RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 APOA5Q6Q788 366 aa21.86■■□□□ 1.09
TM9SF1-206ENST00000528669 VPS37DQ86XT2 251 aa21.86■■□□□ 1.09
TM9SF1-206ENST00000528669 CCDC112Q8NEF3 446 aa21.86■■□□□ 1.09
TM9SF1-206ENST00000528669 PAXBP1Q9Y5B6 917 aa21.86■■□□□ 1.09
TM9SF1-206ENST00000528669 UBE3CQ15386 1083 aa21.86■■□□□ 1.09
TM9SF1-206ENST00000528669 KRT40Q6A162 431 aa21.86■■□□□ 1.09
TM9SF1-206ENST00000528669 XPO4Q9C0E2 1151 aaKnown RBP21.86■■□□□ 1.09
TM9SF1-206ENST00000528669 IFNKQ9P0W0 207 aa21.86■■□□□ 1.09
TM9SF1-206ENST00000528669 ZBTB1Q9Y2K1 713 aa21.86■■□□□ 1.09
TM9SF1-206ENST00000528669 MYH3P11055 1940 aa21.85■■□□□ 1.09
TM9SF1-206ENST00000528669 UBE2Q2LH0YL09 131 aa21.85■■□□□ 1.09
TM9SF1-206ENST00000528669 CMA1P23946 247 aa21.85■■□□□ 1.09
TM9SF1-206ENST00000528669 SLC39A14Q15043 492 aa21.85■■□□□ 1.09
TM9SF1-206ENST00000528669 ABCA3Q99758 1704 aa21.85■■□□□ 1.09
TM9SF1-206ENST00000528669 NLRP12P59046 1061 aa21.85■■□□□ 1.09
TM9SF1-206ENST00000528669 GNL2Q13823 731 aaKnown RBP21.85■■□□□ 1.09
TM9SF1-206ENST00000528669 NFXL1Q6ZNB6 911 aa21.85■■□□□ 1.09
TM9SF1-206ENST00000528669 ZNF512BQ96KM6 892 aaPredicted RBP21.85■■□□□ 1.09
TM9SF1-206ENST00000528669 TBC1D2BQ9UPU7 963 aa21.85■■□□□ 1.09
TM9SF1-206ENST00000528669 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.84■■□□□ 1.09
TM9SF1-206ENST00000528669 ATRNO75882 1429 aa21.84■■□□□ 1.09
TM9SF1-206ENST00000528669 SNAP23O00161 211 aa21.84■■□□□ 1.09
TM9SF1-206ENST00000528669 AIDAQ96BJ3 306 aa21.84■■□□□ 1.09
TM9SF1-206ENST00000528669 TCRBV5S4A2TA0A5A2 114 aa21.84■■□□□ 1.09
TM9SF1-206ENST00000528669 CYP19A1P11511 503 aaPredicted RBP21.84■■□□□ 1.09
TM9SF1-206ENST00000528669 U2AF2P26368 475 aaKnown RBP eCLIP21.84■■□□□ 1.09
TM9SF1-206ENST00000528669 PTPN14Q15678 1187 aa21.84■■□□□ 1.09
TM9SF1-206ENST00000528669 SPDYE4A6NLX3 237 aa21.83■■□□□ 1.09
TM9SF1-206ENST00000528669 TMC6Q7Z403 805 aa21.83■■□□□ 1.09
TM9SF1-206ENST00000528669 IGDCC4Q8TDY8 1250 aa21.83■■□□□ 1.09
TM9SF1-206ENST00000528669 STRBPQ96SI9 672 aaKnown RBP21.83■■□□□ 1.09
TM9SF1-206ENST00000528669 BPIFA3Q9BQP9 254 aa21.83■■□□□ 1.09
TM9SF1-206ENST00000528669 ITGB4P16144 1822 aa21.83■■□□□ 1.09
TM9SF1-206ENST00000528669 ZBTB43O43298 467 aa21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 CDKL5O76039 1030 aa21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 SYKP43405 635 aa21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 CTDSPL2Q05D32 466 aa21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 NYAP1Q6ZVC0 841 aa21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 SYTL4Q96C24 671 aaPredicted RBP21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 RANBP6O60518 1105 aaKnown RBP21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 PDE8AO60658 829 aa21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 ARID4AP29374 1257 aaPredicted RBP21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 NCAPHQ15003 741 aa21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 TMEM67Q5HYA8 995 aa21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 SHC4Q6S5L8 630 aa21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 CCAR2Q8N163 923 aaKnown RBP21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 CLIC6Q96NY7 704 aa21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 LY9Q9HBG7 655 aa21.82■■□□□ 1.08
TM9SF1-206ENST00000528669 GOLGA8AA7E2F4 631 aa21.81■■□□□ 1.08
TM9SF1-206ENST00000528669 GSDMDP57764 484 aa21.81■■□□□ 1.08
TM9SF1-206ENST00000528669 CPLX2Q6PUV4 134 aaKnown RBP21.81■■□□□ 1.08
TM9SF1-206ENST00000528669 OSBPL5Q9H0X9 879 aaPredicted RBP21.81■■□□□ 1.08
TM9SF1-206ENST00000528669 UBN2Q6ZU65 1347 aa21.81■■□□□ 1.08
TM9SF1-206ENST00000528669 LMOD1P29536 600 aaPredicted RBP21.81■■□□□ 1.08
TM9SF1-206ENST00000528669 IARSP41252 1262 aaKnown RBP21.81■■□□□ 1.08
TM9SF1-206ENST00000528669 NTRK3Q16288 839 aa21.81■■□□□ 1.08
TM9SF1-206ENST00000528669 MAGEB6Q8N7X4 407 aa21.81■■□□□ 1.08
TM9SF1-206ENST00000528669 EPB41L4AQ9HCS5 686 aaPredicted RBP21.81■■□□□ 1.08
TM9SF1-206ENST00000528669 FAM217BQ9NTX9 383 aaPredicted RBP21.81■■□□□ 1.08
TM9SF1-206ENST00000528669 ECM29Q5VYK3 1845 aa21.81■■□□□ 1.08
TM9SF1-206ENST00000528669 PTPAQ15257 358 aa21.8■■□□□ 1.08
TM9SF1-206ENST00000528669 TMEM87BQ96K49 555 aa21.8■■□□□ 1.08
TM9SF1-206ENST00000528669 BTG4Q9NY30 223 aa21.8■■□□□ 1.08
TM9SF1-206ENST00000528669 TACC3Q9Y6A5 838 aa21.8■■□□□ 1.08
TM9SF1-206ENST00000528669 MBD4O95243 580 aa21.8■■□□□ 1.08
TM9SF1-206ENST00000528669 UQCRFS1P1P0C7P4 283 aa21.8■■□□□ 1.08
TM9SF1-206ENST00000528669 PUM3Q15397 648 aaKnown RBP21.8■■□□□ 1.08
TM9SF1-206ENST00000528669 ARMCX5Q6P1M9 558 aa21.8■■□□□ 1.08
TM9SF1-206ENST00000528669 SMAP1Q8IYB5 467 aaPredicted RBP21.8■■□□□ 1.08
TM9SF1-206ENST00000528669 ARMT1Q9H993 441 aa21.8■■□□□ 1.08
TM9SF1-206ENST00000528669 ZSWIM5Q9P217 1185 aa21.8■■□□□ 1.08
TM9SF1-206ENST00000528669 NUP98P52948 1817 aa21.8■■□□□ 1.08
TM9SF1-206ENST00000528669 ANKRD36CQ5JPF3 1778 aa21.8■■□□□ 1.08
TM9SF1-206ENST00000528669 DZIP3Q86Y13 1208 aaKnown RBP21.79■■□□□ 1.08
TM9SF1-206ENST00000528669 IFNL3Q8IZI9 196 aa21.79■■□□□ 1.08
TM9SF1-206ENST00000528669 STK11IPQ8N1F8 1099 aa21.79■■□□□ 1.08
TM9SF1-206ENST00000528669 LPIN2Q92539 896 aa21.79■■□□□ 1.08
TM9SF1-206ENST00000528669 MAP3K14Q99558 947 aa21.79■■□□□ 1.08
TM9SF1-206ENST00000528669 SLC26A6Q9BXS9 759 aa21.79■■□□□ 1.08
TM9SF1-206ENST00000528669 NAPBQ9H115 298 aa21.79■■□□□ 1.08
TM9SF1-206ENST00000528669 IMPACTQ9P2X3 320 aa21.79■■□□□ 1.08
TM9SF1-206ENST00000528669 LRP6O75581 1613 aa21.79■■□□□ 1.08
TM9SF1-206ENST00000528669 ATP1A3P13637 1013 aa21.79■■□□□ 1.08
TM9SF1-206ENST00000528669 TPM4P67936 248 aa21.79■■□□□ 1.08
TM9SF1-206ENST00000528669 PNOCQ13519 176 aa21.79■■□□□ 1.08
TM9SF1-206ENST00000528669 SPATA5Q8NB90 893 aa21.79■■□□□ 1.08
TM9SF1-206ENST00000528669 HPSEQ9Y251 543 aa21.79■■□□□ 1.08
TM9SF1-206ENST00000528669 IFIT3O14879 490 aaKnown RBP21.78■■□□□ 1.08
TM9SF1-206ENST00000528669 TRIM29Q14134 588 aa21.78■■□□□ 1.08
TM9SF1-206ENST00000528669 PATL2C9JE40 543 aaKnown RBP21.78■■□□□ 1.08
TM9SF1-206ENST00000528669 PPP6R2O75170 966 aa21.78■■□□□ 1.08
TM9SF1-206ENST00000528669 FGFR2P21802 821 aa21.78■■□□□ 1.08
TM9SF1-206ENST00000528669 RASGRF1Q13972 1273 aa21.78■■□□□ 1.08
TM9SF1-206ENST00000528669 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.78■■□□□ 1.08
TM9SF1-206ENST00000528669 PRKAB2O43741 272 aa21.77■■□□□ 1.08
TM9SF1-206ENST00000528669 JMYQ8N9B5 988 aa21.77■■□□□ 1.08
TM9SF1-206ENST00000528669 TIGD1Q96MW7 591 aa21.77■■□□□ 1.08
TM9SF1-206ENST00000528669 SLC12A7Q9Y666 1083 aa21.77■■□□□ 1.08
TM9SF1-206ENST00000528669 FANCCQ00597 558 aa21.77■■□□□ 1.08
TM9SF1-206ENST00000528669 SYCP1Q15431 976 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms