RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 KBTBD3Q8NAB2 608 aa13.32□□□□□ -0.28
CAPN1-218ENST00000530442 TDRD3Q9H7E2 651 aaKnown RBP13.32□□□□□ -0.28
CAPN1-218ENST00000530442 GPR75-ASB3A0A0A6YYF3 556 aa13.31□□□□□ -0.28
CAPN1-218ENST00000530442 TCRBV5S4A2TA0A5A2 114 aa13.31□□□□□ -0.28
CAPN1-218ENST00000530442 MYO1BO43795 1136 aa13.31□□□□□ -0.28
CAPN1-218ENST00000530442 ADD2P35612 726 aa13.31□□□□□ -0.28
CAPN1-218ENST00000530442 CACNB3P54284 484 aa13.31□□□□□ -0.28
CAPN1-218ENST00000530442 SLFNL1Q499Z3 407 aa13.31□□□□□ -0.28
CAPN1-218ENST00000530442 CDC42EP5Q6NZY7 148 aa13.31□□□□□ -0.28
CAPN1-218ENST00000530442 GLIS2Q9BZE0 524 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-218ENST00000530442 VEZTQ9HBM0 779 aa13.31□□□□□ -0.28
CAPN1-218ENST00000530442 ZNF70Q9UC06 446 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-218ENST00000530442 PAPPA2Q9BXP8 1791 aa13.3□□□□□ -0.28
CAPN1-218ENST00000530442 SIPA1L1O43166 1804 aa13.3□□□□□ -0.28
CAPN1-218ENST00000530442 SSC5DA1L4H1 1573 aa13.3□□□□□ -0.28
CAPN1-218ENST00000530442 ITGBL1O95965 494 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-218ENST00000530442 GSPT1P15170 499 aaKnown RBP13.3□□□□□ -0.28
CAPN1-218ENST00000530442 CYP7A1P22680 504 aa13.3□□□□□ -0.28
CAPN1-218ENST00000530442 RHBDL3P58872 404 aa13.3□□□□□ -0.28
CAPN1-218ENST00000530442 FSTL1Q12841 308 aa13.3□□□□□ -0.28
CAPN1-218ENST00000530442 SLC9C2Q5TAH2 1124 aa13.3□□□□□ -0.28
CAPN1-218ENST00000530442 DLK2Q6UY11 383 aa13.3□□□□□ -0.28
CAPN1-218ENST00000530442 KRT26Q7Z3Y9 468 aa13.3□□□□□ -0.28
CAPN1-218ENST00000530442 APOBEC3FQ8IUX4 373 aaKnown RBP13.3□□□□□ -0.28
CAPN1-218ENST00000530442 CNTROBQ8N137 903 aa13.3□□□□□ -0.28
CAPN1-218ENST00000530442 DCPSQ96C86 337 aaKnown RBP13.3□□□□□ -0.28
CAPN1-218ENST00000530442 AATFQ9NY61 560 aaKnown RBP eCLIP13.3□□□□□ -0.286e-6■■■■■ 54.7
CAPN1-218ENST00000530442 PASKQ96RG2 1323 aa13.3□□□□□ -0.28
CAPN1-218ENST00000530442 ZNF532Q9HCE3 1301 aa13.3□□□□□ -0.28
CAPN1-218ENST00000530442 CNTNAP1P78357 1384 aa13.3□□□□□ -0.28
CAPN1-218ENST00000530442 OTOFQ9HC10 1997 aa13.29□□□□□ -0.28
CAPN1-218ENST00000530442 TRAF5O00463 557 aa13.29□□□□□ -0.28
CAPN1-218ENST00000530442 LDHCP07864 332 aa13.29□□□□□ -0.28
CAPN1-218ENST00000530442 FMR1Q06787 632 aaKnown RBP eCLIP13.29□□□□□ -0.28
CAPN1-218ENST00000530442 NFIAQ12857 509 aa13.29□□□□□ -0.28
CAPN1-218ENST00000530442 TTC22Q5TAA0 569 aa13.29□□□□□ -0.28
CAPN1-218ENST00000530442 TMED8Q6PL24 325 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-218ENST00000530442 CDC37L1Q7L3B6 337 aa13.29□□□□□ -0.28
CAPN1-218ENST00000530442 SULF1Q8IWU6 871 aa13.29□□□□□ -0.28
CAPN1-218ENST00000530442 MIGA1Q8NAN2 632 aa13.29□□□□□ -0.28
CAPN1-218ENST00000530442 FSD1Q9BTV5 496 aa13.29□□□□□ -0.28
CAPN1-218ENST00000530442 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.29□□□□□ -0.284e-8■■■■□ 22.5
CAPN1-218ENST00000530442 MYH1P12882 1939 aa13.29□□□□□ -0.28
CAPN1-218ENST00000530442 TCP10L2B9ZVM9 353 aa13.28□□□□□ -0.28
CAPN1-218ENST00000530442 WDHD1O75717 1129 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-218ENST00000530442 DYNLL1P63167 89 aaKnown RBP13.28□□□□□ -0.28
CAPN1-218ENST00000530442 UBE3CQ15386 1083 aa13.28□□□□□ -0.28
CAPN1-218ENST00000530442 USP48Q86UV5 1035 aa13.28□□□□□ -0.28
CAPN1-218ENST00000530442 EVI5LQ96CN4 794 aa13.28□□□□□ -0.28
CAPN1-218ENST00000530442 RIOK1Q9BRS2 568 aaKnown RBP13.28□□□□□ -0.28
CAPN1-218ENST00000530442 USP40Q9NVE5 1235 aa13.28□□□□□ -0.28
CAPN1-218ENST00000530442 RPAP1Q9BWH6 1393 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-218ENST00000530442 LAMB1P07942 1786 aa13.27□□□□□ -0.28
CAPN1-218ENST00000530442 BAZ2AQ9UIF9 1905 aaKnown RBP13.27□□□□□ -0.28
CAPN1-218ENST00000530442 TRIM6-TRIM34B2RNG4 842 aa13.27□□□□□ -0.29
CAPN1-218ENST00000530442 PPP4CP60510 307 aa13.27□□□□□ -0.29
CAPN1-218ENST00000530442 TNFAIP1Q13829 316 aa13.27□□□□□ -0.29
CAPN1-218ENST00000530442 FKBP1CQ5VVH2 108 aa13.27□□□□□ -0.29
CAPN1-218ENST00000530442 ZSCAN25Q6NSZ9 544 aa13.27□□□□□ -0.29
CAPN1-218ENST00000530442 CDAN1Q8IWY9 1227 aa13.27□□□□□ -0.29
CAPN1-218ENST00000530442 SH3RF3Q8TEJ3 882 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-218ENST00000530442 CDCA5Q96FF9 252 aa13.27□□□□□ -0.29
CAPN1-218ENST00000530442 IDI2Q9BXS1 227 aa13.27□□□□□ -0.29
CAPN1-218ENST00000530442 DEFB129Q9H1M3 183 aa13.27□□□□□ -0.29
CAPN1-218ENST00000530442 DDX4Q9NQI0 724 aaKnown RBP13.27□□□□□ -0.29
CAPN1-218ENST00000530442 TMOD2Q9NZR1 351 aa13.27□□□□□ -0.29
CAPN1-218ENST00000530442 FAM198AQ9UFP1 575 aa13.27□□□□□ -0.29
CAPN1-218ENST00000530442 RNF113AO15541 343 aaKnown RBP13.26□□□□□ -0.29
CAPN1-218ENST00000530442 BAG3O95817 575 aa13.26□□□□□ -0.29
CAPN1-218ENST00000530442 COL2A1P02458 1487 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-218ENST00000530442 RGS3P49796 1198 aa13.26□□□□□ -0.29
CAPN1-218ENST00000530442 C1QTNF8P60827 252 aa13.26□□□□□ -0.29
CAPN1-218ENST00000530442 RASA3Q14644 834 aa13.26□□□□□ -0.29
CAPN1-218ENST00000530442 PRAMEF18Q5VWM3 479 aa13.26□□□□□ -0.29
CAPN1-218ENST00000530442 FAM83AQ86UY5 434 aa13.26□□□□□ -0.29
CAPN1-218ENST00000530442 TEX11Q8IYF3 940 aa13.26□□□□□ -0.29
CAPN1-218ENST00000530442 LCORLQ8N3X6 602 aa13.26□□□□□ -0.29
CAPN1-218ENST00000530442 APPBP2Q92624 585 aa13.26□□□□□ -0.29
CAPN1-218ENST00000530442 RILPL2Q969X0 211 aa13.26□□□□□ -0.29
CAPN1-218ENST00000530442 NOL10Q9BSC4 688 aaKnown RBP13.26□□□□□ -0.29
CAPN1-218ENST00000530442 TMEM39BQ9GZU3 492 aa13.26□□□□□ -0.29
CAPN1-218ENST00000530442 PUS7LQ9H0K6 701 aaKnown RBP13.26□□□□□ -0.29
CAPN1-218ENST00000530442 PPP2R3BQ9Y5P8 575 aa13.26□□□□□ -0.29
CAPN1-218ENST00000530442 FLT1P17948 1338 aa13.25□□□□□ -0.29
CAPN1-218ENST00000530442 MAGEB6P1A0A0J9YX57 407 aa13.25□□□□□ -0.29
CAPN1-218ENST00000530442 MBD4O95243 580 aa13.25□□□□□ -0.29
CAPN1-218ENST00000530442 ZFYP08048 801 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-218ENST00000530442 TNNI2P48788 182 aa13.25□□□□□ -0.29
CAPN1-218ENST00000530442 PICALMQ13492 652 aa13.25□□□□□ -0.29
CAPN1-218ENST00000530442 OSBP2Q969R2 916 aa13.25□□□□□ -0.29
CAPN1-218ENST00000530442 TEPSINQ96N21 525 aa13.25□□□□□ -0.29
CAPN1-218ENST00000530442 ATRNL1Q5VV63 1379 aa13.24□□□□□ -0.29
CAPN1-218ENST00000530442 M0R2C6 588 aa13.24□□□□□ -0.29
CAPN1-218ENST00000530442 PLCG2P16885 1265 aa13.24□□□□□ -0.29
CAPN1-218ENST00000530442 SDSP20132 328 aa13.24□□□□□ -0.29
CAPN1-218ENST00000530442 TCP10Q12799 353 aa13.24□□□□□ -0.29
CAPN1-218ENST00000530442 LRRFIP1Q32MZ4 808 aaKnown RBP13.24□□□□□ -0.29
CAPN1-218ENST00000530442 CERS3Q8IU89 383 aa13.24□□□□□ -0.29
CAPN1-218ENST00000530442 ZFPM1Q8IX07 1006 aa13.24□□□□□ -0.29
CAPN1-218ENST00000530442 ARMT1Q9H993 441 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms