 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 ARHGEF40Q8TER5 1519 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 RPS6KA5O75582 802 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 RESTQ13127 1097 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 ZKSCAN8Q15776 578 aaPredicted RBP4.56□□□□□ -1.68
SOX6-217ENST00000533870 USP37Q86T82 979 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 SRLQ86TD4 932 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 ALG1Q9BT22 464 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 HOMER3Q9NSC5 361 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 UGGT1Q9NYU2 1555 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 CCDC169A6NNP5 214 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 CCDC188H7C350 402 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 NPHP1O15259 732 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 SLFN14P0C7P3 912 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 TSNAXIP1Q2TAA8 658 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 SPECC1Q5M775 1068 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 GKAP1Q5VSY0 366 aaPredicted RBP4.56□□□□□ -1.68
SOX6-217ENST00000533870 KRBA2Q6ZNG9 492 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 MCM10Q7L590 875 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 ANKLE2Q86XL3 938 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 SUGP1Q8IWZ8 645 aaKnown RBP4.56□□□□□ -1.68
SOX6-217ENST00000533870 IFNL2Q8IZJ0 200 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 MICALL1Q8N3F8 863 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 C1orf131Q8NDD1 294 aaKnown RBP4.56□□□□□ -1.68
SOX6-217ENST00000533870 MAIP1Q8WWC4 291 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 CCDC114Q96M63 670 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 VCXQ9H320 206 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 PHF8Q9UPP1 1060 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 CCDC9Q9Y3X0 531 aaKnown RBP4.56□□□□□ -1.68
SOX6-217ENST00000533870 PXDNLA1KZ92 1463 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 IQSEC2Q5JU85 1478 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 STK36Q9NRP7 1315 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 PRC1O43663 620 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 ACTN4O43707 911 aaKnown RBP4.56□□□□□ -1.68
SOX6-217ENST00000533870 ABCB7O75027 752 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 PPP1R2P3Q6NXS1 205 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 WDR93Q6P2C0 686 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 MAATS1Q7Z4T9 603 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 SIRT2Q8IXJ6 389 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 ARHGAP24Q8N264 748 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 FBXL16Q8N461 479 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 CDK5RAP3Q96JB5 506 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 NAPBQ9H115 298 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 VPS18Q9P253 973 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 ANGEL1Q9UNK9 670 aaKnown RBP4.56□□□□□ -1.68
SOX6-217ENST00000533870 NRXN1Q9ULB1 1477 aa4.56□□□□□ -1.68
SOX6-217ENST00000533870 A0A1W2PQC6 194 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms